| Clone Name | rbast70f12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY857761.1| Triticum monococcum peroxidase 7 (POX7) mRNA, complete cds Length = 1319 Score = 398 bits (201), Expect = e-108 Identities = 249/265 (93%), Gaps = 5/265 (1%) Strand = Plus / Minus Query: 18 tttggctatcaaagtaccagaggcatcgatttctctattattcttcaacaattagcaata 77 |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1313 tttggctatcaacgtaccagaggcatcgatttctctattattcctcaacaattagcaata 1254 Query: 78 agcagtagccagacctgaaaccattcttgggtaggcacagaactgcgacacgaccacccc 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1253 agcagtagccagacctgaaaccattcttgggtaggcacagaactgcgacacgacca---- 1198 Query: 138 aaacctatgtcaaacatatcgctcgctcccacaccagagctcccgtgagacacctacagg 197 |||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||||| Sbjct: 1197 -aacctatgtcaagcatatcgatcgctccgacaccagagctcccatgagacacctacagg 1139 Query: 198 cctaccgtagaaccacattcagaagtccagcacccggaacggagcgacctgcttctccag 257 ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1138 cctaccgtagaaccaggttcagaaatccagcacccggaacggcgcgacctgcttctccag 1079 Query: 258 cggaggccgcccgccgttggcgacg 282 ||| ||||||||||||||||||||| Sbjct: 1078 cggcggccgcccgccgttggcgacg 1054
>emb|AL159152.11| Human DNA sequence from clone RP11-165N12 on chromosome 13q32.1-33.3 Contains a novel gene, complete sequence Length = 160404 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 tttctctattattcttcaacaa 68 |||||||||||||||||||||| Sbjct: 38724 tttctctattattcttcaacaa 38745
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 gcagtagccagacctgaaaccatt 102 |||||||||| ||||||||||||| Sbjct: 621283 gcagtagccacacctgaaaccatt 621306
>gb|AC151631.3| Callicebus moloch clone LB5-52D9, complete sequence Length = 69705 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 gcagtagccagacctgaaaccatt 102 |||||||||| ||||||||||||| Sbjct: 2992 gcagtagccacacctgaaaccatt 3015
>gb|AC148206.3| Callicebus moloch clone LB5-384O14, complete sequence Length = 160507 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 gcagtagccagacctgaaaccatt 102 |||||||||| ||||||||||||| Sbjct: 153671 gcagtagccacacctgaaaccatt 153694
>emb|AL357353.12| Human DNA sequence from clone RP11-251L16 on chromosome 10, complete sequence Length = 129800 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 tcttcaacaattagcaataa 78 |||||||||||||||||||| Sbjct: 46814 tcttcaacaattagcaataa 46833
>gb|AC146926.3| Callithrix jacchus clone CH259-265E13, complete sequence Length = 125956 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 gcagtagccagacctgaaaccatt 102 |||||||||| ||||||||||||| Sbjct: 107715 gcagtagccacacctgaaaccatt 107738
>gb|AC146925.5| Callithrix jacchus clone CH259-254J2, complete sequence Length = 160998 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 gcagtagccagacctgaaaccatt 102 |||||||||| ||||||||||||| Sbjct: 746 gcagtagccacacctgaaaccatt 769
>gb|AE004890.1| Pseudomonas aeruginosa PAO1, section 451 of 529 of the complete genome Length = 12326 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cgacctgcttctccagcgga 261 |||||||||||||||||||| Sbjct: 10397 cgacctgcttctccagcgga 10378
>gb|AC148187.3| Saimiri boliviensis boliviensis clone CH254-373M5, complete sequence Length = 180635 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 gcagtagccagacctgaaaccatt 102 |||||||||| ||||||||||||| Sbjct: 112424 gcagtagccacacctgaaaccatt 112447
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 gcagtagccagacctgaaaccatt 102 |||||||||| ||||||||||||| Sbjct: 600338 gcagtagccacacctgaaaccatt 600361
>gb|AC151373.4| Aotus nancymaae clone CH258-480P12, complete sequence Length = 171933 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 gcagtagccagacctgaaaccatt 102 |||||||||| ||||||||||||| Sbjct: 48984 gcagtagccacacctgaaaccatt 49007
>dbj|AB010573.1| Burkholderia glumae DNA, insertion sequence IS1419 Length = 1215 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 agcgacctgcttctccagcg 259 |||||||||||||||||||| Sbjct: 508 agcgacctgcttctccagcg 489 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,917,332 Number of Sequences: 3902068 Number of extensions: 1917332 Number of successful extensions: 39472 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 39446 Number of HSP's gapped (non-prelim): 25 length of query: 282 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 260 effective length of database: 17,147,199,772 effective search space: 4458271940720 effective search space used: 4458271940720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)