>emb|X78877.1|HVACXPII3 Hordeum vulgare L. (Alexis) mRNA for serine carboxypeptidase II-3
          Length = 1979

 Score =  561 bits (283), Expect = e-157
 Identities = 289/291 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    attgcaacatgccattttggcatagatgttcatacttaacaaattacaccatacactttc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1876 attgcaacatgccattttggcatagatgttcatacttaacaaattacaccatacactttc 1817

                                                                        
Query: 61   ctatctatatgaaagcatttgctgacctgcagttacatggtctgcggagtgcatgggttg 120
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1816 ctatctatatgaaagcatttgctgacctgcagttacatggcctgcggagtgcatgggttg 1757

                                                                        
Query: 121  atgatgggtttctgtatctaactttacttgattttgcttgtttcttgtactgaatcaaat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1756 atgatgggtttctgtatctaactttacttgattttgcttgtttcttgtactgaatcaaat 1697

                                                                        
Query: 181  gatacaacctgtgaaacctgctggtgtactatcttttagtgtaaaaccttcttttctttt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1696 gatacaacctgtgaaacctgctggtgtactatcttttagtgtaaaaccttcttttctttt 1637

                                                               
Query: 241  gctaatcctgttcgcattctttgcagtcagggagcgctttgcctgcaagga 291
            |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1636 gctaatcctgttcgcattctttgcagtcagggagcgctttgcctgcgagga 1586

>gb|AC115809.8| Mus musculus chromosome 8, clone RP23-416L3, complete sequence
          Length = 193884

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 213    cttttagtgtaaaaccttctttt 235
              |||||||||||||||||||||||
Sbjct: 102292 cttttagtgtaaaaccttctttt 102270

>gb|AF091216.1|AF091216 Mus musculus Wrn protein (Wrn) gene, complete cds
          Length = 97348

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 213  cttttagtgtaaaaccttctttt 235
            |||||||||||||||||||||||
Sbjct: 3759 cttttagtgtaaaaccttctttt 3737

>gb|AC146525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0060D22 map near S6115, complete sequence
          Length = 139929

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 157   cttgtttcttgtactgaatca 177
             |||||||||||||||||||||
Sbjct: 27390 cttgtttcttgtactgaatca 27410

>emb|AL158827.27| Human DNA sequence from clone RP11-330M2 on chromosome 9 Contains a
             pseudogene similar to part of a zinc finger protein, two
             novel pseudogenes, a novel gene similar to DKFZP434I1117,
             a novel pseudogene (FLJ23476), two novel gene, a novel
             gene similar to MGC12954 and four CpG islands, complete
             sequence
          Length = 186108

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 216   ttagtgtaaaaccttcttttc 236
             |||||||||||||||||||||
Sbjct: 20854 ttagtgtaaaaccttcttttc 20834

>emb|AL512496.1|SPAC589 S.pombe chromosome I cosmid c589
          Length = 18342

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 220  tgtaaaaccttcttttctttt 240
            |||||||||||||||||||||
Sbjct: 3586 tgtaaaaccttcttttctttt 3606

>ref|NM_001019474.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC589.02c),
            partial mRNA
          Length = 3672

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 220  tgtaaaaccttcttttctttt 240
            |||||||||||||||||||||
Sbjct: 1053 tgtaaaaccttcttttctttt 1033

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 157      cttgtttcttgtactgaatca 177
                |||||||||||||||||||||
Sbjct: 12348107 cttgtttcttgtactgaatca 12348087

>gb|AC021200.7| Homo sapiens BAC clone RP11-62B4 from 4, complete sequence
          Length = 154690

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 222   taaaaccttcttttcttttgctaat 246
             |||||| ||||||||||||||||||
Sbjct: 31833 taaaactttcttttcttttgctaat 31857

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 157      cttgtttcttgtactgaatca 177
                |||||||||||||||||||||
Sbjct: 12427414 cttgtttcttgtactgaatca 12427394

