>ref|NM_191060.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1206

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 114/137 (83%)
 Strand = Plus / Minus

                                                                        
Query: 353  aaggacatcccaccaagcacgttgttgatgcacctgagagcaatgacggacaccttgaag 412
            |||||||| ||||| ||||||||||| ||||||| |||||||| ||||||||||||||| 
Sbjct: 1055 aaggacatgccacccagcacgttgtttatgcaccggagagcaacgacggacaccttgaac 996

                                                                        
Query: 413  accggagccggcatgacattgccaagaaggaactcgatcccattcaggctctggtaccgc 472
            ||||  | ||||  | | ||| | || ||| ||||||  || |||||  |||||||||||
Sbjct: 995  accgacggcggcgcggcgttggcgagcaggtactcgacgccgttcagcgtctggtaccgc 936

                             
Query: 473  agattgctgctgacccc 489
            || ||||||||||||||
Sbjct: 935  aggttgctgctgacccc 919

>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0432B10
          Length = 131918

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 114/137 (83%)
 Strand = Plus / Plus

                                                                         
Query: 353   aaggacatcccaccaagcacgttgttgatgcacctgagagcaatgacggacaccttgaag 412
             |||||||| ||||| ||||||||||| ||||||| |||||||| ||||||||||||||| 
Sbjct: 49456 aaggacatgccacccagcacgttgtttatgcaccggagagcaacgacggacaccttgaac 49515

                                                                         
Query: 413   accggagccggcatgacattgccaagaaggaactcgatcccattcaggctctggtaccgc 472
             ||||  | ||||  | | ||| | || ||| ||||||  || |||||  |||||||||||
Sbjct: 49516 accgacggcggcgcggcgttggcgagcaggtactcgacgccgttcagcgtctggtaccgc 49575

                              
Query: 473   agattgctgctgacccc 489
             || ||||||||||||||
Sbjct: 49576 aggttgctgctgacccc 49592

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 114/137 (83%)
 Strand = Plus / Plus

                                                                            
Query: 353      aaggacatcccaccaagcacgttgttgatgcacctgagagcaatgacggacaccttgaag 412
                |||||||| ||||| ||||||||||| ||||||| |||||||| ||||||||||||||| 
Sbjct: 34552162 aaggacatgccacccagcacgttgtttatgcaccggagagcaacgacggacaccttgaac 34552221

                                                                            
Query: 413      accggagccggcatgacattgccaagaaggaactcgatcccattcaggctctggtaccgc 472
                ||||  | ||||  | | ||| | || ||| ||||||  || |||||  |||||||||||
Sbjct: 34552222 accgacggcggcgcggcgttggcgagcaggtactcgacgccgttcagcgtctggtaccgc 34552281

                                 
Query: 473      agattgctgctgacccc 489
                || ||||||||||||||
Sbjct: 34552282 aggttgctgctgacccc 34552298

>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OSJNBa0085D07
          Length = 172483

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 114/137 (83%)
 Strand = Plus / Plus

                                                                        
Query: 353  aaggacatcccaccaagcacgttgttgatgcacctgagagcaatgacggacaccttgaag 412
            |||||||| ||||| ||||||||||| ||||||| |||||||| ||||||||||||||| 
Sbjct: 4179 aaggacatgccacccagcacgttgtttatgcaccggagagcaacgacggacaccttgaac 4238

                                                                        
Query: 413  accggagccggcatgacattgccaagaaggaactcgatcccattcaggctctggtaccgc 472
            ||||  | ||||  | | ||| | || ||| ||||||  || |||||  |||||||||||
Sbjct: 4239 accgacggcggcgcggcgttggcgagcaggtactcgacgccgttcagcgtctggtaccgc 4298

                             
Query: 473  agattgctgctgacccc 489
            || ||||||||||||||
Sbjct: 4299 aggttgctgctgacccc 4315

>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0425G02
          Length = 155432

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 114/137 (83%)
 Strand = Plus / Plus

                                                                          
Query: 353    aaggacatcccaccaagcacgttgttgatgcacctgagagcaatgacggacaccttgaag 412
              |||||||| ||||| ||||||||||| ||||||| |||||||| ||||||||||||||| 
Sbjct: 127881 aaggacatgccacccagcacgttgtttatgcaccggagagcaacgacggacaccttgaac 127940

                                                                          
Query: 413    accggagccggcatgacattgccaagaaggaactcgatcccattcaggctctggtaccgc 472
              ||||  | ||||  | | ||| | || ||| ||||||  || |||||  |||||||||||
Sbjct: 127941 accgacggcggcgcggcgttggcgagcaggtactcgacgccgttcagcgtctggtaccgc 128000

                               
Query: 473    agattgctgctgacccc 489
              || ||||||||||||||
Sbjct: 128001 aggttgctgctgacccc 128017

>dbj|AK121582.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037D14, full
            insert sequence
          Length = 1404

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 114/137 (83%)
 Strand = Plus / Minus

                                                                        
Query: 353  aaggacatcccaccaagcacgttgttgatgcacctgagagcaatgacggacaccttgaag 412
            |||||||| ||||| ||||||||||| ||||||| |||||||| ||||||||||||||| 
Sbjct: 1034 aaggacatgccacccagcacgttgtttatgcaccggagagcaacgacggacaccttgaac 975

