| Clone Name | rbast70g08 |
|---|---|
| Clone Library Name | barley_pub |
>C86A2_ARATH (O23066) Cytochrome P450 86A2 (EC 1.14.-.-)| Length = 553 Score = 36.6 bits (83), Expect = 0.015 Identities = 16/28 (57%), Positives = 21/28 (75%) Frame = -1 Query: 378 PGHVVEPKLSIILHMKNGLAVTVKRRNV 295 PGH VE K+S+ L MKNGL V V +R++ Sbjct: 486 PGHKVEQKMSLTLFMKNGLLVNVHKRDL 513
>C86A1_ARATH (P48422) Cytochrome P450 86A1 (EC 1.14.-.-) (CYPLXXXVI)| (P450-dependent fatty acid omega-hydroxylase) Length = 513 Score = 34.3 bits (77), Expect = 0.075 Identities = 16/27 (59%), Positives = 20/27 (74%) Frame = -1 Query: 381 VPGHVVEPKLSIILHMKNGLAVTVKRR 301 VPGH VE K+S+ L MKNGL V ++ R Sbjct: 482 VPGHRVEQKMSLTLFMKNGLRVYLQPR 508
>OR1FC_HUMAN (Q8NHA8) Olfactory receptor 1F12 (Hs6M1-35P)| Length = 337 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Frame = +3 Query: 69 HIGVCHNAHYTTHVYSSYFLILVAVYY*AHM--PLLHTYTSTYVHVCT 206 ++ +CH HY+T + LVA + + PLLHT ++H C+ Sbjct: 123 YVAICHPLHYSTIMALRLCASLVAAPWVIAILNPLLHTLMMAHLHFCS 170
>AGRN_RAT (P25304) Agrin precursor| Length = 1959 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Frame = -3 Query: 238 GRTYVATRSGHVHTCTY-VLVYVCKSGMC 155 G TY + HVH CT+ + +YV +G C Sbjct: 466 GHTYASECELHVHACTHQISLYVASAGHC 494
>SYE_BORPA (Q7W3X9) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 481 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = +1 Query: 247 LRPRSAGTY*LAMHGRDVPPLDGDGEPVLHVEN--DGQLGLNDV 372 L+PR GT+ G+ +PP+ D +PV+ N DG ND+ Sbjct: 136 LKPRYDGTW-RPEPGKTLPPVPADRKPVIRFRNPIDGATSWNDM 178
>SYE_BORBR (Q7WFA9) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 481 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = +1 Query: 247 LRPRSAGTY*LAMHGRDVPPLDGDGEPVLHVEN--DGQLGLNDV 372 L+PR GT+ G+ +PP+ D +PV+ N DG ND+ Sbjct: 136 LKPRYDGTW-RPEPGKTLPPVPADRKPVIRFRNPIDGATSWNDM 178
>PLS2_HUMAN (Q9NRY7) Phospholipid scramblase 2 (PL scramblase 2)| (Ca(2+)-dependent phospholipid scramblase 2) Length = 224 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = -2 Query: 170 QEWHVCLVIYCYQNKKIRRIDVCSIVCVVTYSYMCVSCVCVP*LERKWTGMGPQ 9 Q WH CL + +N+K R DV I S C+ C C+ ++ + T + Q Sbjct: 123 QTWHPCLTKFTIKNQK--REDVLKI------SGPCIVCSCIAGVDFEITSLDEQ 168
>SYE_BORPE (Q7VUU5) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 460 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = +1 Query: 247 LRPRSAGTY*LAMHGRDVPPLDGDGEPVLHVEN--DGQLGLNDV 372 L+PR GT+ G+ +PP+ D +PV+ N DG ND+ Sbjct: 115 LKPRYDGTW-RPEPGKTLPPVPADRKPVIRFRNPIDGATSWNDM 157
>PIN7_ARATH (Q940Y5) Auxin efflux carrier component 7 (AtPIN7)| Length = 619 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +2 Query: 23 PSIFFLIRAHTHSLHTYRSMSQRTLYYTRLFFLFSYSGSSILL 151 P + + ++ SL + Q ++YT L FLF Y G+ IL+ Sbjct: 119 PLLIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYRGAKILI 161
>SIT1_YEAST (P39980) Siderophore iron transporter 1 (Siderophore iron| transporter ARN3) (Ferrioxamine B permease) Length = 628 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +2 Query: 17 PYPSIFFLIRAHTHSLHTYRSMSQRTLYYTRLFF 118 P PS LI H++ Y M R +Y LFF Sbjct: 42 PAPSYIELIDPGVHNIEIYAEMYNRPIYRVALFF 75
>BEM46_SCHPO (P54069) Protein bem46| Length = 299 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +2 Query: 110 LFFLFSYSGSSILLSTHATLAYIY*YVRTCMYVSA 214 +F + YSG + L T L ++Y Y +T +Y SA Sbjct: 9 IFNVLKYSGMASLAVTLIALGFLYKYQKTLVYPSA 43
>PIN4_ARATH (Q8RWZ6) Auxin efflux carrier component 4 (AtPIN4)| Length = 616 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +2 Query: 23 PSIFFLIRAHTHSLHTYRSMSQRTLYYTRLFFLFSYSGSSILL 151 P + + + SL + Q ++YT L FLF Y G+ +L+ Sbjct: 119 PLLIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLI 161
>RR3_CYAME (Q85FV7) Chloroplast 30S ribosomal protein S3| Length = 205 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +3 Query: 9 LGAHTRPFSF*LGHTHTAYTHIGVCHNAHYTTHVYS 116 +G T P F LG THT H +H+ H YS Sbjct: 1 MGQKTHPVGFRLGITHT--------HQSHWFAHQYS 28
>PLS1_HUMAN (O15162) Phospholipid scramblase 1 (PL scramblase 1)| (Ca(2+)-dependent phospholipid scramblase 1) (Erythrocyte phospholipid scramblase) (MmTRA1b) Length = 318 Score = 27.3 bits (59), Expect = 9.1 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = -2 Query: 173 MQEWHVCLVIYCYQNKKIRRIDVCSIVCVVTYSYMCVSCVC 51 +Q WH CL + QN+K R DV I S CV C C Sbjct: 207 IQTWHPCLPKFTIQNEK--REDVLKI------SGPCVVCSC 239
>NAS13_CAEEL (Q20191) Zinc metalloproteinase nas-13 precursor (EC 3.4.24.21)| (Nematode astacin 13) Length = 527 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 5/43 (11%) Frame = +2 Query: 11 GGPYPSIFFLIRAHTHSLHTYRSM-----SQRTLYYTRLFFLF 124 G P P FL+ + T S HT M S +++ + LFF+F Sbjct: 55 GCPSPPFLFLLSSSTDSSHTLSLMPSPTSSSASVFSSHLFFVF 97 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,087,888 Number of Sequences: 219361 Number of extensions: 934422 Number of successful extensions: 2062 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2019 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2059 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)