ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast72b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473815.1| Oryza sativa (japonica cultivar-group), predic... 178 9e-42
2dbj|AK104482.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 9e-42
3dbj|AK059884.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 9e-42
4emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4,... 170 2e-39
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 170 2e-39
6gb|AY106916.1| Zea mays PCO102443 mRNA sequence 170 2e-39
7emb|BX293565.25| Zebrafish DNA sequence from clone DKEY-268M13 i... 42 1.3
8emb|BX005203.7| Zebrafish DNA sequence from clone DKEY-110C1 in ... 42 1.3
9ref|NM_122001.2| Arabidopsis thaliana structural molecule AT5G19... 40 5.3
10gb|AY261360.1| African swine fever virus isolate Kenya 1950, com... 40 5.3
11emb|CR388023.12| Zebrafish DNA sequence from clone DKEY-245J10 i... 40 5.3
12ref|XM_670452.1| Plasmodium berghei strain ANKA hypothetical pro... 40 5.3
13emb|CR388159.9| Zebrafish DNA sequence from clone DKEYP-15D11 in... 40 5.3
14gb|AY320039.1| Homo sapiens KIR_wt47 long haplotype gene, comple... 40 5.3
15emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 40 5.3
16emb|AL133414.4| Human DNA sequence from clone RP5-1060P11 on chr... 40 5.3
17gb|AC110747.3| Homo sapiens, clone RP11-103L16, complete sequence 40 5.3
18gb|AY060505.1| Arabidopsis thaliana AT5g19940/F28I16_90 mRNA, co... 40 5.3
19gb|AY052240.1| Arabidopsis thaliana AT5g19940/F28I16_90 mRNA, co... 40 5.3
20emb|BX831085.1|CNS09ZDE Arabidopsis thaliana Full-length cDNA Co... 40 5.3
21emb|BX830841.1|CNS09ZI7 Arabidopsis thaliana Full-length cDNA Co... 40 5.3
22gb|AY087141.1| Arabidopsis thaliana clone 32193 mRNA, complete s... 40 5.3
23gb|AF296836.1|F28I16 Arabidopsis thaliana BAC F28I16 40 5.3
24emb|AM259430.1| African swine fever virus partial B602L gene, is... 40 5.3
25emb|AM259429.1| African swine fever virus partial B602L gene, is... 40 5.3
26emb|AM259424.1| African swine fever virus partial B602L gene, is... 40 5.3
27emb|AM259423.1| African swine fever virus partial B602L gene, is... 40 5.3
28emb|AM259422.1| African swine fever virus partial B602L gene, is... 40 5.3
29emb|AM259421.1| African swine fever virus partial B602L gene, is... 40 5.3
30emb|AM259419.1| African swine fever virus partial B602L gene, is... 40 5.3
31emb|AM259415.1| African swine fever virus partial B602L gene, is... 40 5.3
32gb|BC097450.1| Rattus norvegicus echinoderm microtubule associat... 40 5.3
33ref|NM_001025741.1| Rattus norvegicus echinoderm microtubule ass... 40 5.3
34gb|AC147247.5| Mus musculus BAC clone RP23-468K14 from 8, comple... 40 5.3
35gb|AC139848.4| Mus musculus BAC clone RP23-358O17 from 8, comple... 40 5.3 
>ref|XM_473815.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 660

 Score =  178 bits (90), Expect = 9e-42
 Identities = 159/182 (87%)
 Strand = Plus / Minus

                                                                       
Query: 216 gaagacgaaaagcgagcctcgggatcctttcccgagcctgatcttctcgtcgacataggt 275
           ||||||||| ||||||||||  |||||||| || ||||||||||||||||||||||||||
Sbjct: 648 gaagacgaagagcgagcctcttgatccttttcccagcctgatcttctcgtcgacataggt 589

                                                                       
Query: 276 gatttccagcttgacttcgctctcgcccccgtatcggaaacccaaggagcctaccttcag 335
           ||| |||||||| |||||||||||||| || ||  | || |||| |||||||||||||| 
Sbjct: 588 gatctccagcttaacttcgctctcgccaccatactgaaaccccagggagcctaccttcac 529

                                                                       
Query: 336 ttccgggggctcaaatatgacctgaatccacttactgtctaatacattcagcttgccttt 395
           ||| || ||||| ||||||||||||||||||||||  || |  |||||||||||||||||
Sbjct: 528 ttctggtggctcgaatatgacctgaatccacttaccatccagcacattcagcttgccttt 469

             
Query: 396 ca 397
           ||
Sbjct: 468 ca 467
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>dbj|AK104482.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H04, full
           insert sequence
          Length = 946

