ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast70e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_194476.1| Oryza sativa (japonica cultivar-group) putative... 270 3e-69
2gb|AC079632.4| Oryza sativa (japonica cultivar-group) chromosome... 270 3e-69
3gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 270 3e-69
4gb|AC166065.1| Oryza sativa (japonica cultivar-group) chromosome... 270 3e-69
5gb|AC108883.1| Genomic sequence for (japonica cultivar-group) cu... 270 3e-69
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 270 3e-69
7dbj|AK121858.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 3e-69
8dbj|AK068970.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 3e-69
9gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 270 3e-69
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.069
11dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.069
12emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 46 0.069
13ref|XM_478355.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.27
14gb|AC122138.2| Homo sapiens chromosome 4 clone RP11-818C3, compl... 44 0.27
15gb|AC017063.8| Homo sapiens BAC clone RP11-354H17 from 4, comple... 44 0.27
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
17dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
18emb|AJ606310.1| Propionibacterium freudenreichii subsp. shermani... 44 0.27
19dbj|AK070461.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.27
20ref|NM_191255.1| Oryza sativa (japonica cultivar-group), predic... 42 1.1
21ref|XM_365411.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.1
22emb|CR555306.1| Azoarcus sp. EbN1 complete genome 42 1.1
23gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.1
24dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
25dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
26dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
27gb|AE005012.1| Halobacterium sp. NRC-1 section 43 of 170 of the ... 42 1.1
28dbj|AK111225.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
29emb|AL807250.9| Mouse DNA sequence from clone RP23-99K18 on chro... 42 1.1
30ref|XM_471152.1| Oryza sativa (japonica cultivar-group), predic... 40 4.2
31ref|XM_470681.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.2
32gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 4.2
33ref|XM_366085.1| Magnaporthe grisea 70-15 predicted protein (MG1... 40 4.2
34gb|AY658691.1| Synthetic construct Peudomonas aeruginosa clone F... 40 4.2
35gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 4.2
36gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.2
37gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.2
38gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genom... 40 4.2
39emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 4.2
40emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete ... 40 4.2
41emb|BX324004.6| Zebrafish DNA sequence from clone CH211-284O17 i... 40 4.2
42gb|AC146348.42| Pan troglodytes clone rp43-34i24, complete sequence 40 4.2
43dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 4.2
44gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 4.2
45dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
46dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
47dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
48gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genom... 40 4.2
49gb|AE004537.1| Pseudomonas aeruginosa PAO1, section 98 of 529 of... 40 4.2
50dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.2
51emb|AL954339.10| Zebrafish DNA sequence from clone CH211-221J21 ... 40 4.2
52dbj|AK119852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.2
53emb|AL663011.2|OSJN00215 Oryza sativa genomic DNA, chromosome 4,... 40 4.2
54emb|AL831724.7| Mouse DNA sequence from clone RP23-405G17 on chr... 40 4.2
55emb|AL929405.8| Mouse DNA sequence from clone RP24-323B22 on chr... 40 4.2 
>ref|NM_194476.1| Oryza sativa (japonica cultivar-group) putative receptor-like protein
            kinase (OSJNBa0046L02.6), mRNA
          Length = 2442

 Score =  270 bits (136), Expect = 3e-69
 Identities = 166/176 (94%)
 Strand = Plus / Minus

                                                                        
Query: 120  agtcgtcctgcacgcagaagatggtaggcttgactgggtcggtgatctcgacggtgccct 179
            |||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 2440 agtcgtcctggacgcagaagatggtgggcttgacgggctcggtgatctcgacggtgccct 2381

                                                                        
Query: 180  cgagcatcttggcgaccttgcccatggaggggcgcatgtcggcgcggtcctggaggcacc 239
            ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||
Sbjct: 2380 cgagcatcttggcgaccttgcccatggagggcctcatgtcggcgcggtcctgaaggcacc 2321

