>RL4_TREDE (P61070) 50S ribosomal protein L4|
          Length = 211

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 118 HKRIATAITPNRHILDGGTGRPPLQRVSAEARRSD 222
           +KR+ TA T  R  + G   +P  Q+ +  ARR D
Sbjct: 42  NKRVGTACTKGRAEVHGSNSKPYSQKGTGRARRGD 76

>INSL3_BOVIN (O77801) Insulin-like 3 precursor (Leydig insulin-like peptide)|
           (Ley-I-L) (Relaxin-like factor) [Contains: Insulin-like
           3 B' chain; Insulin-like 3 B chain; Insulin-like 3 A
           chain]
          Length = 132

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +1

Query: 103 STRH*HKRIATAITPNRHILDGGTGRPPL 189
           ++RH H R ATAI P RH    G  R  L
Sbjct: 98  ASRHHHHRRATAINPARHCCLSGCTRQDL 126

>RNH_THET8 (P29253) Ribonuclease H (EC 3.1.26.4) (RNase H)|
          Length = 166

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +1

Query: 136 AITPNR---HILDGGTGRPPLQRVSAEARR 216
           A+ P+R   H + G TG P  +RV  EARR
Sbjct: 115 AMAPHRVRFHFVKGHTGHPENERVDREARR 144

>RNH_THET2 (Q72IE1) Ribonuclease H (EC 3.1.26.4) (RNase H)|
          Length = 166

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +1

Query: 136 AITPNR---HILDGGTGRPPLQRVSAEARR 216
           A+ P+R   H + G TG P  +RV  EARR
Sbjct: 115 AMAPHRVRFHFVKGHTGHPENERVDREARR 144

>RL4_TREPA (O83220) 50S ribosomal protein L4|
          Length = 216

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 118 HKRIATAITPNRHILDGGTGRPPLQRVSAEARRSD 222
           +KR+ TA T  R  + G   +P  Q+ +  ARR D
Sbjct: 42  NKRLGTACTKGRSEVHGSNTKPYKQKGTGRARRGD 76


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,839,474
Number of Sequences: 219361
Number of extensions: 588126
Number of successful extensions: 1677
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1677
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)