>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                        
Query: 225      gttctgcagccacaaagctcaaaatcatgaagctggagat 264
                ||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 34093794 gttctacagccgcaaagctcaaaatcatgaagctggagat 34093755



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 141      tgttccccaaatctatatacacatat 166
                ||||| ||||||||||||||||||||
Sbjct: 18896543 tgttctccaaatctatatacacatat 18896568

>dbj|AP007227.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0032L17
          Length = 165808

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 225   gttctgcagccacaaagctcaaaatcatgaagctggagat 264
             ||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 21308 gttctacagccgcaaagctcaaaatcatgaagctggagat 21269

>gb|AY110316.1| Zea mays CL24857_1 mRNA sequence
          Length = 582

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 225 gttctgcagccacaaagctcaaaatcatgaag 256
           ||||||| |||||||| |||||||||||||||
Sbjct: 181 gttctgcggccacaaaactcaaaatcatgaag 212

>gb|AC116723.13| Mus musculus chromosome 3, clone RP23-266J14, complete sequence
          Length = 184835

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 137    ctgatgttccccaaatctatat 158
              ||||||||||||||||||||||
Sbjct: 107868 ctgatgttccccaaatctatat 107847

>dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0461D06
          Length = 112895

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 141   tgttccccaaatctatatacacatat 166
             ||||| ||||||||||||||||||||
Sbjct: 60076 tgttctccaaatctatatacacatat 60101

>emb|BX950201.12| Zebrafish DNA sequence from clone CH211-101L11 in linkage group 1,
              complete sequence
          Length = 167099

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    cggttcgttcacggttttgg 198
              ||||||||||||||||||||
Sbjct: 134776 cggttcgttcacggttttgg 134795

>emb|AL645817.1| Human DNA sequence from clone RP1-2A2 on chromosome Xq21, complete
              sequence
          Length = 129249

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    aaagctcaaaatcatgaagc 257
              ||||||||||||||||||||
Sbjct: 121998 aaagctcaaaatcatgaagc 122017

>emb|CR762397.7| Zebrafish DNA sequence from clone DKEY-258A22 in linkage group 14,
             complete sequence
          Length = 107563

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    caaaacatctgacatccagg 88
             ||||||||||||||||||||
Sbjct: 62035 caaaacatctgacatccagg 62016

>emb|BX539334.6| Zebrafish DNA sequence from clone DKEYP-4H2 in linkage group 14,
             complete sequence
          Length = 114428

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    caaaacatctgacatccagg 88
             ||||||||||||||||||||
Sbjct: 45529 caaaacatctgacatccagg 45548

>emb|AL807239.5| Zebrafish DNA sequence from clone CH211-231H1 in linkage group 14
             Contains the 5' part of a novel gene similar to human,
             rodent and Oreochromis mossambicus GRIA3 (ionotropic
             glutamate receptor AMPA3) and five CpG islands, complete
             sequence
          Length = 210702

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    caaaacatctgacatccagg 88
             ||||||||||||||||||||
Sbjct: 76567 caaaacatctgacatccagg 76586

>gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J22 map B68, complete
            sequence
          Length = 115851

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    caaattcttcaattcacagg 26
            ||||||||||||||||||||
Sbjct: 9590 caaattcttcaattcacagg 9609

>gb|AC091899.2| Homo sapiens chromosome 5 clone RP11-158D20, complete sequence
          Length = 139253

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    aaacatctgacatccaggca 90
             ||||||||||||||||||||
Sbjct: 44330 aaacatctgacatccaggca 44349

>gb|AC026796.5| Homo sapiens chromosome 5 clone CTD-2292M14, complete sequence
          Length = 151019

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 71   aaacatctgacatccaggca 90
            ||||||||||||||||||||
Sbjct: 5073 aaacatctgacatccaggca 5054

>gb|AC092138.4| Homo sapiens chromosome 16 clone RP11-351A20, complete sequence
          Length = 189505

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   ttctgcagccacaaagctca 245
             ||||||||||||||||||||
Sbjct: 13741 ttctgcagccacaaagctca 13760

>gb|AC009062.8| Homo sapiens chromosome 16 clone RP11-298C15, complete sequence
          Length = 207345

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 226    ttctgcagccacaaagctca 245
              ||||||||||||||||||||
Sbjct: 181659 ttctgcagccacaaagctca 181678

>emb|BX248514.3| Zebrafish DNA sequence from clone CH211-237A6 in linkage group 1,
              complete sequence
          Length = 165693

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    cggttcgttcacggttttgg 198
              ||||||||||||||||||||
Sbjct: 138264 cggttcgttcacggttttgg 138283

>emb|Z84815.1|HS2A2A Human DNA sequence from PAC 2A2 on chromosome X
          Length = 32671

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  aaagctcaaaatcatgaagc 257
            ||||||||||||||||||||
Sbjct: 7252 aaagctcaaaatcatgaagc 7233


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,651,566
Number of Sequences: 3902068
Number of extensions: 2651566
Number of successful extensions: 45396
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45351
Number of HSP's gapped (non-prelim): 45
length of query: 278
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 256
effective length of database: 17,147,199,772
effective search space: 4389683141632
effective search space used: 4389683141632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)