| Clone Name | rbast65f04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ZP4_RABIT (Q00193) Zona pellucida sperm-binding protein 4 precur... | 29 | 2.6 |
|---|
>ZP4_RABIT (Q00193) Zona pellucida sperm-binding protein 4 precursor (Zona| pellucida sperm-binding protein B) (Zona pellucida glycoprotein ZP-X) (RC55) Length = 540 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/66 (25%), Positives = 25/66 (37%) Frame = +1 Query: 16 GPIFGRRNGHKCLPFGNQTYRKKLHVTQRNKTSTNNLTNQILNISYAGLSLA*HNSSRDD 195 GPI+ + C P G Q+ + R + S N N NIS G + + Sbjct: 440 GPIYLHCSVSVCQPTGTQSCTVTCPIDSRRRNSDINFQNSTANISSKGPMILLQATEDPS 499 Query: 196 SNIHPH 213 +H H Sbjct: 500 EKLHKH 505 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,303,580 Number of Sequences: 219361 Number of extensions: 935815 Number of successful extensions: 2131 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 2104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2131 length of database: 80,573,946 effective HSP length: 85 effective length of database: 61,928,261 effective search space used: 1486278264 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)