ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast72g09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475849.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1566 Score = 167 bits (84), Expect = 3e-38 Identities = 122/132 (92%), Gaps = 2/132 (1%) Strand = Plus / Minus Query: 249 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 308 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 1562 agcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagccttcacg 1503 Query: 309 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 367 |||||||| || || |||||||||||||||||||| |||||||| ||| || |||||||| Sbjct: 1502 ctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctg-tcatggtagtc 1444 Query: 368 gatcttggactg 379 |||||||||||| Sbjct: 1443 gatcttggactg 1432
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 167 bits (84), Expect = 3e-38 Identities = 122/132 (92%), Gaps = 2/132 (1%) Strand = Plus / Minus Query: 249 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 308 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 3289 agcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagccttcacg 3230 Query: 309 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 367 |||||||| || || |||||||||||||||||||| |||||||| ||| || |||||||| Sbjct: 3229 ctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctg-tcatggtagtc 3171 Query: 368 gatcttggactg 379 |||||||||||| Sbjct: 3170 gatcttggactg 3159
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 167 bits (84), Expect = 3e-38 Identities = 122/132 (92%), Gaps = 2/132 (1%) Strand = Plus / Minus Query: 249 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 308 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 78474 agcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagccttcacg 78415 Query: 309 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 367 |||||||| || || |||||||||||||||||||| |||||||| ||| || |||||||| Sbjct: 78414 ctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctg-tcatggtagtc 78356 Query: 368 gatcttggactg 379 |||||||||||| Sbjct: 78355 gatcttggactg 78344
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 167 bits (84), Expect = 3e-38 Identities = 122/132 (92%), Gaps = 2/132 (1%) Strand = Plus / Minus Query: 249 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 308 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 102977 agcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagccttcacg 102918 Query: 309 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 367 |||||||| || || |||||||||||||||||||| |||||||| ||| || |||||||| Sbjct: 102917 ctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctg-tcatggtagtc 102859 Query: 368 gatcttggactg 379 |||||||||||| Sbjct: 102858 gatcttggactg 102847
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 167 bits (84), Expect = 3e-38 Identities = 122/132 (92%), Gaps = 2/132 (1%) Strand = Plus / Minus Query: 249 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 308 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 27071893 agcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagccttcacg 27071834 Query: 309 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 367 |||||||| || || |||||||||||||||||||| |||||||| ||| || |||||||| Sbjct: 27071833 ctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctg-tcatggtagtc 27071775 Query: 368 gatcttggactg 379 |||||||||||| Sbjct: 27071774 gatcttggactg 27071763 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 cagcagcagcaggaggacgagggc 240 ||||||||||||||||| |||||| Sbjct: 4882747 cagcagcagcaggaggaggagggc 4882724
>dbj|AK109478.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F04, full insert sequence Length = 1876 Score = 167 bits (84), Expect = 3e-38 Identities = 122/132 (92%), Gaps = 2/132 (1%) Strand = Plus / Minus Query: 249 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 308 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 1612 agcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagccttcacg 1553 Query: 309 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 367 |||||||| || || |||||||||||||||||||| |||||||| ||| || |||||||| Sbjct: 1552 ctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctg-tcatggtagtc 1494 Query: 368 gatcttggactg 379 |||||||||||| Sbjct: 1493 gatcttggactg 1482
>dbj|AK101669.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058D04, full insert sequence Length = 1938 Score = 167 bits (84), Expect = 3e-38 Identities = 122/132 (92%), Gaps = 2/132 (1%) Strand = Plus / Minus Query: 249 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 308 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 1661 agcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagccttcacg 1602 Query: 309 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 367 |||||||| || || |||||||||||||||||||| |||||||| ||| || |||||||| Sbjct: 1601 ctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctg-tcatggtagtc 1543 Query: 368 gatcttggactg 379 |||||||||||| Sbjct: 1542 gatcttggactg 1531