>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0013J21, complete sequence
          Length = 155290

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   cttgattttgcttgtttctt 166
             ||||||||||||||||||||
Sbjct: 69068 cttgattttgcttgtttctt 69049

>gb|AY490796.1| Helianthus annuus clone Ha-NTIR11-3prime CC-NBS-LRR-like protein
           mRNA, partial cds
          Length = 2791

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 69  atgaaagcatttgctgacctgcag 92
           ||||| ||||||||||||||||||
Sbjct: 862 atgaaggcatttgctgacctgcag 885

>gb|AY567487.2| Human Coronavirus NL63, complete genome
          Length = 27553

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 140   aactttacttgattttgcttgttt 163
             |||||| |||||||||||||||||
Sbjct: 20476 aacttttcttgattttgcttgttt 20499

>gb|AC146867.3| Xenopus tropicalis clone CH216-119B15, complete sequence
          Length = 157383

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 67    atatgaaagcatttgctgacctgcagttacat 98
             ||||||||||||||||||| || || ||||||
Sbjct: 83643 atatgaaagcatttgctgagctacaattacat 83674

>gb|AY490793.1| Helianthus annuus clone Ha-NTIR11g CC-NBS-LRR gene, complete cds
          Length = 7362

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 69   atgaaagcatttgctgacctgcag 92
            ||||| ||||||||||||||||||
Sbjct: 3844 atgaaggcatttgctgacctgcag 3867

>gb|AC123547.15| Medicago truncatula clone mth2-26n6, complete sequence
          Length = 111995

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   gtaaaaccttcttttctttt 240
             ||||||||||||||||||||
Sbjct: 74096 gtaaaaccttcttttctttt 74115

>emb|AL500527.19| Human DNA sequence from clone RP11-302K17 on chromosome 10 Contains the
              gene for  Hermansky-Pudlak syndrome-6 protein (HPS6), two
              pseudogenes for  transcription elongation factor B (SIII),
              polypeptide 1, the LDB1 gene for LIM domain binding 1, a
              novel gene (KIAA0595), the NOLC1 gene for nucleolar and
              coiled-body phosphoprotein 1 and five CpG islands, complete
              sequence
          Length = 158434

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      tgcaacatgccattttggca 22
              ||||||||||||||||||||
Sbjct: 109835 tgcaacatgccattttggca 109854

>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     ggagcgctttgcctgcaagg 290
               ||||||||||||||||||||
Sbjct: 1326070 ggagcgctttgcctgcaagg 1326051

>emb|AL162720.8| Human DNA sequence from clone RP1-132N8 on chromosome 6 Contains a
             pseudogene of the likely ortholog of mouse suppressors of
             cytokine signalling 5 (SOCS5, CIS6, CISH6, KIAA0761),
             complete sequence
          Length = 57355

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   tgattttgcttgtttcttgt 168
             ||||||||||||||||||||
Sbjct: 28712 tgattttgcttgtttcttgt 28731

>emb|AL035251.11|HS705O1 Human DNA sequence from clone RP4-705O1 on chromosome 20q11.2 Contains
             a novel gene, complete sequence
          Length = 161888

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 137   tctaactttacttgattttgcttg 160
             ||||||||||||||||| ||||||
Sbjct: 23159 tctaactttacttgattctgcttg 23182

>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    ttacttgattttgcttgttt 163
              ||||||||||||||||||||
Sbjct: 487174 ttacttgattttgcttgttt 487155

>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 147     cttgattttgcttgtttctt 166
               ||||||||||||||||||||
Sbjct: 2090928 cttgattttgcttgtttctt 2090909

>emb|BX682549.8| Zebrafish DNA sequence from clone CH211-193L17 in linkage group 20,
            complete sequence
          Length = 151560

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 169  actgaatcaaatgatacaacctgt 192
            |||||| |||||||||||||||||
Sbjct: 7377 actgaaccaaatgatacaacctgt 7400

