| Clone Name | rbast70h10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL662779.10| Mouse DNA sequence from clone RP23-177A4 on chromosome 11 Contains the Kif2b gene for kinesin family member 28, complete sequence Length = 231926 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 aagacaattattaacagaaact 24 |||||||||||||||||||||| Sbjct: 65922 aagacaattattaacagaaact 65901
>gb|AC018541.7| Homo sapiens chromosome 8, clone RP11-108E14, complete sequence Length = 156674 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 acaggaacagacaatagcaaa 133 ||||||||||||||||||||| Sbjct: 69154 acaggaacagacaatagcaaa 69134
>gb|CP000317.1| Polaromonas sp. JS666 plasmid 1, complete sequence Length = 360405 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 agccagcgcaagcttccctgt 302 ||||||||||||||||||||| Sbjct: 8227 agccagcgcaagcttccctgt 8207
>emb|AL139352.16| Human DNA sequence from clone RP11-445H22 on chromosome 20 Contains the 5' end of the ADA gene for adenosine deaminase, a novel gene, the 3' end of a novel gene, the WISP2 gene for WNT1 inducible signaling pathway protein 2 and a CpG island, complete sequence Length = 107260 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 atgtttctgtgccaggcaccg 212 ||||||||||||||||||||| Sbjct: 18523 atgtttctgtgccaggcaccg 18503
>gb|AC021955.11| Homo sapiens chromosome 8, clone RP11-238G17, complete sequence Length = 192139 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 acaggaacagacaatagcaaa 133 ||||||||||||||||||||| Sbjct: 180351 acaggaacagacaatagcaaa 180371
>gb|AE007287.1| Sinorhizobium meliloti 1021 plasmid pSymA section 93 of 121 of the complete plasmid sequence Length = 11403 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gaggaaaccttcggtcccgt 281 |||||||||||||||||||| Sbjct: 10940 gaggaaaccttcggtcccgt 10959
>emb|AL691484.14| Mouse DNA sequence from clone RP23-230C2 on chromosome 4 Contains the Atp6v1g1 gene for 13kD lysosomal H+ transporting ATPase V1 subunit G variant 1, four novel genes (including 1700018C11Rik), a ribosomal protein L35a (Rpl35a) pseudogene and two CpG islands, complete sequence Length = 116289 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 tgagctcttcttactggccg 168 |||||||||||||||||||| Sbjct: 51405 tgagctcttcttactggccg 51386
>gb|AC114738.4| Homo sapiens BAC clone CTD-2192M1 from 4, complete sequence Length = 134697 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 caaatgcacagacacagaat 149 |||||||||||||||||||| Sbjct: 52111 caaatgcacagacacagaat 52092 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,822,196 Number of Sequences: 3902068 Number of extensions: 2822196 Number of successful extensions: 51995 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51976 Number of HSP's gapped (non-prelim): 19 length of query: 372 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 350 effective length of database: 17,147,199,772 effective search space: 6001519920200 effective search space used: 6001519920200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)