                                                                    
Query: 240  acatggccgtcttgaccatgcgctcgacggtggcgacgctgtcggcgtcgtcgtcg 295
            |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 2320 acatggccgtcttgaccatgcgctcgacggtggcgaggctggcggggtcgtcgtcg 2265
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>gb|AC079632.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0046L02, complete sequence
          Length = 142381

 Score =  270 bits (136), Expect = 3e-69
 Identities = 166/176 (94%)
 Strand = Plus / Minus

                                                                         
Query: 120   agtcgtcctgcacgcagaagatggtaggcttgactgggtcggtgatctcgacggtgccct 179
             |||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 62333 agtcgtcctggacgcagaagatggtgggcttgacgggctcggtgatctcgacggtgccct 62274

                                                                         
Query: 180   cgagcatcttggcgaccttgcccatggaggggcgcatgtcggcgcggtcctggaggcacc 239
             ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||
Sbjct: 62273 cgagcatcttggcgaccttgcccatggagggcctcatgtcggcgcggtcctgaaggcacc 62214

                                                                     
Query: 240   acatggccgtcttgaccatgcgctcgacggtggcgacgctgtcggcgtcgtcgtcg 295
             |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 62213 acatggccgtcttgaccatgcgctcgacggtggcgaggctggcggggtcgtcgtcg 62158
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score =  270 bits (136), Expect = 3e-69
 Identities = 166/176 (94%)
 Strand = Plus / Minus

                                                                         
Query: 120   agtcgtcctgcacgcagaagatggtaggcttgactgggtcggtgatctcgacggtgccct 179
             |||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 76439 agtcgtcctggacgcagaagatggtgggcttgacgggctcggtgatctcgacggtgccct 76380

                                                                         
Query: 180   cgagcatcttggcgaccttgcccatggaggggcgcatgtcggcgcggtcctggaggcacc 239
             ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||
Sbjct: 76379 cgagcatcttggcgaccttgcccatggagggcctcatgtcggcgcggtcctgaaggcacc 76320

                                                                     
Query: 240   acatggccgtcttgaccatgcgctcgacggtggcgacgctgtcggcgtcgtcgtcg 295
             |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 76319 acatggccgtcttgaccatgcgctcgacggtggcgaggctggcggggtcgtcgtcg 76264
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>gb|AC166065.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1136E01,
             complete sequence
          Length = 105139

 Score =  270 bits (136), Expect = 3e-69
 Identities = 166/176 (94%)
 Strand = Plus / Minus

                                                                         
Query: 120   agtcgtcctgcacgcagaagatggtaggcttgactgggtcggtgatctcgacggtgccct 179
             |||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 81578 agtcgtcctggacgcagaagatggtgggcttgacgggctcggtgatctcgacggtgccct 81519

                                                                         
Query: 180   cgagcatcttggcgaccttgcccatggaggggcgcatgtcggcgcggtcctggaggcacc 239
             ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||
Sbjct: 81518 cgagcatcttggcgaccttgcccatggagggcctcatgtcggcgcggtcctgaaggcacc 81459

                                                                     
Query: 240   acatggccgtcttgaccatgcgctcgacggtggcgacgctgtcggcgtcgtcgtcg 295
             |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 81458 acatggccgtcttgaccatgcgctcgacggtggcgaggctggcggggtcgtcgtcg 81403
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>gb|AC108883.1| Genomic sequence for (japonica cultivar-group) cultivar Nipponbare
             clone OJ1136E01, from chromosome 10, complete sequence
          Length = 113856

 Score =  270 bits (136), Expect = 3e-69
 Identities = 166/176 (94%)
 Strand = Plus / Plus

                                                                         
Query: 120   agtcgtcctgcacgcagaagatggtaggcttgactgggtcggtgatctcgacggtgccct 179
             |||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 37418 agtcgtcctggacgcagaagatggtgggcttgacgggctcggtgatctcgacggtgccct 37477

                                                                         
Query: 180   cgagcatcttggcgaccttgcccatggaggggcgcatgtcggcgcggtcctggaggcacc 239
             ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||
Sbjct: 37478 cgagcatcttggcgaccttgcccatggagggcctcatgtcggcgcggtcctgaaggcacc 37537

