>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                           
Query: 276     agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 335
               ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| 
Sbjct: 2976971 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 2976912

                                
Query: 336     acgaagccgacgacgta 352
               | |||||||||||||||
Sbjct: 2976911 atgaagccgacgacgta 2976895



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                           
Query: 276     agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 335
               ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| 
Sbjct: 2948575 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 2948516

                                
Query: 336     acgaagccgacgacgta 352
               | |||||||||||||||
Sbjct: 2948515 atgaagccgacgacgta 2948499



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 327     ctctgctgcacgaagccgacgacgta 352
               ||||||||||||| ||||||||||||
Sbjct: 2941843 ctctgctgcacgatgccgacgacgta 2941818

>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15,
              complete sequence
          Length = 166282

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                          
Query: 276    agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 335
              ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| 
Sbjct: 114458 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 114399

                               
Query: 336    acgaagccgacgacgta 352
              | |||||||||||||||
Sbjct: 114398 atgaagccgacgacgta 114382



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                         
Query: 276   agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 335
             ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| 
Sbjct: 86062 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 86003

                              
Query: 336   acgaagccgacgacgta 352
             | |||||||||||||||
Sbjct: 86002 atgaagccgacgacgta 85986



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 327   ctctgctgcacgaagccgacgacgta 352
             ||||||||||||| ||||||||||||
Sbjct: 79330 ctctgctgcacgatgccgacgacgta 79305

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                           
Query: 276     agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 335
               ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| 
Sbjct: 2977082 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 2977023

                                
Query: 336     acgaagccgacgacgta 352
               | |||||||||||||||
Sbjct: 2977022 atgaagccgacgacgta 2977006



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                           
Query: 276     agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 335
               ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| 
Sbjct: 2948686 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 2948627

                                
Query: 336     acgaagccgacgacgta 352
               | |||||||||||||||
Sbjct: 2948626 atgaagccgacgacgta 2948610



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 327     ctctgctgcacgaagccgacgacgta 352
               ||||||||||||| ||||||||||||
Sbjct: 2941954 ctctgctgcacgatgccgacgacgta 2941929

>dbj|AK106358.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-A09, full
            insert sequence
          Length = 1661

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                        
Query: 276  agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 335
            ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| 
Sbjct: 1274 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 1215

                             
Query: 336  acgaagccgacgacgta 352
            | |||||||||||||||
Sbjct: 1214 atgaagccgacgacgta 1198

>dbj|AK106420.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B02, full
            insert sequence
          Length = 1590

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 327  ctctgctgcacgaagccgacgacgta 352
            ||||||||||||| ||||||||||||
Sbjct: 1359 ctctgctgcacgatgccgacgacgta 1334

>gb|AC062016.5| Homo sapiens BAC clone RP11-59P4 from 2, complete sequence
          Length = 187799

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 32     aaaaggaaacaaatcttaaag 52
              |||||||||||||||||||||
Sbjct: 166903 aaaaggaaacaaatcttaaag 166923

>gb|AE001438.3| Clostridium acetobutylicum ATCC 824 megaplasmid pSOL1, complete
             sequence
          Length = 192000

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 31    gaaaaggaaacaaatcttaaa 51
             |||||||||||||||||||||
Sbjct: 20866 gaaaaggaaacaaatcttaaa 20886

>gb|AC147646.2| Gallus gallus BAC clone CH261-13L1 from chromosome unknown, complete
              sequence
          Length = 238934

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 83     tgtaagataattatttcacat 103
              |||||||||||||||||||||
Sbjct: 170214 tgtaagataattatttcacat 170234

>gb|AC163351.2| Mus musculus BAC clone RP23-150D4 from chromosome 13, complete sequence
          Length = 214062

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 97     ttcacatctggatctgatagcaga 120
              ||||||||||||||||| ||||||
Sbjct: 104873 ttcacatctggatctgaaagcaga 104896

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 244     cgtagtcggccatgtcgaccatca 267
               |||||| |||||||||||||||||
Sbjct: 3121354 cgtagtgggccatgtcgaccatca 3121377

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 244    cgtagtcggccatgtcgaccatca 267
              |||||| |||||||||||||||||
Sbjct: 811765 cgtagtgggccatgtcgaccatca 811742

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 244     cgtagtcggccatgtcgaccatca 267
               |||||| |||||||||||||||||
Sbjct: 2666685 cgtagtgggccatgtcgaccatca 2666708

>gb|AC122402.2| Mus musculus BAC clone RP24-108B4 from chromosome 13, complete sequence
          Length = 175669

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 97     ttcacatctggatctgatagcaga 120
              ||||||||||||||||| ||||||
Sbjct: 172580 ttcacatctggatctgaaagcaga 172557

>emb|BX294143.1| Pirellula sp. strain 1 complete genome; segment 11/24
          Length = 303250

