>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                            
Query: 273      aagctagttgacggcggtgcagacccggcgcacctcgccggcgctgccggtcttgacccc 332
                |||||||||||||||||||||||| ||||| | ||||||| ||  |||||||||||| ||
Sbjct: 33534018 aagctagttgacggcggtgcagacgcggcggatctcgccgtcggagccggtcttgacgcc 33534077

                     
Query: 333      gatcc 337
                |||||
Sbjct: 33534078 gatcc 33534082



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 169      aaaaacaccctgcatctgcg 188
                ||||||||||||||||||||
Sbjct: 33533884 aaaaacaccctgcatctgcg 33533903

>emb|AL442117.1|H0421H08 Oryza sativa genomic DNA, chromosome X, BAC clone: H0421H08, complete
             sequence
          Length = 55574

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                         
Query: 273   aagctagttgacggcggtgcagacccggcgcacctcgccggcgctgccggtcttgacccc 332
             |||||||||||||||||||||||| ||||| | ||||||| ||  |||||||||||| ||
Sbjct: 47553 aagctagttgacggcggtgcagacgcggcggatctcgccgtcggagccggtcttgacgcc 47612

                  
Query: 333   gatcc 337
             |||||
Sbjct: 47613 gatcc 47617



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   aaaaacaccctgcatctgcg 188
             ||||||||||||||||||||
Sbjct: 47419 aaaaacaccctgcatctgcg 47438

>dbj|AK058886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C06, full
            insert sequence
          Length = 1316

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 273  aagctagttgacggcggtgcagacccggcgcacctcgccggcgctgccggtcttgacccc 332
            |||||||||||||||||||||||| ||||| | ||||||| ||  |||||||||||| ||
Sbjct: 1099 aagctagttgacggcggtgcagacgcggcggatctcgccgtcggagccggtcttgacgcc 1040

                 
Query: 333  gatcc 337
            |||||
Sbjct: 1039 gatcc 1035



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 169  aaaaacaccctgcatctgcg 188
            ||||||||||||||||||||
Sbjct: 1233 aaaaacaccctgcatctgcg 1214

>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13,
              complete sequence
          Length = 152264

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                          
Query: 273    aagctagttgacggcggtgcagacccggcgcacctcgccggcgctgccggtcttgacccc 332
              |||||||||||||||||||||||| ||||| | ||||||| ||  |||||||||||| ||
Sbjct: 110307 aagctagttgacggcggtgcagacgcggcggatctcgccgtcggagccggtcttgacgcc 110366

                   
Query: 333    gatcc 337
              |||||
Sbjct: 110367 gatcc 110371



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    aaaaacaccctgcatctgcg 188
              ||||||||||||||||||||
Sbjct: 110173 aaaaacaccctgcatctgcg 110192

>ref|XM_474177.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1014

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                        
Query: 276  ctagttgacggcggtgcagacccggcgcacctcgccggcgctgccggtcttgaccccgat 335
            ||||||||||||||||||||| ||||| | ||||||| ||  |||||||||||| |||||
Sbjct: 1014 ctagttgacggcggtgcagacgcggcggatctcgccgtcggagccggtcttgacgccgat 955

              
Query: 336  cc 337
            ||
Sbjct: 954  cc 953

>tpe|BN000587.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx58 gene for
            class III peroxidase 58 precursor, exons 1-4
          Length = 5790

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                        
Query: 276  ctagttgacggcggtgcagacccggcgcacctcgccggcgctgccggtcttgaccccgat 335
            ||||||||||||||||||||| ||||| | ||||||| ||  |||||||||||| |||||
Sbjct: 5790 ctagttgacggcggtgcagacgcggcggatctcgccgtcggagccggtcttgacgccgat 5731

              
Query: 336  cc 337
            ||
Sbjct: 5730 cc 5729

>gb|AY104176.1| Zea mays PCO083783 mRNA sequence
          Length = 1312

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 277  tagttgacggcggtgcagacccggcgcacctcgccggcgctgccggtcttgaccccgatc 336
            |||||||||||||||||||| ||||| | ||||||| ||  |||||||||||  ||||||
Sbjct: 1099 tagttgacggcggtgcagacgcggcgtatctcgccgtcggcgccggtcttgaggccgatc 1040

             
Query: 337  c 337
            |
Sbjct: 1039 c 1039

>gb|AC076961.17| Homo sapiens 3 BAC RP11-392H1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 60701

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 12    aaaagcagagggattgctttt 32
             |||||||||||||||||||||
Sbjct: 37863 aaaagcagagggattgctttt 37843

>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 296    cccggcgcacctcgccggcgc 316
              |||||||||||||||||||||
Sbjct: 208737 cccggcgcacctcgccggcgc 208757

