| Clone Name | rbast72g04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SYSC_SCHPO (O14018) Seryl-tRNA synthetase, cytoplasmic (EC 6.1.1... | 30 | 1.1 | 2 | I12R2_MOUSE (P97378) Interleukin-12 receptor beta-2 chain precur... | 28 | 4.0 | 3 | FA18B_PONPY (Q5R9I4) Protein FAM18B | 28 | 4.0 | 4 | FA18B_HUMAN (Q9NYZ1) Protein FAM18B | 28 | 4.0 | 5 | Y750_METJA (Q58160) Hypothetical protein MJ0750 | 28 | 6.8 | 6 | ASSY_SULTO (Q970V0) Argininosuccinate synthase (EC 6.3.4.5) (Cit... | 27 | 8.9 |
|---|
>SYSC_SCHPO (O14018) Seryl-tRNA synthetase, cytoplasmic (EC 6.1.1.11)| (Serine--tRNA ligase) (SerRS) Length = 450 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +2 Query: 101 QRQNVEIVCTVIQI*--KKKKTGWLISAACLYSRSACC*LSDHHVPEG 238 Q +N+EI C V ++ +KK L S C R+ CC L ++ P+G Sbjct: 369 QSRNLEIRCGVKKMGDREKKYVHCLNSTLCATERALCCILENYQTPDG 416
>I12R2_MOUSE (P97378) Interleukin-12 receptor beta-2 chain precursor (IL-12| receptor beta-2) (IL-12R-beta2) Length = 874 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -3 Query: 207 QQADREYRQAAEINHPVFFFFYICITVQTISTFCLCYF 94 Q +RE+ + N F ICI + T+ TF + YF Sbjct: 624 QGNEREFCPQGKANWKAFVISSICIAIITVGTFSIRYF 661
>FA18B_PONPY (Q5R9I4) Protein FAM18B| Length = 205 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -3 Query: 177 AEINHPVFFFFYICITVQTISTFCLCYFLIIRLRRPVCSRLKKLLCQLIIIGNPT-RLFV 1 A+I HPV FF++ V I + LC L + + + L C + N T RL V Sbjct: 29 AKIRHPVASFFHLFFRVSAIIVYLLCELLSSSFITCMVTIILLLSCDFWAVKNVTGRLMV 88
>FA18B_HUMAN (Q9NYZ1) Protein FAM18B| Length = 205 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -3 Query: 177 AEINHPVFFFFYICITVQTISTFCLCYFLIIRLRRPVCSRLKKLLCQLIIIGNPT-RLFV 1 A+I HPV FF++ V I + LC L + + + L C + N T RL V Sbjct: 29 AKIRHPVASFFHLFFRVSAIIVYLLCELLSSSFITCMVTIILLLSCDFWAVKNVTGRLMV 88
>Y750_METJA (Q58160) Hypothetical protein MJ0750| Length = 238 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/50 (28%), Positives = 31/50 (62%) Frame = -3 Query: 174 EINHPVFFFFYICITVQTISTFCLCYFLIIRLRRPVCSRLKKLLCQLIII 25 +I+ +FF +++ +T +FCLC+F II + + + +L+ +L++I Sbjct: 9 KISQTLFFIYFVFLT-----SFCLCFFGIIE-KFILKGSVGQLIAKLVVI 52
>ASSY_SULTO (Q970V0) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 390 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 127 YGYTNIEEEKNRVVDFSSLSVFPVRLLLI 213 YG+ +E +NRVV F S V+ V L+ Sbjct: 244 YGFGRVEHLENRVVGFKSREVYEVPAALV 272 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,068,831 Number of Sequences: 219361 Number of extensions: 992555 Number of successful extensions: 1934 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1901 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1934 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)