| Clone Name | rbast65h04 |
|---|---|
| Clone Library Name | barley_pub |
>MINC_PROMA (Q7VDL2) Probable septum site-determining protein minC| Length = 221 Score = 30.8 bits (68), Expect = 1.5 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +2 Query: 5 RPVNDHIEGKLARGNRRRCDNTFRACMTSHEEIVTIHPASTT 130 RPV I K+ARG + + + T EE++ I PA TT Sbjct: 180 RPVQLRIANKIARGPKEKPELGLAEEATIQEEVIVIKPARTT 221
>C13A8_CAEEL (Q27516) Putative cytochrome P450 CYP13A8 (EC 1.14.-.-)| Length = 509 Score = 29.6 bits (65), Expect = 3.2 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 Query: 192 FGGFVSSKIRNLTRTLLAGRCVVEAGWIVTISSWDVMHARNV 67 F F +S R R + G +VEAG V I +W + H +NV Sbjct: 383 FASFANS--RRCMRNTVIGEQIVEAGVDVMIDTWTLHHDKNV 422
>TLR9_HUMAN (Q9NR96) Toll-like receptor 9 precursor (CD289 antigen)| Length = 1032 Score = 29.3 bits (64), Expect = 4.2 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 Query: 44 GNRRRCDNTFRACMTSHEEIVTIHPASTTHL 136 GN RRCD+ CM +HP + +HL Sbjct: 253 GNCRRCDHAPNPCMECPRHFPQLHPDTFSHL 283
>TLR9_FELCA (Q5I2M7) Toll-like receptor 9 precursor (CD289 antigen)| Length = 1031 Score = 28.9 bits (63), Expect = 5.5 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +2 Query: 44 GNRRRCDNTFRACMTSHEEIVTIHPASTTHL 136 GN RRCD+ CM + +HP + +HL Sbjct: 253 GNCRRCDHARNPCMECPKGFPHLHPDTFSHL 283
>DMSA_RHOSH (Q57366) Dimethyl sulfoxide reductase precursor (EC 1.8.99.-) (DMSO| reductase) (DMSOR) Length = 822 Score = 28.9 bits (63), Expect = 5.5 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = -3 Query: 186 GFVSSKIRNLTRTLLAGRCVVEAGWIV 106 G + +IR L R+ +AGR ++ AGW + Sbjct: 340 GLPAEQIRELARSFVAGRTMLAAGWSI 366
>CART1_XENLA (Q91574) Cartilage homeoprotein 1 (CART-1) (XCART1)| Length = 335 Score = 28.9 bits (63), Expect = 5.5 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +1 Query: 136 PRQQSTCEVPYFARNKTSKPLTEHTQH 216 PR+ S+C PY ++T P T T H Sbjct: 251 PREPSSCMTPYSHSSRTDSPYTGFTNH 277
>RFBM_SALMU (Q00473) Mannose-1-phosphate guanylyltransferase [GDP] (EC| 2.7.7.22) (GDP-mannose pyrophosphorylase) (GMP) Length = 473 Score = 28.5 bits (62), Expect = 7.2 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +2 Query: 77 ACMTSHEEIVTIHPASTTHLPANKV 151 AC+T EEI TI +T +PAN V Sbjct: 411 ACITKGEEIFTISENESTFIPANTV 435
>TLR9_MOUSE (Q9EQU3) Toll-like receptor 9 precursor (CD289 antigen)| Length = 1032 Score = 28.1 bits (61), Expect = 9.4 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +2 Query: 44 GNRRRCDNTFRACMTSHEEIVTIHPASTTHL 136 GN RRCD+ C+ ++ + +HP + HL Sbjct: 253 GNCRRCDHAPNPCIECGQKSLHLHPETFHHL 283
>TSPE_BPP22 (P12528) Bifunctional tail protein (Late protein gp9) [Includes:| Tailspike-protein (TSP); Endorhamnosidase (EC 3.2.1.-) (Endo-1,3-alpha-L-rhamnosidase)] Length = 667 Score = 28.1 bits (61), Expect = 9.4 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -2 Query: 145 VGGEVRRRSGMDCYNLFMGCHAC 77 +G EV R SG+ LF GCH C Sbjct: 269 IGVEVHRASGLMAGFLFRGCHFC 291 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,195,770 Number of Sequences: 219361 Number of extensions: 1014053 Number of successful extensions: 2367 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2312 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2367 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)