>gb|AY112514.1| Zea mays CL891_1 mRNA sequence Length = 1846 Score = 131 bits (66), Expect = 2e-27 Identities = 122/138 (88%), Gaps = 2/138 (1%) Strand = Plus / Minus Query: 243 gctcaaagcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggcc 302 ||||| ||||| ||||||||||||||||| || || |||||||||||||| ||||||||| Sbjct: 1607 gctcagagcttgcccttgagcctcttcttcagcacatccatgacggcgccaaagtcggcc 1548 Query: 303 ttcacgctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtg 361 |||||||| || || ||||||| |||||||| ||||||||||||||||| ||| || || Sbjct: 1547 ttcacgctcacaggcgggttggagtacttgcaagccatgtcctcgatcttgctg-tcatg 1489 Query: 362 gtagtcgatcttggactg 379 |||||||||||| ||||| Sbjct: 1488 gtagtcgatcttcgactg 1471
>gb|BT016678.1| Zea mays clone Contig511 mRNA sequence Length = 1283 Score = 119 bits (60), Expect = 7e-24 Identities = 116/132 (87%), Gaps = 2/132 (1%) Strand = Plus / Minus Query: 249 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 308 ||||| ||||||||||||||||| || || |||||||||||||| ||||| ||||||||| Sbjct: 1023 agcttgcccttgagcctcttcttcagcacatccatgacggcgccaaagtcagccttcacg 964 Query: 309 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 367 || || || ||||||| |||||||| ||||||||||||||||| ||| || |||||||| Sbjct: 963 ctcacaggcgggttggagtacttgcaagccatgtcctcgatcttgctg-tcatggtagtc 905 Query: 368 gatcttggactg 379 |||||| ||||| Sbjct: 904 gatcttcgactg 893
>ref|NM_185677.1| Oryza sativa (japonica cultivar-group), Ozsa8028 predicted mRNA Length = 4848 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 214 ggtcagcagcagcaggaggacgaggg 239 |||||||||||||||||||| ||||| Sbjct: 118 ggtcagcagcagcaggaggaggaggg 143
>gb|AC113548.22| Mus musculus chromosome 9, clone RP23-268F15, complete sequence Length = 195273 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 210 gaggggtcagcagcagcaggag 231 |||||||||||||||||||||| Sbjct: 128709 gaggggtcagcagcagcaggag 128688
>emb|CR456637.3| Platypus DNA sequence from clone XX-104A18, complete sequence Length = 110477 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 cagcagcagcaggaggacgagg 238 |||||||||||||||||||||| Sbjct: 25235 cagcagcagcaggaggacgagg 25256
>emb|CR388525.1| Gallus gallus finished cDNA, clone ChEST1020i2 Length = 787 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 cagcagcagcaggaggacgagg 238 |||||||||||||||||||||| Sbjct: 186 cagcagcagcaggaggacgagg 207
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 cagcagcagcaggaggacgagg 238 |||||||||||||||||||||| Sbjct: 18376021 cagcagcagcaggaggacgagg 18376042
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 214 ggtcagcagcagcaggaggacgaggg 239 |||||||||||||||||||| ||||| Sbjct: 3762107 ggtcagcagcagcaggaggaggaggg 3762132
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 214 ggtcagcagcagcaggaggacgaggg 239 |||||||||||||||||||| ||||| Sbjct: 156335 ggtcagcagcagcaggaggaggaggg 156360
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 214 ggtcagcagcagcaggaggacgaggg 239 |||||||||||||||||||| ||||| Sbjct: 20061 ggtcagcagcagcaggaggaggaggg 20086
>dbj|AK059573.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A04, full insert sequence Length = 1843 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 cagcagcagcaggaggacgagg 238 |||||||||||||||||||||| Sbjct: 212 cagcagcagcaggaggacgagg 233
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 cagcagcagcaggaggacgagg 238 |||||||||||||||||||||| Sbjct: 18302247 cagcagcagcaggaggacgagg 18302268
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 cagcagcagcaggaggacgagg 238 |||||||||||||||||||||| Sbjct: 27920 cagcagcagcaggaggacgagg 27941
>gb|AC010919.11| Drosophila melanogaster clone BACR32K23, complete sequence Length = 198967 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gcagcaggaggacgagggcat 242 ||||||||||||||||||||| Sbjct: 75961 gcagcaggaggacgagggcat 75941
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 cgccgaagtcggccttcacgc 309 ||||||||||||||||||||| Sbjct: 3194661 cgccgaagtcggccttcacgc 3194681 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cagcagcagcaggaggacga 236 |||||||||||||||||||| Sbjct: 32606332 cagcagcagcaggaggacga 32606351
>ref|XM_546389.2| PREDICTED: Canis familiaris similar to junctional adhesion molecule 3 precursor (LOC489271), mRNA Length = 2389 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 agcagcagcaggaggacgagg 238 ||||||||||||||||||||| Sbjct: 1103 agcagcagcaggaggacgagg 1083
>ref|NM_206750.1| Drosophila melanogaster CG15603-PA (CG15603) mRNA, complete cds Length = 1020 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 gcagcaggaggacgagggcat 242 ||||||||||||||||||||| Sbjct: 215 gcagcaggaggacgagggcat 235
>gb|AC013423.6|AC013423 Drosophila melanogaster, chromosome 2R, region 47D-47E, BAC clone BACR09B12, complete sequence Length = 170341 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 aatcgcaaaagccaatcggag 212 ||||||||||||||||||||| Sbjct: 123561 aatcgcaaaagccaatcggag 123541
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 cgccgaagtcggccttcacgc 309 ||||||||||||||||||||| Sbjct: 3194772 cgccgaagtcggccttcacgc 3194792 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cagcagcagcaggaggacga 236 |||||||||||||||||||| Sbjct: 32696842 cagcagcagcaggaggacga 32696861
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 cgccgaagtcggccttcacgc 309 ||||||||||||||||||||| Sbjct: 19534 cgccgaagtcggccttcacgc 19554
