>UNG_SFVKA (P32941) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 218

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 162 IHHHHAWNMNGIHQVFPFNYYCSFLFG 82
           + ++  +N+N +  VFP+NYY S   G
Sbjct: 102 VRYYKGYNLNNVEGVFPWNYYLSCKIG 128

>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated|
            transcription factor 1) (DATF-1) (hDido1)
          Length = 2240

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -1

Query: 247  AAAGRSMANLDSLINDVFMQPPPKPAIP 164
            AA G SMA+    ++D  M PPPK ++P
Sbjct: 1505 AAVGVSMAHFS--VSDALMSPPPKSSLP 1530

>YPDB_SHIFL (P0AE41) Hypothetical response regulatory protein ypdB|
          Length = 244

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 204 TMFSCNLPPSRQFQIHHHHAWNMNGIHQVFPF 109
           T F   LPPS  F+ H     N+N I ++ P+
Sbjct: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW 212

>YPDB_ECOLI (P0AE39) Hypothetical response regulatory protein ypdB|
          Length = 244

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 204 TMFSCNLPPSRQFQIHHHHAWNMNGIHQVFPF 109
           T F   LPPS  F+ H     N+N I ++ P+
Sbjct: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW 212

>YPDB_ECO57 (P0AE40) Hypothetical response regulatory protein ypdB|
          Length = 244

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 204 TMFSCNLPPSRQFQIHHHHAWNMNGIHQVFPF 109
           T F   LPPS  F+ H     N+N I ++ P+
Sbjct: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW 212

>YPDB_ECOL6 (Q8FFE0) Hypothetical response regulatory protein ypdB|
          Length = 245

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 204 TMFSCNLPPSRQFQIHHHHAWNMNGIHQVFPF 109
           T F   LPPS  F+ H     N+N I ++ P+
Sbjct: 182 TEFFSKLPPSHFFRCHRSFCVNLNKIREIEPW 213


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,356,961
Number of Sequences: 219361
Number of extensions: 723426
Number of successful extensions: 2599
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2597
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)