                                                                     
Query: 240   acatggccgtcttgaccatgcgctcgacggtggcgacgctgtcggcgtcgtcgtcg 295
             |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 37538 acatggccgtcttgaccatgcgctcgacggtggcgaggctggcggggtcgtcgtcg 37593
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10,
             complete sequence
          Length = 22685906

 Score =  270 bits (136), Expect = 3e-69
 Identities = 166/176 (94%)
 Strand = Plus / Minus

                                                                         
Query: 120   agtcgtcctgcacgcagaagatggtaggcttgactgggtcggtgatctcgacggtgccct 179
             |||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 76439 agtcgtcctggacgcagaagatggtgggcttgacgggctcggtgatctcgacggtgccct 76380

                                                                         
Query: 180   cgagcatcttggcgaccttgcccatggaggggcgcatgtcggcgcggtcctggaggcacc 239
             ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||
Sbjct: 76379 cgagcatcttggcgaccttgcccatggagggcctcatgtcggcgcggtcctgaaggcacc 76320

                                                                     
Query: 240   acatggccgtcttgaccatgcgctcgacggtggcgacgctgtcggcgtcgtcgtcg 295
             |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 76319 acatggccgtcttgaccatgcgctcgacggtggcgaggctggcggggtcgtcgtcg 76264
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>dbj|AK121858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102I19, full
            insert sequence
          Length = 2811

 Score =  270 bits (136), Expect = 3e-69
 Identities = 166/176 (94%)
 Strand = Plus / Minus

                                                                        
Query: 120  agtcgtcctgcacgcagaagatggtaggcttgactgggtcggtgatctcgacggtgccct 179
            |||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 2472 agtcgtcctggacgcagaagatggtgggcttgacgggctcggtgatctcgacggtgccct 2413

                                                                        
Query: 180  cgagcatcttggcgaccttgcccatggaggggcgcatgtcggcgcggtcctggaggcacc 239
            ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||
Sbjct: 2412 cgagcatcttggcgaccttgcccatggagggcctcatgtcggcgcggtcctgaaggcacc 2353

                                                                    
Query: 240  acatggccgtcttgaccatgcgctcgacggtggcgacgctgtcggcgtcgtcgtcg 295
            |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 2352 acatggccgtcttgaccatgcgctcgacggtggcgaggctggcggggtcgtcgtcg 2297
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>dbj|AK068970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001K01, full
           insert sequence
          Length = 2639

 Score =  270 bits (136), Expect = 3e-69
 Identities = 166/176 (94%)
 Strand = Plus / Plus

                                                                       
Query: 120 agtcgtcctgcacgcagaagatggtaggcttgactgggtcggtgatctcgacggtgccct 179
           |||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 32  agtcgtcctggacgcagaagatggtgggcttgacgggctcggtgatctcgacggtgccct 91

                                                                       
Query: 180 cgagcatcttggcgaccttgcccatggaggggcgcatgtcggcgcggtcctggaggcacc 239
           ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||
Sbjct: 92  cgagcatcttggcgaccttgcccatggagggcctcatgtcggcgcggtcctgaaggcacc 151

                                                                   
Query: 240 acatggccgtcttgaccatgcgctcgacggtggcgacgctgtcggcgtcgtcgtcg 295
           |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 152 acatggccgtcttgaccatgcgctcgacggtggcgaggctggcggggtcgtcgtcg 207
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  270 bits (136), Expect = 3e-69
 Identities = 166/176 (94%)
 Strand = Plus / Minus

                                                                         
Query: 120   agtcgtcctgcacgcagaagatggtaggcttgactgggtcggtgatctcgacggtgccct 179
             |||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 76437 agtcgtcctggacgcagaagatggtgggcttgacgggctcggtgatctcgacggtgccct 76378

                                                                         
Query: 180   cgagcatcttggcgaccttgcccatggaggggcgcatgtcggcgcggtcctggaggcacc 239
             ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||
Sbjct: 76377 cgagcatcttggcgaccttgcccatggagggcctcatgtcggcgcggtcctgaaggcacc 76318

