>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)|
           (Ath-ExpBeta-1.1)
          Length = 259

 Score = 35.0 bits (79), Expect = 0.045
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -3

Query: 353 LVARNVIPKNWRPNTFYRSIVQY 285
           +VA NVIP NW+P+  YRSIV +
Sbjct: 237 IVAYNVIPANWKPDESYRSIVNF 259

>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea|
           m I)
          Length = 269

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -3

Query: 353 LVARNVIPKNWRPNTFYRSIVQY 285
           ++A++VIP NWRP+  Y S VQ+
Sbjct: 246 VIAKDVIPANWRPDAVYTSNVQF 268

>EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) (Zea m I)|
           (Fragment)
          Length = 191

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -3

Query: 353 LVARNVIPKNWRPNTFYRSIVQY 285
           ++A+++IP NWRP+  Y S VQ+
Sbjct: 168 VIAKDIIPANWRPDAVYTSNVQF 190

>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)|
           (Ath-ExpBeta-1.4)
          Length = 273

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -3

Query: 353 LVARNVIPKNWRPNTFYRSIVQY 285
           +VA NVIP NW+P   Y+S V +
Sbjct: 251 VVASNVIPANWQPGAIYKSNVNF 273

>GIDA_XANCP (Q8PDG1) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 634

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 213 TELSCWLVGSTEEDDD-*RWPSYLAVLDDGAVEGVGP 320
           T++SCW+  +TE+  D  R   + + L  G +EG+GP
Sbjct: 244 TQVSCWITHTTEQTHDIIRGALHRSPLYSGQIEGIGP 280

>GIDA_XANC8 (Q4UZP9) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 634

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 213 TELSCWLVGSTEEDDD-*RWPSYLAVLDDGAVEGVGP 320
           T++SCW+  +TE+  D  R   + + L  G +EG+GP
Sbjct: 244 TQVSCWITHTTEQTHDIIRGALHRSPLYSGQIEGIGP 280

>MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1|
          Length = 246

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 353 LVARNVIPKNWRPNTFYRSIVQY 285
           LV  +VIP NW+P+T Y S +Q+
Sbjct: 222 LVQDDVIPANWKPDTVYTSKLQF 244

>ECM17_YEAST (P47169) Sulfite reductase [NADPH] beta subunit (EC 1.8.1.2)|
            (Extracellular matrix protein 17)
          Length = 1442

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = +3

Query: 192  LIKTPAKTELSCWLVGSTEEDDD*RWPSYLAVLDDG 299
            L KT A  E+  WL G  E+DDD  WPS      DG
Sbjct: 1013 LPKTTAYHEV--WLEGPEEQDDDPSWPSIFENRKDG 1046

>CORO_CAEEL (Q21624) Coronin-like protein cor-1|
          Length = 605

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = -2

Query: 354 ARRPQRHPQELEAQHLLPLHRPVQLDKMAIVSHRLPPSNQPTSKRA 217
           + RP    Q        P  RPV  D M IV+ R  P ++P S RA
Sbjct: 427 SERPPSSQQPSPRPSASPRPRPVVDDDMGIVTMREAPPSRPASSRA 472

>GIDA_XANOR (Q5H6D9) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 634

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +3

Query: 216 ELSCWLVGSTEEDDD-*RWPSYLAVLDDGAVEGVGP 320
           ++SCW+  +TE+  D  R   + + L  G +EG+GP
Sbjct: 245 QVSCWITQTTEQTHDIIRNALHRSPLYSGQIEGIGP 280

>CRF1_YEAST (Q04930) Transcription factor CRF1 (Corepressor with FHL1 protein|
           1)
          Length = 467

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 274 DGHRQSSSSSVEPTNQQESSVLAGVLINQSINFC 173
           + HRQ  S S   TN+ E  +   +L++  I+ C
Sbjct: 154 ESHRQYHSPSASTTNEDEEDIGVDILVDNHIDSC 187

>EGF_MOUSE (P01132) Pro-epidermal growth factor precursor (EGF) [Contains:|
            Epidermal growth factor]
          Length = 1217

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -2

Query: 339  RHPQELEAQHLLPLHRPVQLDKMAIVSHRLPPSNQPTSKRA 217
            R PQE+E    LP +RPV  +K+    H L  +N    +RA
Sbjct: 1170 RGPQEIEGNSHLPSYRPVGPEKL----HSLQSANGSCHERA 1206

>YDAQ_ECOLI (P76057) Hypothetical protein ydaQ|
          Length = 71

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 255 RLPPSNQPTSKRALFWREF*SINQLI 178
           R+ P  +P SKR + W  +  INQ I
Sbjct: 43  RVSPLGKPDSKRGIIWYNYPKINQFI 68

>PI4KA_BOVIN (O02811) Phosphatidylinositol 4-kinase alpha (EC 2.7.1.67)|
           (PI4-kinase alpha) (PtdIns-4-kinase alpha) (PI4K-alpha)
          Length = 2043

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 17/63 (26%), Positives = 29/63 (46%)
 Frame = -2

Query: 288 VQLDKMAIVSHRLPPSNQPTSKRALFWREF*SINQLISVGNRGGALACSSMPGEISRSVC 109
           V +  +A+++ RLPP  +P  +    +R+F   + L+     G  L     P E    VC
Sbjct: 711 VLIPVIAVLTRRLPPIEEPKPRLQKLFRDFWLYSVLMGFAVEGSGL----WPEEWYEGVC 766

Query: 108 TLA 100
            +A
Sbjct: 767 EIA 769

>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)|
           (Ath-ExpBeta-1.3)
          Length = 264

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 353 LVARNVIPKNWRPNTFYRSIVQY 285
           ++A+ VIP+ W P   Y S V +
Sbjct: 235 IIAKGVIPEKWSPGAIYHSKVNF 257


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,570,994
Number of Sequences: 219361
Number of extensions: 893796
Number of successful extensions: 1861
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1861
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)