 Score =  178 bits (90), Expect = 9e-42
 Identities = 159/182 (87%)
 Strand = Plus / Minus

                                                                       
Query: 216 gaagacgaaaagcgagcctcgggatcctttcccgagcctgatcttctcgtcgacataggt 275
           ||||||||| ||||||||||  |||||||| || ||||||||||||||||||||||||||
Sbjct: 686 gaagacgaagagcgagcctcttgatccttttcccagcctgatcttctcgtcgacataggt 627

                                                                       
Query: 276 gatttccagcttgacttcgctctcgcccccgtatcggaaacccaaggagcctaccttcag 335
           ||| |||||||| |||||||||||||| || ||  | || |||| |||||||||||||| 
Sbjct: 626 gatctccagcttaacttcgctctcgccaccatactgaaaccccagggagcctaccttcac 567

                                                                       
Query: 336 ttccgggggctcaaatatgacctgaatccacttactgtctaatacattcagcttgccttt 395
           ||| || ||||| ||||||||||||||||||||||  || |  |||||||||||||||||
Sbjct: 566 ttctggtggctcgaatatgacctgaatccacttaccatccagcacattcagcttgccttt 507

             
Query: 396 ca 397
           ||
Sbjct: 506 ca 505
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>dbj|AK059884.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-A09, full
           insert sequence
          Length = 973

 Score =  178 bits (90), Expect = 9e-42
 Identities = 159/182 (87%)
 Strand = Plus / Minus

                                                                       
Query: 216 gaagacgaaaagcgagcctcgggatcctttcccgagcctgatcttctcgtcgacataggt 275
           ||||||||| ||||||||||  |||||||| || ||||||||||||||||||||||||||
Sbjct: 686 gaagacgaagagcgagcctcttgatccttttcccagcctgatcttctcgtcgacataggt 627

                                                                       
Query: 276 gatttccagcttgacttcgctctcgcccccgtatcggaaacccaaggagcctaccttcag 335
           ||| |||||||| |||||||||||||| || ||  | || |||| |||||||||||||| 
Sbjct: 626 gatctccagcttaacttcgctctcgccaccatactgaaaccccagggagcctaccttcac 567

                                                                       
Query: 336 ttccgggggctcaaatatgacctgaatccacttactgtctaatacattcagcttgccttt 395
           ||| || ||||| ||||||||||||||||||||||  || |  |||||||||||||||||
Sbjct: 566 ttctggtggctcgaatatgacctgaatccacttaccatccagcacattcagcttgccttt 507

             
Query: 396 ca 397
           ||
Sbjct: 506 ca 505
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>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09,
              complete sequence
          Length = 152732

 Score =  170 bits (86), Expect = 2e-39
 Identities = 155/178 (87%)
 Strand = Plus / Plus

                                                                          
Query: 216    gaagacgaaaagcgagcctcgggatcctttcccgagcctgatcttctcgtcgacataggt 275
              ||||||||| ||||||||||  |||||||| || ||||||||||||||||||||||||||
Sbjct: 126157 gaagacgaagagcgagcctcttgatccttttcccagcctgatcttctcgtcgacataggt 126216

                                                                          
Query: 276    gatttccagcttgacttcgctctcgcccccgtatcggaaacccaaggagcctaccttcag 335
              ||| |||||||| |||||||||||||| || ||  | || |||| |||||||||||||| 
Sbjct: 126217 gatctccagcttaacttcgctctcgccaccatactgaaaccccagggagcctaccttcac 126276

                                                                        
Query: 336    ttccgggggctcaaatatgacctgaatccacttactgtctaatacattcagcttgcct 393
              ||| || ||||| ||||||||||||||||||||||  || |  |||||||||||||||
Sbjct: 126277 ttctggtggctcgaatatgacctgaatccacttaccatccagcacattcagcttgcct 126334
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  170 bits (86), Expect = 2e-39
 Identities = 155/178 (87%)
 Strand = Plus / Plus

                                                                            
Query: 216      gaagacgaaaagcgagcctcgggatcctttcccgagcctgatcttctcgtcgacataggt 275
                ||||||||| ||||||||||  |||||||| || ||||||||||||||||||||||||||
Sbjct: 30722426 gaagacgaagagcgagcctcttgatccttttcccagcctgatcttctcgtcgacataggt 30722485

                                                                            
Query: 276      gatttccagcttgacttcgctctcgcccccgtatcggaaacccaaggagcctaccttcag 335
                ||| |||||||| |||||||||||||| || ||  | || |||| |||||||||||||| 
Sbjct: 30722486 gatctccagcttaacttcgctctcgccaccatactgaaaccccagggagcctaccttcac 30722545

