ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast71f04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1... 38 0.006
2DYHB_CHLRE (Q39565) Dynein beta chain, flagellar outer arm 38 0.006
3HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2... 37 0.013
4HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3... 37 0.016
5P3C2G_MOUSE (O70167) Phosphatidylinositol-4-phosphate 3-kinase C... 30 1.2
6TRPC_XANAC (Q8PQ47) Indole-3-glycerol phosphate synthase (EC 4.1... 30 2.0
7NU189_SCHPO (Q9UTK4) Nucleoporin nup189 (Nuclear pore protein nu... 29 2.6
8ING1_HUMAN (Q9UK53) Inhibitor of growth protein 1 28 4.5
9RPOM_NEUCR (P38671) DNA-directed RNA polymerase, mitochondrial p... 28 7.6
10ACHA5_RAT (P20420) Neuronal acetylcholine receptor protein, alph... 27 10.0
11PRIA_LENED (Q01200) Protein priA precursor 27 10.0
12PMP3_CANAL (Q9P824) Plasma membrane proteolipid 3 homolog 27 10.0
13Y338_CHLMU (Q9PKX2) Putative metal-binding lipoprotein TC0338 pr... 27 10.0

>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1)
          Length = 445

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 14/33 (42%), Positives = 25/33 (75%)
 Frame = -2

Query: 312 FVLPSASRDGSLSVAISLQAEHMEKFRKMIFDF 214
           F++PS   DGS+++AI+L + H+ +F+K  +DF
Sbjct: 413 FLIPSRDGDGSMTLAINLFSSHLSRFKKYFYDF 445



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>DYHB_CHLRE (Q39565) Dynein beta chain, flagellar outer arm|
          Length = 4568

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = +3

Query: 60   KIRLAQSGKREGKTCRNYVCNQRIIAASYNYSG-AACLFLRCALDACFIPLIRSQRSSSG 236
            ++R  QS K   KTC+  +C+  I A SY Y G   CL +    D CFI L ++QR   G
Sbjct: 1858 QLRYIQSEKT--KTCQVNICDAEI-AYSYEYIGNCGCLCITPLTDRCFITLTQAQRLVLG 1914

Query: 237  TSPYARPA 260
             +P A PA
Sbjct: 1915 GAP-AGPA 1921



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>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2)
          Length = 446

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 14/33 (42%), Positives = 25/33 (75%)
 Frame = -2

Query: 312 FVLPSASRDGSLSVAISLQAEHMEKFRKMIFDF 214
           F++PS + DGS+++AI+L + H+  F+K  +DF
Sbjct: 414 FLIPSQNGDGSMTLAINLFSSHLSLFKKYFYDF 446



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>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3)
          Length = 445

 Score = 36.6 bits (83), Expect = 0.016
 Identities = 14/33 (42%), Positives = 25/33 (75%)
 Frame = -2

Query: 312 FVLPSASRDGSLSVAISLQAEHMEKFRKMIFDF 214
           F++PS + DGS+++AI+L + H+  F+K  +DF
Sbjct: 413 FLIPSQNGDGSMTLAINLFSSHLSLFKKHFYDF 445



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>P3C2G_MOUSE (O70167) Phosphatidylinositol-4-phosphate 3-kinase C2|
           domain-containing gamma polypeptide (EC 2.7.1.154)
           (Phosphoinositide 3-Kinase-C2-gamma) (PtdIns-3-kinase C2
           gamma) (PI3K-C2gamma)
          Length = 1506

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = -3

Query: 209 QRNKTSVQRATQKQTSSPGVIVGCSNDSLITHVVPARFPFPLSTLGKTNFVHLYQISDKC 30
           Q+NK+ +Q   QK   +PG +   S D           PF L+ L    F H+++IS +C
Sbjct: 356 QKNKSVIQLHLQKNRDTPGKLSRKSEDD--------HSPFHLNQL--LEFTHIWKISRQC 405

Query: 29  I 27
           +
Sbjct: 406 L 406



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>TRPC_XANAC (Q8PQ47) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)|
          Length = 265

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 14/42 (33%)
 Frame = +3

Query: 132 IAASYNYSGAACL--------------FLRCALDACFIPLIR 215
           IA SY + GA CL              +LR A DAC +P++R
Sbjct: 79  IAVSYEFGGATCLSVLTDVDFFQGSDAYLRQARDACTLPVLR 120



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>NU189_SCHPO (Q9UTK4) Nucleoporin nup189 (Nuclear pore protein nup189)|
          Length = 1778

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 203  NKTSVQRATQKQTSSPGVIVGCSNDSLITHVVPARFP 93
            + TS +    K+   P + V   NDS +TH  P  FP
Sbjct: 950  SSTSNEAGNLKKYDQPNLKVSGKNDSFVTHHTPGAFP 986



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>ING1_HUMAN (Q9UK53) Inhibitor of growth protein 1|
          Length = 422

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 18/60 (30%), Positives = 24/60 (40%)
 Frame = +3

Query: 132 IAASYNYSGAACLFLRCALDACFIPLIRSQRSSSGTSPYARPAARWPPTGCRRGWRWGAR 311
           I +S  + G     LRC   + + P  +S     G S  A   +RWPP      WR   R
Sbjct: 66  IGSSRCWGGPCSSALRCGWFSSWPPPSKSAIPIGGGSRGAGRVSRWPPPHWLEAWRVSPR 125



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>RPOM_NEUCR (P38671) DNA-directed RNA polymerase, mitochondrial precursor (EC|
           2.7.7.6)
          Length = 1423

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 8   LTCSLNRYICRKFDKDAQNSSCPKWKEGRENVQEL 112
           L  S  R I  K +KD  ++S  +W+E  E++Q++
Sbjct: 355 LPMSQQREIQSKLEKDCVDASLARWREENESLQKM 389



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>ACHA5_RAT (P20420) Neuronal acetylcholine receptor protein, alpha-5 subunit|
           precursor
          Length = 452

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 258 AARWPPTGCRRGWRWG 305
           A RW PTG RRG R G
Sbjct: 6   AGRWRPTGARRGTRGG 21



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>PRIA_LENED (Q01200) Protein priA precursor|
          Length = 258

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 216 SQRSSSGTSPYARPAARWPPTGCRRGWRW 302
           +  +S+ TSP + P +  PP  C  GW W
Sbjct: 108 AHHTSTHTSPSSTPTST-PPPQCSNGWDW 135



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>PMP3_CANAL (Q9P824) Plasma membrane proteolipid 3 homolog|
          Length = 55

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -1

Query: 82 PLWARRILCIFIKFP 38
          PLW   +LCIFI FP
Sbjct: 29 PLWINLVLCIFIWFP 43



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>Y338_CHLMU (Q9PKX2) Putative metal-binding lipoprotein TC0338 precursor|
          Length = 326

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 143 LQLLRGCLFVSALRAGRLFYSFDQKSKIIFRNFSICSACSEMATDRL 283
           L  L GC  +S+  +GR   S D++  I+  N  I    S +  DR+
Sbjct: 16  LLCLAGCFVISSCSSGRGNKSIDERIHILSMNRMIYDCVSRITGDRV 62


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,208,671
Number of Sequences: 219361
Number of extensions: 867204
Number of successful extensions: 2774
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2774
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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