                                                                     
Query: 240   acatggccgtcttgaccatgcgctcgacggtggcgacgctgtcggcgtcgtcgtcg 295
             |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 76317 acatggccgtcttgaccatgcgctcgacggtggcgaggctggcggggtcgtcgtcg 76262
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 273     cgacgctgtcggcgtcgtcgtcgacgg 299
               ||||||||||| |||||||||||||||
Sbjct: 5399135 cgacgctgtcgtcgtcgtcgtcgacgg 5399161
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>dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0529B09
          Length = 138188

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 273   cgacgctgtcggcgtcgtcgtcgacgg 299
             ||||||||||| |||||||||||||||
Sbjct: 30069 cgacgctgtcgtcgtcgtcgtcgacgg 30095
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 284    gcgtcgtcgtcgacggtgaggag 306
              |||||||||||||||||||||||
Sbjct: 451291 gcgtcgtcgtcgacggtgaggag 451269
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>ref|XM_478355.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2262

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 280 gtcggcgtcgtcgtcgacggtgaggaggatgcgg 313
           |||| ||||||||||||||| |||||||| ||||
Sbjct: 179 gtcgccgtcgtcgtcgacggcgaggaggaggcgg 146
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>gb|AC122138.2| Homo sapiens chromosome 4 clone RP11-818C3, complete sequence
          Length = 112876

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 24   tattatgcacgtaactaacaat 45
            ||||||||||||||||||||||
Sbjct: 1858 tattatgcacgtaactaacaat 1837
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>gb|AC017063.8| Homo sapiens BAC clone RP11-354H17 from 4, complete sequence
          Length = 193092

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 24     tattatgcacgtaactaacaat 45
              ||||||||||||||||||||||
Sbjct: 192950 tattatgcacgtaactaacaat 192929
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 280      gtcggcgtcgtcgtcgacggtgaggaggatgcgg 313
                |||| ||||||||||||||| |||||||| ||||
Sbjct: 19447431 gtcgccgtcgtcgtcgacggcgaggaggaggcgg 19447398
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>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0409B11
          Length = 168354

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 280    gtcggcgtcgtcgtcgacggtgaggaggatgcgg 313
              |||| ||||||||||||||| |||||||| ||||
Sbjct: 136969 gtcgccgtcgtcgtcgacggcgaggaggaggcgg 136936
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>emb|AJ606310.1| Propionibacterium freudenreichii subsp. shermanii 5S gene for
           transcarboxylase 5S subunit, strain ATCC 13673
          Length = 1518

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 171 cggtgccctcgagcatcttggcgacc 196
           |||||||||||||||||| |||||||
Sbjct: 793 cggtgccctcgagcatctcggcgacc 768
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>dbj|AK070461.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A04, full
           insert sequence
          Length = 2262

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 280 gtcggcgtcgtcgtcgacggtgaggaggatgcgg 313
           |||| ||||||||||||||| |||||||| ||||
Sbjct: 179 gtcgccgtcgtcgtcgacggcgaggaggaggcgg 146
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>ref|NM_191255.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 642

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 267 cggtggcgacgctgtcggcgtcgtcgtcg 295
           |||||||| |||||||| |||||||||||
Sbjct: 218 cggtggcggcgctgtcgtcgtcgtcgtcg 246
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>ref|XM_365411.1| Magnaporthe grisea 70-15 hypothetical protein (MG02113.4) partial
           mRNA
          Length = 603

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 165 tctcgacggtgccctcgagca 185
           |||||||||||||||||||||
Sbjct: 379 tctcgacggtgccctcgagca 359
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 293     tcgacggtgaggaggatgcgg 313
               |||||||||||||||||||||
Sbjct: 3519800 tcgacggtgaggaggatgcgg 3519820
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 271     ggcgacgctgtcggcgtcgtcgtcg 295
               ||||| |||||||||||||||||||
Sbjct: 2526965 ggcgaggctgtcggcgtcgtcgtcg 2526989