>gb|AE003826.4| Drosophila melanogaster chromosome 2R, section 24 of 73 of the complete sequence Length = 310108 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 aatcgcaaaagccaatcggag 212 ||||||||||||||||||||| Sbjct: 97855 aatcgcaaaagccaatcggag 97835
>gb|AE003500.4| Drosophila melanogaster chromosome X, section 52 of 74 of the complete sequence Length = 303344 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gcagcaggaggacgagggcat 242 ||||||||||||||||||||| Sbjct: 243875 gcagcaggaggacgagggcat 243855
>gb|AC006066.1|AC006066 Drosophila melanogaster, chromosome 2R, region 47D6-47E6, P1 clones DS00724 and DS00284, complete sequence Length = 110338 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 aatcgcaaaagccaatcggag 212 ||||||||||||||||||||| Sbjct: 66087 aatcgcaaaagccaatcggag 66067
>ref|XM_469941.1| Oryza sativa (japonica cultivar-group), mRNA Length = 591 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cagcagcagcaggaggacga 236 |||||||||||||||||||| Sbjct: 277 cagcagcagcaggaggacga 296
>ref|XM_468423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1077 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cagcagcagcaggaggacga 236 |||||||||||||||||||| Sbjct: 520 cagcagcagcaggaggacga 539
>ref|XM_465863.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1578 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggtcagcagcagcaggagga 233 |||||||||||||||||||| Sbjct: 60 ggtcagcagcagcaggagga 41
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 cagcagcagcaggaggacga 236 |||||||||||||||||||| Sbjct: 137575 cagcagcagcaggaggacga 137556
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 tcagcagcagcaggaggacg 235 |||||||||||||||||||| Sbjct: 20905 tcagcagcagcaggaggacg 20886
>emb|CR682616.2|CNS0FPNO Tetraodon nigroviridis full-length cDNA Length = 1099 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 tcagcagcagcaggaggacgaggg 239 |||||||||||||||||| ||||| Sbjct: 726 tcagcagcagcaggaggaggaggg 749
>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004G10 Length = 150379 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 tcagcagcagcaggaggacg 235 |||||||||||||||||||| Sbjct: 53443 tcagcagcagcaggaggacg 53424
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cagcagcagcaggaggacga 236 |||||||||||||||||||| Sbjct: 35152270 cagcagcagcaggaggacga 35152289 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggtcagcagcagcaggagga 233 |||||||||||||||||||| Sbjct: 17962036 ggtcagcagcagcaggagga 17962017
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 tcagcagcagcaggaggacg 235 |||||||||||||||||||| Sbjct: 8056792 tcagcagcagcaggaggacg 8056773
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 cttgaggacgtccatgacggcgcc 292 ||||||||||||||||||| |||| Sbjct: 6806910 cttgaggacgtccatgacgacgcc 6806887 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 agcagcaggaggacgagggc 240 |||||||||||||||||||| Sbjct: 3858848 agcagcaggaggacgagggc 3858829
>ref|XM_341579.2| PREDICTED: Rattus norvegicus Niemann-Pick disease, type C1 (predicted) (Npc1_predicted), mRNA Length = 3850 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 cagcagcagcaggaggacgagggc 240 |||||||||||||||| ||||||| Sbjct: 55 cagcagcagcaggaggccgagggc 32
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cagcagcagcaggaggacga 236 |||||||||||||||||||| Sbjct: 47626 cagcagcagcaggaggacga 47645
>dbj|AP004022.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_B06 Length = 99637 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggtcagcagcagcaggagga 233 |||||||||||||||||||| Sbjct: 96669 ggtcagcagcagcaggagga 96650
>dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F04 Length = 139563 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggtcagcagcagcaggagga 233 |||||||||||||||||||| Sbjct: 23630 ggtcagcagcagcaggagga 23611
>dbj|AK106020.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-C01, full insert sequence Length = 1450 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 cagcagcagcaggaggacgagggc 240 ||||||||||||||||| |||||| Sbjct: 452 cagcagcagcaggaggaggagggc 475
>dbj|AK071095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079N14, full insert sequence Length = 1460 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 cagcagcagcaggaggacgagggc 240 ||||||||||||||||| |||||| Sbjct: 462 cagcagcagcaggaggaggagggc 485
>gb|AF118825.1|AF118825 Ilyanassa obsoleta myosin II heavy chain mRNA, partial cds Length = 1620 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccatgtcctcgatcttct 354 |||||||||||||||||||| Sbjct: 432 ggccatgtcctcgatcttct 413
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 cagcagcagcaggaggacgagggc 240 ||||||||||||||||| |||||| Sbjct: 155155 cagcagcagcaggaggaggagggc 155132 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,402,536 Number of Sequences: 3902068 Number of extensions: 3402536 Number of successful extensions: 68405 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67953 Number of HSP's gapped (non-prelim): 442 length of query: 383 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 361 effective length of database: 17,147,199,772 effective search space: 6190139117692 effective search space used: 6190139117692 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