                                                                          
Query: 336      ttccgggggctcaaatatgacctgaatccacttactgtctaatacattcagcttgcct 393
                ||| || ||||| ||||||||||||||||||||||  || |  |||||||||||||||
Sbjct: 30722546 ttctggtggctcgaatatgacctgaatccacttaccatccagcacattcagcttgcct 30722603
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>gb|AY106916.1| Zea mays PCO102443 mRNA sequence
          Length = 546

 Score =  170 bits (86), Expect = 2e-39
 Identities = 146/166 (87%)
 Strand = Plus / Minus

                                                                       
Query: 209 gtcttaggaagacgaaaagcgagcctcgggatcctttcccgagcctgatcttctcgtcga 268
           |||| |||||||||||||||||||||| ||| ||| |||| |||||||||||||||||||
Sbjct: 270 gtctaaggaagacgaaaagcgagcctctggaccctctccctagcctgatcttctcgtcga 211

                                                                       
Query: 269 cataggtgatttccagcttgacttcgctctcgcccccgtatcggaaacccaaggagccta 328
           |||||||||| ||||||||||||||||||||||| |||||  | || ||||||||||| |
Sbjct: 210 cataggtgatctccagcttgacttcgctctcgccaccgtactgaaaccccaaggagccga 151

                                                         
Query: 329 ccttcagttccgggggctcaaatatgacctgaatccacttactgtc 374
           |||||||||| || |  || || | |||||||||||| ||||||||
Sbjct: 150 ccttcagttctggtgcttcgaacacgacctgaatccatttactgtc 105
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>emb|BX293565.25| Zebrafish DNA sequence from clone DKEY-268M13 in linkage group 22,
              complete sequence
          Length = 160930

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 104    aagcagttgtgcagacaccca 124
              |||||||||||||||||||||
Sbjct: 146728 aagcagttgtgcagacaccca 146748
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>emb|BX005203.7| Zebrafish DNA sequence from clone DKEY-110C1 in linkage group 22,
            complete sequence
          Length = 214843

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 104  aagcagttgtgcagacaccca 124
            |||||||||||||||||||||
Sbjct: 9746 aagcagttgtgcagacaccca 9726
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>ref|NM_122001.2| Arabidopsis thaliana structural molecule AT5G19940 mRNA, complete
           cds
          Length = 1110

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 agcttgacttcgctctcgcccccgtatcggaaacccaaggagcctaccttcagttccggg 342
           ||||| |||||||| |||  |||||||  |||  |||| || || ||||| | |||||| 
Sbjct: 707 agcttcacttcgctttcgaacccgtatttgaactccaaagatccaaccttgatttccgga 648

                                           
Query: 343 ggctcaaatatgacctgaatccacttactgtc 374
           ||||||||||| ||||| | ||||| ||||||
Sbjct: 647 ggctcaaatatcacctgcacccactcactgtc 616
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>gb|AY261360.1| African swine fever virus isolate Kenya 1950, complete genome
          Length = 193886

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 99     tgtgcaagcagttgtgcagacacc 122
              |||||||||| |||||||||||||
Sbjct: 105537 tgtgcaagcacttgtgcagacacc 105514
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>emb|CR388023.12| Zebrafish DNA sequence from clone DKEY-245J10 in linkage group 7,
             complete sequence
          Length = 137408

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    aaattaatatcataaaaaac 68
             ||||||||||||||||||||
Sbjct: 35540 aaattaatatcataaaaaac 35521
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>ref|XM_670452.1| Plasmodium berghei strain ANKA hypothetical protein (PB000610.00.0)
            partial mRNA
          Length = 1317

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 54   aatatcataaaaaactactt 73
            ||||||||||||||||||||
Sbjct: 1034 aatatcataaaaaactactt 1053
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>emb|CR388159.9| Zebrafish DNA sequence from clone DKEYP-15D11 in linkage group 7,
              complete sequence
          Length = 174456

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     aaattaatatcataaaaaac 68
              ||||||||||||||||||||
Sbjct: 171544 aaattaatatcataaaaaac 171563
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>gb|AY320039.1| Homo sapiens KIR_wt47 long haplotype gene, complete sequence
          Length = 218963

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 70     actttgtgggctttatctctgaat 93
              |||||||||||||| |||||||||
Sbjct: 182509 actttgtgggctttttctctgaat 182486