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   cgagcatcttggcgaccttg 199
             ||||||||||||||||||||
Sbjct: 53502 cgagcatcttggcgaccttg 53521
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 267      cggtggcgacgctgtcggcgtcgtcgtcg 295
                |||||||| |||||||| |||||||||||
Sbjct: 31561366 cggtggcggcgctgtcgtcgtcgtcgtcg 31561394
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>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0435B05
          Length = 150997

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 267   cggtggcgacgctgtcggcgtcgtcgtcg 295
             |||||||| |||||||| |||||||||||
Sbjct: 74389 cggtggcggcgctgtcgtcgtcgtcgtcg 74417
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>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0046E05
          Length = 162776

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 267    cggtggcgacgctgtcggcgtcgtcgtcg 295
              |||||||| |||||||| |||||||||||
Sbjct: 155430 cggtggcggcgctgtcgtcgtcgtcgtcg 155458
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>gb|AE005012.1| Halobacterium sp. NRC-1 section 43 of 170 of the complete genome
          Length = 10293

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 272  gcgacgctgtcggcgtcgtcg 292
            |||||||||||||||||||||
Sbjct: 6367 gcgacgctgtcggcgtcgtcg 6347
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>dbj|AK111225.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-C12, full
            insert sequence
          Length = 2740

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 263  tcgacggtggcgacgctgtcggcgtcgtcgtcgacgg 299
            ||||||||| || ||||||||||| || |||||||||
Sbjct: 2417 tcgacggtgacgccgctgtcggcgccgccgtcgacgg 2453
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>emb|AL807250.9| Mouse DNA sequence from clone RP23-99K18 on chromosome X, complete
             sequence
          Length = 141025

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 45    tttggctttgttttaacagta 65
             |||||||||||||||||||||
Sbjct: 22115 tttggctttgttttaacagta 22095
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>ref|XM_471152.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2082

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  gccctcgagcatcttggcga 194
            ||||||||||||||||||||
Sbjct: 1191 gccctcgagcatcttggcga 1172
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>ref|XM_470681.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 933

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 gtcgacggtgaggaggatgc 311
           ||||||||||||||||||||
Sbjct: 496 gtcgacggtgaggaggatgc 515
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 265     gacggtggcgacgctgtcggcgtcgtcg 292
               ||||||||||||| ||||| ||||||||
Sbjct: 2238355 gacggtggcgacggtgtcgacgtcgtcg 2238328
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>ref|XM_366085.1| Magnaporthe grisea 70-15 predicted protein (MG10305.4) partial mRNA
          Length = 1488

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 174 tgccctcgagcatcttggcgacct 197
           ||||||||||||||| ||||||||
Sbjct: 694 tgccctcgagcatctcggcgacct 671
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>gb|AY658691.1| Synthetic construct Peudomonas aeruginosa clone FLH041744.01F
           PA1048 gene, partial cds
          Length = 882

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 catcttggcgaccttgccca 203
           ||||||||||||||||||||
Sbjct: 603 catcttggcgaccttgccca 584
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 265     gacggtggcgacgctgtcggcgtcgtcg 292
               ||||||||||||| ||||| ||||||||
Sbjct: 3411848 gacggtggcgacggtgtcgacgtcgtcg 3411821
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>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12,
             complete sequence
          Length = 121293

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 264   cgacggtggcgacgctgtcggcgtcgtcgtcg 295
             |||||||| |||||||| | ||||||||||||
Sbjct: 72252 cgacggtgacgacgctggctgcgtcgtcgtcg 72283
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 292      gtcgacggtgaggaggatgc 311
                ||||||||||||||||||||
Sbjct: 14517522 gtcgacggtgaggaggatgc 14517541
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>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete
              sequence
          Length = 147130