>ref|NM_189917.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1485

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 ccggcgcacctcgccggcgc 316
           ||||||||||||||||||||
Sbjct: 40  ccggcgcacctcgccggcgc 59

>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    cctcgccggcgctgccggtc 324
              ||||||||||||||||||||
Sbjct: 487628 cctcgccggcgctgccggtc 487647

>gb|AC139211.13| Mus musculus chromosome 6, clone RP23-302O24, complete sequence
          Length = 154129

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    cccattccatcccacatccc 97
             ||||||||||||||||||||
Sbjct: 46903 cccattccatcccacatccc 46922

>emb|CR708980.2|CNS0GA00 Tetraodon nigroviridis full-length cDNA
          Length = 1309

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 178  ctgcatctgcgctgcatcac 197
            ||||||||||||||||||||
Sbjct: 1285 ctgcatctgcgctgcatcac 1266

>emb|CR704671.2|CNS0G6OB Tetraodon nigroviridis full-length cDNA
          Length = 1209

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 178  ctgcatctgcgctgcatcac 197
            ||||||||||||||||||||
Sbjct: 1197 ctgcatctgcgctgcatcac 1178

>emb|CR702828.2|CNS0G594 Tetraodon nigroviridis full-length cDNA
          Length = 862

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 ctgcatctgcgctgcatcac 197
           ||||||||||||||||||||
Sbjct: 835 ctgcatctgcgctgcatcac 816

>emb|CR689896.2|CNS0FV9W Tetraodon nigroviridis full-length cDNA
          Length = 1227

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 178  ctgcatctgcgctgcatcac 197
            ||||||||||||||||||||
Sbjct: 1201 ctgcatctgcgctgcatcac 1182

>emb|BX036340.1|CNS0907C Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA8AF07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 901

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 156 cacacacgcgagcaaaaacaccct 179
           |||||||||| |||||||||||||
Sbjct: 625 cacacacgcgcgcaaaaacaccct 648

>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 295    acccggcgcacctcgccggc 314
              ||||||||||||||||||||
Sbjct: 251670 acccggcgcacctcgccggc 251651

>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14
          Length = 349305

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 295    acccggcgcacctcgccggc 314
              ||||||||||||||||||||
Sbjct: 189380 acccggcgcacctcgccggc 189361

>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12
          Length = 349028

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    acccggcgcacctcgccggc 314
              ||||||||||||||||||||
Sbjct: 164320 acccggcgcacctcgccggc 164339

>gb|AC025765.6| Homo sapiens chromosome 5 clone CTB-57H20, complete sequence
          Length = 218515

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 8      acacaaaagcagagggattgcttt 31
              ||||||||| ||||||||||||||
Sbjct: 157491 acacaaaagaagagggattgcttt 157468

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 297      ccggcgcacctcgccggcgc 316
                ||||||||||||||||||||
Sbjct: 39818251 ccggcgcacctcgccggcgc 39818270

>gb|AC093684.4| Homo sapiens BAC clone RP11-681B22 from 2, complete sequence
          Length = 160142

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    cgccggcgctgccggtcttg 327
              ||||||||||||||||||||
Sbjct: 150073 cgccggcgctgccggtcttg 150092

>gb|AC068490.4| Homo sapiens BAC clone RP11-789K7 from 2, complete sequence
          Length = 156900

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 13     aaagcagagggattgcttttgttt 36
              |||| |||||||||||||||||||
Sbjct: 109739 aaagtagagggattgcttttgttt 109716

>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0470A12
          Length = 185095

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    ccggcgcacctcgccggcgc 316
              ||||||||||||||||||||
Sbjct: 169150 ccggcgcacctcgccggcgc 169169

>gb|AC171011.2| Gallus gallus BAC clone CH261-112C5 from chromosome ul, complete sequence
          Length = 230767

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 141    atgagcacactaacgcacacacgc 164
              ||||||||||| ||||||||||||
Sbjct: 177849 atgagcacactcacgcacacacgc 177872

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 305     cctcgccggcgctgccggtc 324
               ||||||||||||||||||||
Sbjct: 3076574 cctcgccggcgctgccggtc 3076593

>dbj|AK065343.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013007P01, full
           insert sequence
          Length = 1676

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 ccggcgcacctcgccggcgc 316
           ||||||||||||||||||||
Sbjct: 61  ccggcgcacctcgccggcgc 80


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,026,682
Number of Sequences: 3902068
Number of extensions: 2026682
Number of successful extensions: 35999
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35880
Number of HSP's gapped (non-prelim): 119
length of query: 348
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 326
effective length of database: 17,147,199,772
effective search space: 5589987125672
effective search space used: 5589987125672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)