>SCYBG_HUMAN (Q9H2A7) Small inducible cytokine B16 precursor (Transmembrane|
           chemokine CXCL16) (SR-PSOX) (Scavenger receptor for
           phosphatidylserine and oxidized low density lipoprotein)
          Length = 254

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 60  FTKFELCNFVSTN*RKQPCMREIYICILL*EYLHLYSSRASHRK 191
           +T+F+L ++      K P ++E+  C+ L E  H YS   +H+K
Sbjct: 71  YTRFQLLSWSVCGGNKDPWVQELMSCLDLKECGHAYSGIVAHQK 114

>LAMA2_HUMAN (P24043) Laminin alpha-2 chain precursor (Laminin M chain) (Merosin|
            heavy chain)
          Length = 3110

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
 Frame = -2

Query: 279  ARQHVAYPSAPILGMMEL*KLDTAHKQVPSFGDS---HVKNTDVDIPTIKYRCRFPACMA 109
            AR  V + +AP++G +   +++   K+   +GD    H   T  D   I Y   +    A
Sbjct: 1284 ARIIVRHMAAPLIGQLTRHEIEMTEKEWKYYGDDPRVHRTVTREDFLDILYDIHYILIKA 1343

Query: 108  VSFNWLRQNYIAQI 67
               N++RQ+ I++I
Sbjct: 1344 TYGNFMRQSRISEI 1357

>RPOC_MYCPN (P75271) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1290

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 110 AMHAGNLHLYFIVGISTSVFFTCESPKDGTCLCAV 214
           A  AG +HL+ IVGIST  F        GT +  V
Sbjct: 606 AYEAGKVHLHAIVGISTKAFPNKHFEAQGTLITTV 640

>PHS_PROMP (Q7V2I5) Putative pterin-4-alpha-carbinolamine dehydratase (EC|
           4.2.1.96) (PHS) (4-alpha-hydroxy-tetrahydropterin
           dehydratase) (Pterin carbinolamine dehydratase) (PCD)
          Length = 96

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -1

Query: 94  VETKLHSSNFVKVWSYVTSYAIMCE 20
           +E + + SNFV+ +S++T  A++CE
Sbjct: 28  IEREFNFSNFVEAFSFMTKIALICE 52

>RPOC_MYCPE (Q8EWX0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1288

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 104 ETAMHAGNLHLYFIVGISTSVFFTCESPKDGTCLCAV 214
           +T      +H++ I+GI TS F   + PKDG  +  V
Sbjct: 596 KTVYQMKKVHVHSIIGIPTSAFPKKQFPKDGILITTV 632

>HUT1_SCHPO (Q8WZJ9) UDP-galactose transporter homolog 1|
          Length = 322

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 136 VFYCRNIYICILHVRVTERRNLFVRRVKFSKFHHTENRCGWIGDVL 273
           +F+    +  I  V +T  R +F   +    FHHT +   W+G +L
Sbjct: 252 IFFTLEKFGSITLVTITLTRKIFTMLLSVFHFHHTVSSIQWLGILL 297

>PMT4_YEAST (P46971) Dolichyl-phosphate-mannose--protein mannosyltransferase 4|
           (EC 2.4.1.109)
          Length = 762

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 162 DVDIPTIKYRCRFPACMAVSFNWLRQ 85
           DVD P++KY    P C  V+ +WL Q
Sbjct: 18  DVDDPSLKYTKAAPKCEQVAEHWLLQ 43

>TRPM2_HUMAN (O94759) Transient receptor potential cation channel subfamily M|
            member 2 (EC 3.6.1.13) (Long transient receptor potential
            channel 2) (LTrpC2) (LTrpC-2) (Transient receptor
            potential channel 7) (TrpC7) (Estrogen-responsive
            element-associated
          Length = 1503

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 336  DVLPGAKSDAQEPGILGELARQHVAYPSAPI 244
            D  PG +   +EPG    +  +H+ YP+ P+
Sbjct: 1222 DAEPGGRKKTEEPGDSYHVNARHLLYPNCPV 1252

>ZN140_HUMAN (P52738) Zinc finger protein 140|
          Length = 457

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 108 QPCMREIYICILL*EYLHLYSSRASHRKTEPV 203
           QP  R++Y C++L  Y HL S   S  K + V
Sbjct: 24  QPAQRDLYRCVMLENYGHLVSLGLSISKPDVV 55

>MATK_ARATH (P56784) Maturase K (Intron maturase)|
          Length = 504

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 106 NSHACGKSTSVFYCRNIYICILHVRVTERRNLFVRRVKFSKFHH 237
           NSH C   +  F+ R       H+R T    LF R V + K HH
Sbjct: 212 NSHVCEYESIFFFLRKRSS---HLRSTSYEVLFERIVFYGKIHH 252

>LARGE_MOUSE (Q9Z1M7) Glycosyltransferase-like protein LARGE1 (EC 2.4.-.-)|
           (Acetylglucosaminyltransferase-like 1A)
          Length = 756

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 97  IKGNSHACGKSTSVFYCRNIYICILHVRVTERRNLFVRRVKFSKFH 234
           + GNS  CG+  +V  C  I++ I+       R++ V  VK   FH
Sbjct: 119 VAGNSSECGQQPAVEKCETIHVAIVCAGYNASRDV-VTLVKSVLFH 163

>LARGE_CHICK (Q66PG3) Glycosyltransferase-like protein LARGE1 (EC 2.4.-.-)|
           (Acetylglucosaminyltransferase-like 1A)
          Length = 756

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 97  IKGNSHACGKSTSVFYCRNIYICILHVRVTERRNLFVRRVKFSKFH 234
           + GNS  CG+  +V  C  I++ I+       R++ V  VK   FH
Sbjct: 119 VAGNSSECGQQPAVEKCETIHVAIVCAGYNASRDV-VTLVKSVLFH 163

>HMEN_DROME (P02836) Segmentation polarity homeobox protein engrailed|
          Length = 552

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 19/46 (41%), Positives = 21/46 (45%)
 Frame = +2

Query: 155 STSVFFTCESPKDGTCLCAVSSFQSSIIPRIGADG*ATC*RASSPR 292
           STS   T  S     C  A SS  SS   R+GA G      ASSP+
Sbjct: 340 STSSVATSSSSSSSGCSSAASSLNSSPSSRLGASGSGV--NASSPQ 383

>RWDD3_HUMAN (Q9Y3V2) RWD domain-containing protein 3|
          Length = 195

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = +1

Query: 64  QNLSYVILSQPIKGN-SHACGKSTSVFYCRNIYICILHVRVTERRNLFVRRV-KFSKFHH 237
           QNL + ILSQP  G+ S  C  STS      ++I +LH+     +  +V+ V K++    
Sbjct: 109 QNLRH-ILSQPETGSGSEKCTFSTSTTMDDGLWITLLHLDHMRAKTKYVKIVEKWASDLR 167

Query: 238 TENRCGWIGDVLTCELTKDPGLLGV 312
              R  ++G ++   L  D   L V
Sbjct: 168 LTGRLMFMGKIILILLQGDRNNLKV 192


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,211,592
Number of Sequences: 219361
Number of extensions: 889917
Number of successful extensions: 2024
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2024
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)