>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
(High molecular weight salivary mucin MG1) (Sublingual
gland mucin)
Length = 5703
Score = 28.5 bits (62), Expect = 4.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 272 SPSISPGTTLLTPKYNPTAKD*RLTEATFVQAAAMG 379
+PS +PGTT + P+ TA T +T ++A+G
Sbjct: 3904 NPSSTPGTTPIPPELTTTATTPAATSSTVTPSSALG 3939
Score = 27.3 bits (59), Expect = 9.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 272 SPSISPGTTLLTPKYNPTAKD*RLTEATFVQAAAMG 379
+PS +PGTT + P TA T +T ++A+G
Sbjct: 3375 NPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALG 3410
Score = 27.3 bits (59), Expect = 9.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 272 SPSISPGTTLLTPKYNPTAKD*RLTEATFVQAAAMG 379
+PS +PGTT + P TA T +T ++A+G
Sbjct: 2148 NPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALG 2183
>NMT1_UROFA (O00057) Protein NMT1 homolog (Planta-induced rust protein 1)|
Length = 341
Score = 27.3 bits (59), Expect = 9.2
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 58 GCCCYCMCLYIYHQ 17
GCCC+C LYI ++
Sbjct: 194 GCCCFCSILYIANE 207
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,152,715
Number of Sequences: 219361
Number of extensions: 1280657
Number of successful extensions: 2976
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2975
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)