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    gtcgacggtgaggaggatgc 311
              ||||||||||||||||||||
Sbjct: 140185 gtcgacggtgaggaggatgc 140166
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 265     gacggtggcgacgctgtcggcgtcgtcg 292
               ||||||||||||| ||||| ||||||||
Sbjct: 3152931 gacggtggcgacggtgtcgacgtcgtcg 3152904
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>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    gcgtcgtcgtcgacggtgag 303
              ||||||||||||||||||||
Sbjct: 104012 gcgtcgtcgtcgacggtgag 104031
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>emb|BX324004.6| Zebrafish DNA sequence from clone CH211-284O17 in linkage group 12,
             complete sequence
          Length = 136645

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    tcggatattatattattatg 30
             ||||||||||||||||||||
Sbjct: 80970 tcggatattatattattatg 80951
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>gb|AC146348.42| Pan troglodytes clone rp43-34i24, complete sequence
          Length = 165558

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ctaaatataatgaaagtaag 108
             ||||||||||||||||||||
Sbjct: 82893 ctaaatataatgaaagtaag 82874
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 194     accttgcccatggaggggcgcatg 217
               |||||||||||| |||||||||||
Sbjct: 4492054 accttgcccatgtaggggcgcatg 4492031
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 256     catgcgctcgacggtggcgacgctgtcg 283
               |||||||||||||||| ||| |||||||
Sbjct: 3051006 catgcgctcgacggtgacgaagctgtcg 3051033
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     gccctcgagcatcttggcga 194
               ||||||||||||||||||||
Sbjct: 1862776 gccctcgagcatcttggcga 1862795
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 264      cgacggtggcgacgctgtcggcgtcgtcgtcg 295
                |||||||| |||||||| | ||||||||||||
Sbjct: 17941503 cgacggtgacgacgctggctgcgtcgtcgtcg 17941534
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 292      gtcgacggtgaggaggatgc 311
                ||||||||||||||||||||
Sbjct: 14512497 gtcgacggtgaggaggatgc 14512516
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>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete
             sequence
          Length = 135594

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   gtcgacggtgaggaggatgc 311
             ||||||||||||||||||||
Sbjct: 23859 gtcgacggtgaggaggatgc 23840
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>gb|AE004537.1| Pseudomonas aeruginosa PAO1, section 98 of 529 of the complete genome
          Length = 13946

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  catcttggcgaccttgccca 203
            ||||||||||||||||||||
Sbjct: 2055 catcttggcgaccttgccca 2036
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 267     cggtggcgacgctgtcggcg 286
               ||||||||||||||||||||
Sbjct: 5796986 cggtggcgacgctgtcggcg 5797005
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>emb|AL954339.10| Zebrafish DNA sequence from clone CH211-221J21 in linkage group 12,
              complete sequence
          Length = 203958

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     ggatattatattattatgca 32
              ||||||||||||||||||||
Sbjct: 124583 ggatattatattattatgca 124602
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>dbj|AK119852.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-F10, full
            insert sequence
          Length = 3552

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 273  cgacgctgtcggcgtcgtcg 292
            ||||||||||||||||||||
Sbjct: 1328 cgacgctgtcggcgtcgtcg 1347
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>emb|AL663011.2|OSJN00215 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0080H08,
            complete sequence
          Length = 138127

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 175  gccctcgagcatcttggcga 194
            ||||||||||||||||||||
Sbjct: 6013 gccctcgagcatcttggcga 6032
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>emb|AL831724.7| Mouse DNA sequence from clone RP23-405G17 on chromosome X, complete
             sequence
          Length = 100597

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   gaagatggtaggcttgactg 155
             ||||||||||||||||||||
Sbjct: 70067 gaagatggtaggcttgactg 70048
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>emb|AL929405.8| Mouse DNA sequence from clone RP24-323B22 on chromosome 4, complete
              sequence
          Length = 118016

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     ctaacaatttggctttgttt 57
              ||||||||||||||||||||
Sbjct: 112038 ctaacaatttggctttgttt 112019


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,637,273
Number of Sequences: 3902068
Number of extensions: 2637273
Number of successful extensions: 66163
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64989
Number of HSP's gapped (non-prelim): 1174
length of query: 322
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 300
effective length of database: 17,147,199,772
effective search space: 5144159931600
effective search space used: 5144159931600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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