ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast69c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1REPS1_HUMAN (Q96D71) RalBP1-associated Eps domain-containing pro... 29 2.3
2YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in... 28 5.2
3NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter ... 28 6.8
4DAL81_YEAST (P21657) Transcriptional activator protein DAL81 (Re... 28 6.8
5FKH_DROME (P14734) Fork head protein 27 8.8
6FGF3_CHICK (P48801) Fibroblast growth factor 3 precursor (FGF-3)... 27 8.8
7HSL7_YEAST (P38274) Protein arginine N-methyltransferase HSL7 (E... 27 8.8

>REPS1_HUMAN (Q96D71) RalBP1-associated Eps domain-containing protein 1|
           (RalBP1-interacting protein 1)
          Length = 744

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +2

Query: 188 QIFIHASQNMNLSRKDISRCHPSLLPALSSGLHASLPASSSRNRRSDA 331
           Q  + A+ N+N  + D +  HP +LPA      AS PASS R  ++D+
Sbjct: 580 QFEVFAASNVNDEQDDEAEKHPEVLPAEK----ASDPASSLRVAKTDS 623



to top

>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I|
          Length = 536

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 33/122 (27%), Positives = 46/122 (37%), Gaps = 4/122 (3%)
 Frame = +2

Query: 47  VESQLITQLSVSLSLIPMSITEITSSSRKS*NTSFCP*GRYSRLHRYQIFIHASQNMNLS 226
           + S   T +S S S  P+S +  TS +  S  TS                  +S     S
Sbjct: 49  LSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSSATLTS 108

Query: 227 RKDISRCHPSLLPALSSGLHASLPASSSRNRRSDATFHSNRCPCCI----PSTITTSNWS 394
               S    S   ALSS   + + +SSS    S +  HS+  P        S++TTS  S
Sbjct: 109 SSSASPTSSSSSHALSSSSSSLVASSSSSGMSSSSLSHSSSVPSSSSSYHSSSMTTSGLS 168

Query: 395 FS 400
            S
Sbjct: 169 SS 170



to top

>NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter protein)|
           (Solute carrier family 4 anion exchanger member 1
           adapter protein) (Lung cancer oncogene 3 protein)
          Length = 796

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +2

Query: 164 RYSRLHRYQIFIHASQNMNLSRKDISRCHPSLLPALSSGLHASLPASSSRN 316
           R S+LHR ++    SQ+  L+ +D+S         +S    +  PASSS N
Sbjct: 46  RISKLHRLRMADILSQSETLASQDLSGDFKKPALPVSPAARSKAPASSSSN 96



to top

>DAL81_YEAST (P21657) Transcriptional activator protein DAL81 (Regulatory|
           protein UGA35)
          Length = 970

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 251 PSLLPALSSGLHASLPASSSRNRRSDATFHSNRCP 355
           P+ L   SSG + ++P SS+  R  +   +SNR P
Sbjct: 185 PNYLKRTSSGANNNMPTSSNSKRMKNFEDYSNRLP 219



to top

>FKH_DROME (P14734) Fork head protein|
          Length = 510

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 200 HASQNMNLSRKDISRCHPSLLPALSSGLH 286
           H  Q   LS    +RCHPSL+    S +H
Sbjct: 408 HQLQQEELSAMMANRCHPSLITDYHSSMH 436



to top

>FGF3_CHICK (P48801) Fibroblast growth factor 3 precursor (FGF-3) (HBGF-3)|
          Length = 220

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 15/57 (26%), Positives = 32/57 (56%)
 Frame = +2

Query: 161 GRYSRLHRYQIFIHASQNMNLSRKDISRCHPSLLPALSSGLHASLPASSSRNRRSDA 331
           GRY  +++ +  ++AS+N N   + + R H       +S L+ ++P+ +S  R++ A
Sbjct: 96  GRYLAMNK-RGRLYASENYNTECEFVERIHELGYNTYASRLYRTVPSGASTKRKASA 151



to top

>HSL7_YEAST (P38274) Protein arginine N-methyltransferase HSL7 (EC 2.1.1.125)|
          Length = 827

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +2

Query: 236 ISRCHPSLLPALSSGLHASLPASSSRNRRSDATFHSNRCPCCIPSTITTSNWSFSH 403
           I R + S +  +SS L       S  NR  +A +  +R P CI S+     W F H
Sbjct: 493 IPRSYSSYIAPISSPLFYQ--KLSQTNRSLEAPWIVHRVPYCILSSRVNEVWRFEH 546


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,055,150
Number of Sequences: 219361
Number of extensions: 712621
Number of successful extensions: 1741
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1740
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top