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 70    actttgtgggctttatctctgaat 93
             |||||||||||||| |||||||||
Sbjct: 76012 actttgtgggctttttctctgaat 75989
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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 169     atggtggcatggtgccatac 188
               ||||||||||||||||||||
Sbjct: 2839021 atggtggcatggtgccatac 2839040
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>emb|AL133414.4| Human DNA sequence from clone RP5-1060P11 on chromosome 19. Contains
              ESTs, STSs and GSSs. Contains 10 natural killer cell
              receptors, including the KIR2DL2, KIR2DL4, KIR2DS1 and
              KIR2DS2 genes for killer cell two domain long cytoplasmic
              tail immunoglobulin-like receptor 2 and 4 and and short
              cytoplasmic tail immunoglobulin-like receptor 1 and 2 and
              the KIR3DL2 and KIR3DS1 genes for killer cell three domain
              short cytoplasmic tail immunoglobulin-like receptor 2 and
              short cytoplasmic tail immunoglobulin-like receptor 1,
              complete sequence
          Length = 159169

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 70     actttgtgggctttatctctgaat 93
              |||||||||||||| |||||||||
Sbjct: 113559 actttgtgggctttttctctgaat 113536
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>gb|AC110747.3| Homo sapiens, clone RP11-103L16, complete sequence
          Length = 140919

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     gtagaaattaatatcataaa 64
              ||||||||||||||||||||
Sbjct: 112530 gtagaaattaatatcataaa 112511
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>gb|AY060505.1| Arabidopsis thaliana AT5g19940/F28I16_90 mRNA, complete cds
          Length = 720

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 agcttgacttcgctctcgcccccgtatcggaaacccaaggagcctaccttcagttccggg 342
           ||||| |||||||| |||  |||||||  |||  |||| || || ||||| | |||||| 
Sbjct: 638 agcttcacttcgctttcgaacccgtatttgaactccaaagatccaaccttgatttccgga 579

                                           
Query: 343 ggctcaaatatgacctgaatccacttactgtc 374
           ||||||||||| ||||| | ||||| ||||||
Sbjct: 578 ggctcaaatatcacctgcacccactcactgtc 547
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>gb|AY052240.1| Arabidopsis thaliana AT5g19940/F28I16_90 mRNA, complete cds
          Length = 1027

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 agcttgacttcgctctcgcccccgtatcggaaacccaaggagcctaccttcagttccggg 342
           ||||| |||||||| |||  |||||||  |||  |||| || || ||||| | |||||| 
Sbjct: 649 agcttcacttcgctttcgaacccgtatttgaactccaaagatccaaccttgatttccgga 590

                                           
Query: 343 ggctcaaatatgacctgaatccacttactgtc 374
           ||||||||||| ||||| | ||||| ||||||
Sbjct: 589 ggctcaaatatcacctgcacccactcactgtc 558
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>emb|BX831085.1|CNS09ZDE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS56ZF04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 941

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 agcttgacttcgctctcgcccccgtatcggaaacccaaggagcctaccttcagttccggg 342
           ||||| |||||||| |||  |||||||  |||  |||| || || ||||| | |||||| 
Sbjct: 632 agcttcacttcgctttcgaacccgtatttgaactccaaagatccaaccttgatttccgga 573

                                           
Query: 343 ggctcaaatatgacctgaatccacttactgtc 374
           ||||||||||| ||||| | ||||| ||||||
Sbjct: 572 ggctcaaatatcacctgcacccactcactgtc 541
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>emb|BX830841.1|CNS09ZI7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS2ZF06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 915

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 agcttgacttcgctctcgcccccgtatcggaaacccaaggagcctaccttcagttccggg 342
           ||||| |||||||| |||  |||||||  |||  |||| || || ||||| | |||||| 
Sbjct: 636 agcttcacttcgctttcgaacccgtatttgaactccaaagatccaaccttgatttccgga 577

                                           
Query: 343 ggctcaaatatgacctgaatccacttactgtc 374
           ||||||||||| ||||| | ||||| ||||||
Sbjct: 576 ggctcaaatatcacctgcacccactcactgtc 545
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>gb|AY087141.1| Arabidopsis thaliana clone 32193 mRNA, complete sequence
          Length = 978

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 agcttgacttcgctctcgcccccgtatcggaaacccaaggagcctaccttcagttccggg 342
           ||||| |||||||| |||  |||||||  |||  |||| || || ||||| | |||||| 
Sbjct: 707 agcttcacttcgctttcgaacccgtatttgaactccaaagatccaaccttgatttccgga 648

                                           
Query: 343 ggctcaaatatgacctgaatccacttactgtc 374
           ||||||||||| ||||| | ||||| ||||||
Sbjct: 647 ggctcaaatatcacctgcacccactcactgtc 616
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>gb|AF296836.1|F28I16 Arabidopsis thaliana BAC F28I16
          Length = 84334