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 244    cgtagtcggccatgtcgaccatca 267
              |||||| |||||||||||||||||
Sbjct: 230174 cgtagtgggccatgtcgaccatca 230151

>gb|AC124657.5| Homo sapiens chromosome 11, clone RP11-624D11, complete sequence
          Length = 155985

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 32     aaaaggaaacaaatcttaaagagc 55
              ||||||||||||||| ||||||||
Sbjct: 132165 aaaaggaaacaaatcataaagagc 132142

>gb|AC037450.6| Homo sapiens chromosome 8, clone RP11-226G12, complete sequence
          Length = 169876

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    tactgatgtgagaaaaggaa 39
             ||||||||||||||||||||
Sbjct: 21405 tactgatgtgagaaaaggaa 21386

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 40       acaaatcttaaagagctttcatcc 63
                ||||||||||||||| ||||||||
Sbjct: 22669535 acaaatcttaaagagatttcatcc 22669512

>emb|BX682231.5| Mouse DNA sequence from clone RP24-369N16 on chromosome 2, complete
            sequence
          Length = 48121

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 96   tttcacatctggatctgata 115
            ||||||||||||||||||||
Sbjct: 8122 tttcacatctggatctgata 8141

>dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1773_H01
          Length = 146543

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    acaaatcttaaagagctttcatcc 63
             ||||||||||||||| ||||||||
Sbjct: 87433 acaaatcttaaagagatttcatcc 87410

>gb|AC154342.2| Mus musculus BAC clone RP23-227D10 from 17, complete sequence
          Length = 199709

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    atgtgagaaaaggaaacaaa 44
             ||||||||||||||||||||
Sbjct: 17838 atgtgagaaaaggaaacaaa 17819

>gb|AC005066.1|AC005066 Homo sapiens BAC clone CTB-118P15 from 8q21, complete sequence
          Length = 226916

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   tactgatgtgagaaaaggaa 39
            ||||||||||||||||||||
Sbjct: 9266 tactgatgtgagaaaaggaa 9285

>emb|CT025832.1| Acinetobacter baumannii str. AYE. Genomics of Multi-Drug Resistance in
             Acinetobacter baumannii
          Length = 100001

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   gcatcaaatcgatttgattg 168
             ||||||||||||||||||||
Sbjct: 18406 gcatcaaatcgatttgattg 18387

>dbj|AB103396.1| Ixodes ovatus genes for 5.8S ribosomal RNA, internal transcribed
           spacer 2, 28S ribosomal RNA, partial and complete
           sequence
          Length = 831

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  atgtgagaaaaggaaacaaa 44
           ||||||||||||||||||||
Sbjct: 295 atgtgagaaaaggaaacaaa 314

>dbj|AB103049.1| Ixodes ovatus genes for 5.8S rRNA, ITS2, 28S rRNA, partial and
           complete sequences, strain:NIO14
          Length = 831

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  atgtgagaaaaggaaacaaa 44
           ||||||||||||||||||||
Sbjct: 293 atgtgagaaaaggaaacaaa 312

>dbj|AB103046.1| Ixodes ovatus genes for 5.8S rRNA, ITS2, 28S rRNA, partial and
           complete sequences, strain:NIO11
          Length = 836

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  atgtgagaaaaggaaacaaa 44
           ||||||||||||||||||||
Sbjct: 296 atgtgagaaaaggaaacaaa 315

>dbj|AB103044.1| Ixodes ovatus genes for ITS2, 28S rRNA, partial sequences,
           strain:NIO9
          Length = 680

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  atgtgagaaaaggaaacaaa 44
           ||||||||||||||||||||
Sbjct: 145 atgtgagaaaaggaaacaaa 164

>dbj|AB103043.1| Ixodes ovatus genes for 5.8S rRNA, ITS2, 28S rRNA, partial and
           complete sequences, strain:NIO8
          Length = 838

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  atgtgagaaaaggaaacaaa 44
           ||||||||||||||||||||
Sbjct: 297 atgtgagaaaaggaaacaaa 316

>emb|CT033757.6| Mouse DNA sequence from clone RP23-125M6 on chromosome 17, complete
             sequence
          Length = 44371

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    atgtgagaaaaggaaacaaa 44
             ||||||||||||||||||||
Sbjct: 14318 atgtgagaaaaggaaacaaa 14337

>emb|AL807800.7| Mouse DNA sequence from clone RP23-438D2 on chromosome 2, complete
             sequence
          Length = 176808

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    aattatttcacatctggatc 110
             ||||||||||||||||||||
Sbjct: 53661 aattatttcacatctggatc 53642


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,129,480
Number of Sequences: 3902068
Number of extensions: 3129480
Number of successful extensions: 61629
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61434
Number of HSP's gapped (non-prelim): 195
length of query: 353
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 331
effective length of database: 17,147,199,772
effective search space: 5675723124532
effective search space used: 5675723124532
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)