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 147     cttgattttgcttgtttctt 166
               ||||||||||||||||||||
Sbjct: 2090928 cttgattttgcttgtttctt 2090909

>gb|AY697420.1| Human coronavirus NL63 strain Amsterdam 1 spike protein (S) mRNA,
           partial cds
          Length = 287

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 140 aactttacttgattttgcttgttt 163
           |||||| |||||||||||||||||
Sbjct: 73  aacttttcttgattttgcttgttt 96

>gb|AY902242.1| Human coronavirus NL63 isolate SWE 10614/2004 spike protein gene,
           partial cds
          Length = 586

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 140 aactttacttgattttgcttgttt 163
           |||||| |||||||||||||||||
Sbjct: 43  aacttttcttgattttgcttgttt 66

>gb|AC117516.5| Homo sapiens 3 BAC RP11-845C18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 172997

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   aaccttcttttcttttgcta 244
             ||||||||||||||||||||
Sbjct: 54614 aaccttcttttcttttgcta 54633

>gb|AC073409.8| Homo sapiens BAC clone RP11-17O9 from 2, complete sequence
          Length = 180903

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     attttggcatagatgttcat 33
              ||||||||||||||||||||
Sbjct: 100998 attttggcatagatgttcat 100979

>emb|AL672110.10| Mouse DNA sequence from clone RP23-338D24 on chromosome X, complete
             sequence
          Length = 167407

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    cattttggcatagatgttca 32
             ||||||||||||||||||||
Sbjct: 13712 cattttggcatagatgttca 13693

>emb|BX530723.8| Zebrafish DNA sequence from clone DKEYP-119B4 in linkage group 20,
             complete sequence
          Length = 119735

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 169   actgaatcaaatgatacaacctgt 192
             |||||| |||||||||||||||||
Sbjct: 93249 actgaaccaaatgatacaacctgt 93272

>gb|AY108013.1| Zea mays PCO089815 mRNA sequence
          Length = 453

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 260 tttgcagtcagggagcgctttgcctgcaagga 291
           ||||||| |||| |||| ||||||||||||||
Sbjct: 312 tttgcagccaggaagcgttttgcctgcaagga 281

>gb|AY758301.1| Human coronavirus NL63 strain BE03-64880 spike protein gene,
           partial cds
          Length = 614

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 140 aactttacttgattttgcttgttt 163
           |||||| |||||||||||||||||
Sbjct: 40  aacttttcttgattttgcttgttt 63

>gb|AY758298.1| Human coronavirus NL63 strain BE03-21596 spike protein gene,
           partial cds
          Length = 614

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 140 aactttacttgattttgcttgttt 163
           |||||| |||||||||||||||||
Sbjct: 40  aacttttcttgattttgcttgttt 63

>gb|AY758297.1| Human coronavirus NL63 strain BE03-1153 spike protein gene, partial
           cds
          Length = 614

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 140 aactttacttgattttgcttgttt 163
           |||||| |||||||||||||||||
Sbjct: 40  aacttttcttgattttgcttgttt 63

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 147     cttgattttgcttgtttctt 166
               ||||||||||||||||||||
Sbjct: 2090879 cttgattttgcttgtttctt 2090860

>emb|AL671215.4| Mouse DNA sequence from clone RP23-277C18 on chromosome X, complete
              sequence
          Length = 182633

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    gtcagggagcgctttgcctg 285
              ||||||||||||||||||||
Sbjct: 175316 gtcagggagcgctttgcctg 175335

>emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chromosome X, complete
             sequence
          Length = 160615

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 222   taaaaccttcttttcttttgctaa 245
             ||||| ||||||||||||||||||
Sbjct: 74487 taaaaacttcttttcttttgctaa 74510


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,833,732
Number of Sequences: 3902068
Number of extensions: 3833732
Number of successful extensions: 99584
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99335
Number of HSP's gapped (non-prelim): 249
length of query: 291
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 269
effective length of database: 17,147,199,772
effective search space: 4612596738668
effective search space used: 4612596738668
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)