                                                                        
Query: 413  accggagccggcatgacattgccaagaaggaactcgatcccattcaggctctggtaccgc 472
            ||||  | ||||  | | ||| | || ||| ||||||  || |||||  |||||||||||
Sbjct: 974  accgacggcggcgcggcgttggcgagcaggtactcgacgccgttcagcgtctggtaccgc 915

                             
Query: 473  agattgctgctgacccc 489
            || ||||||||||||||
Sbjct: 914  aggttgctgctgacccc 898

>emb|AL669839.13| Mouse DNA sequence from clone RP23-171P1 on chromosome 11 Contains part
             of the Slit 3 gene for slit homolog 3 (Drosophila),
             complete sequence
          Length = 169097

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 284   ttggcctctggaacagaagct 304
             |||||||||||||||||||||
Sbjct: 80102 ttggcctctggaacagaagct 80122

>gb|AF015722.3| Homo sapiens chromosome 21 clone cosmid clone Q30A10 map 21q22.2,
             complete sequence
          Length = 41176

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 266   tctgctatcaatctctccttggcct 290
             ||||||||||||||| |||||||||
Sbjct: 13316 tctgctatcaatctccccttggcct 13292

>dbj|BS000197.1| Pan troglodytes chromosome 22 clone:PTB-108M20, map 22, complete
              sequences
          Length = 192863

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 266    tctgctatcaatctctccttggcct 290
              ||||||||||||||| |||||||||
Sbjct: 154869 tctgctatcaatctccccttggcct 154845

>emb|AJ229041.1|HS229041 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22;
              segment 1/3
          Length = 323000

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 266    tctgctatcaatctctccttggcct 290
              ||||||||||||||| |||||||||
Sbjct: 313371 tctgctatcaatctccccttggcct 313395

>emb|AL163268.2|HS21C068 Homo sapiens chromosome 21 segment HS21C068
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 266    tctgctatcaatctctccttggcct 290
              ||||||||||||||| |||||||||
Sbjct: 208656 tctgctatcaatctccccttggcct 208632

>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 302     gctgccggcttatctgatttctgt 325
               ||||||||||| ||||||||||||
Sbjct: 1401768 gctgccggcttttctgatttctgt 1401745

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 394     aatgacggacaccttgaaga 413
               ||||||||||||||||||||
Sbjct: 3669528 aatgacggacaccttgaaga 3669547

>gb|AC124358.4| Mus musculus BAC clone RP24-491B24 from chromosome 3, complete sequence
          Length = 161119

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    aaaccaaccgaataaaatgt 83
             ||||||||||||||||||||
Sbjct: 18376 aaaccaaccgaataaaatgt 18395

>gb|AC122049.2| Mus musculus BAC clone RP24-456N19 from 16, complete sequence
          Length = 167576

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    gcctcactcattattaccaa 108
             ||||||||||||||||||||
Sbjct: 41988 gcctcactcattattaccaa 42007

>emb|AL160273.9| Human DNA sequence from clone RP11-366I5 on chromosome 9, complete
             sequence
          Length = 159934

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    acaccaagatcaccacaaac 67
             ||||||||||||||||||||
Sbjct: 27476 acaccaagatcaccacaaac 27457

>gb|AC162374.4| Mus musculus BAC clone RP24-370I14 from chromosome 16, complete sequence
          Length = 157491

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     gcctcactcattattaccaa 108
              ||||||||||||||||||||
Sbjct: 101416 gcctcactcattattaccaa 101397

>gb|AC157941.4| Mus musculus BAC clone RP24-253I2 from chromosome 3, complete sequence
          Length = 204323

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    aaaccaaccgaataaaatgt 83
             ||||||||||||||||||||
Sbjct: 47723 aaaccaaccgaataaaatgt 47704

>gb|AE009498.1| Brucella melitensis 16M chromosome I, section 55 of 195 of the
            complete sequence
          Length = 9004

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 302  gctgccggcttatctgatttctgt 325
            ||||||||||| ||||||||||||
Sbjct: 6867 gctgccggcttttctgatttctgt 6890

>gb|AC010890.9| Homo sapiens BAC clone RP11-449L24 from 2, complete sequence
          Length = 62764

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   taacattagcagcaatgaca 259
             ||||||||||||||||||||
Sbjct: 42851 taacattagcagcaatgaca 42870

>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 302     gctgccggcttatctgatttctgt 325
               ||||||||||| ||||||||||||
Sbjct: 1419820 gctgccggcttttctgatttctgt 1419797

>gb|AC145958.3| Gallus gallus BAC clone CH261-16J12 from chromosome unknown, complete
             sequence
          Length = 207441

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   acaaatttcttggctgtgtc 149
             ||||||||||||||||||||
Sbjct: 43426 acaaatttcttggctgtgtc 43407

>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 302     gctgccggcttatctgatttctgt 325
               ||||||||||| ||||||||||||
Sbjct: 1416970 gctgccggcttttctgatttctgt 1416947


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,939,364
Number of Sequences: 3902068
Number of extensions: 3939364
Number of successful extensions: 67678
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67575
Number of HSP's gapped (non-prelim): 103
length of query: 494
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 472
effective length of database: 17,147,199,772
effective search space: 8093478292384
effective search space used: 8093478292384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)