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                         
Query: 283   agcttgacttcgctctcgcccccgtatcggaaacccaaggagcctaccttcagttccggg 342
             ||||| |||||||| |||  |||||||  |||  |||| || || ||||| | |||||| 
Sbjct: 29310 agcttcacttcgctttcgaacccgtatttgaactccaaagatccaaccttgatttccgga 29251

                                             
Query: 343   ggctcaaatatgacctgaatccacttactgtc 374
             ||||||||||| ||||| | ||||| ||||||
Sbjct: 29250 ggctcaaatatcacctgcacccactcactgtc 29219
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>emb|AM259430.1| African swine fever virus partial B602L gene, isolate Co 62
          Length = 357

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 99  tgtgcaagcagttgtgcagacacc 122
           |||||||||| |||||||||||||
Sbjct: 121 tgtgcaagcacttgtgcagacacc 144
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>emb|AM259429.1| African swine fever virus partial B602L gene, isolate M61
          Length = 357

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 99  tgtgcaagcagttgtgcagacacc 122
           |||||||||| |||||||||||||
Sbjct: 121 tgtgcaagcacttgtgcagacacc 144
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>emb|AM259424.1| African swine fever virus partial B602L gene, isolate Bur 90/1
          Length = 255

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 99  tgtgcaagcagttgtgcagacacc 122
           |||||||||| |||||||||||||
Sbjct: 190 tgtgcaagcacttgtgcagacacc 213
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>emb|AM259423.1| African swine fever virus partial B602L gene, isolate Bur 84/2
          Length = 255

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 99  tgtgcaagcagttgtgcagacacc 122
           |||||||||| |||||||||||||
Sbjct: 190 tgtgcaagcacttgtgcagacacc 213
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>emb|AM259422.1| African swine fever virus partial B602L gene, isolate Bur 84/1
          Length = 255

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 99  tgtgcaagcagttgtgcagacacc 122
           |||||||||| |||||||||||||
Sbjct: 190 tgtgcaagcacttgtgcagacacc 213
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>emb|AM259421.1| African swine fever virus partial B602L gene, isolate Hind II 59
          Length = 255

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 99  tgtgcaagcagttgtgcagacacc 122
           |||||||||| |||||||||||||
Sbjct: 190 tgtgcaagcacttgtgcagacacc 213
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>emb|AM259419.1| African swine fever virus partial B602L gene, isolate Uga 95/1
          Length = 375

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 99  tgtgcaagcagttgtgcagacacc 122
           |||||||||| |||||||||||||
Sbjct: 274 tgtgcaagcacttgtgcagacacc 297



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 99  tgtgcaagcagttgtgcagacacc 122
           |||||||||| |||||||||||||
Sbjct: 46  tgtgcaagcacttgtgcagacacc 69
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>emb|AM259415.1| African swine fever virus partial B602L gene, isolate Ben 97/3
          Length = 147

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 99  tgtgcaagcagttgtgcagacacc 122
           |||||||||| |||||||||||||
Sbjct: 82  tgtgcaagcacttgtgcagacacc 105
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>gb|BC097450.1| Rattus norvegicus echinoderm microtubule associated protein like 1,
           mRNA (cDNA clone MGC:114510 IMAGE:7456735), complete cds
          Length = 2618

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 313 aaacccaaggagcctaccttcagt 336
           ||||||||||||||||| ||||||
Sbjct: 559 aaacccaaggagcctacattcagt 582
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>ref|NM_001025741.1| Rattus norvegicus echinoderm microtubule associated protein like 1
           (Eml1), mRNA
          Length = 2618

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 313 aaacccaaggagcctaccttcagt 336
           ||||||||||||||||| ||||||
Sbjct: 559 aaacccaaggagcctacattcagt 582
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>gb|AC147247.5| Mus musculus BAC clone RP23-468K14 from 8, complete sequence
          Length = 184377

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   cataggtgatttccagcttg 288
             ||||||||||||||||||||
Sbjct: 24871 cataggtgatttccagcttg 24852
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>gb|AC139848.4| Mus musculus BAC clone RP23-358O17 from 8, complete sequence
          Length = 241809

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    cataggtgatttccagcttg 288
              ||||||||||||||||||||
Sbjct: 221438 cataggtgatttccagcttg 221419


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,191,613
Number of Sequences: 3902068
Number of extensions: 3191613
Number of successful extensions: 55915
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55828
Number of HSP's gapped (non-prelim): 81
length of query: 397
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 375
effective length of database: 17,147,199,772
effective search space: 6430199914500
effective search space used: 6430199914500
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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