>emb|AL049635.8|HSJ1083G3 Human DNA sequence from clone RP5-1083G3 on chromosome 11p13 Contains
             GSSs and a putative CpG island, complete sequence
          Length = 98413

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 205   tcaattattcactcattgcttca 227
             |||||||||||||||||||||||
Sbjct: 50256 tcaattattcactcattgcttca 50234

>gb|AC129020.4| Mus musculus BAC clone RP23-234A5 from chromosome 16, complete sequence
          Length = 192668

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 208   attattcactcattgcttcatttcc 232
             ||||||||| |||||||||||||||
Sbjct: 42150 attattcacacattgcttcatttcc 42126

>gb|AC120736.4| Rattus norvegicus 11 BAC CH230-252B13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 82009

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     ttgaaaccacattacattttg 24
             |||||||||||||||||||||
Sbjct: 20497 ttgaaaccacattacattttg 20517

>gb|AC156018.2| Mus musculus BAC clone RP24-160I18 from chromosome 16, complete sequence
          Length = 162673

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 208    attattcactcattgcttcatttcc 232
              ||||||||| |||||||||||||||
Sbjct: 159971 attattcacacattgcttcatttcc 159947

>gb|AC127566.3| Mus musculus BAC clone RP24-187F3 from chromosome 5, complete sequence
          Length = 176559

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    aatcatttttcttcttccaa 69
             ||||||||||||||||||||
Sbjct: 64095 aatcatttttcttcttccaa 64114

>gb|AC135230.8| Medicago truncatula clone mth2-23e14, complete sequence
          Length = 124972

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    tttttcttcttccaaacgac 74
             ||||||||||||||||||||
Sbjct: 13904 tttttcttcttccaaacgac 13885

>gb|AC137829.23| Medicago truncatula clone mth2-34j5, complete sequence
          Length = 127295

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     tttttcttcttccaaacgac 74
              ||||||||||||||||||||
Sbjct: 112582 tttttcttcttccaaacgac 112601

>gb|AC115686.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1325D05,
              complete sequence
          Length = 169500

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 42     ttattgacaatcatttttcttctt 65
              |||||||||||||||| |||||||
Sbjct: 107958 ttattgacaatcatttctcttctt 107981

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 42      ttattgacaatcatttttcttctt 65
               |||||||||||||||| |||||||
Sbjct: 9080766 ttattgacaatcatttctcttctt 9080743

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 53       catttttcttcttccaaacgaccc 76
                |||||||||||| |||||||||||
Sbjct: 22517623 catttttcttctcccaaacgaccc 22517646

>gb|AC064833.6| Homo sapiens BAC clone RP11-549B23 from 2, complete sequence
          Length = 157638

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   caaacaataactaatgtaag 260
             ||||||||||||||||||||
Sbjct: 79923 caaacaataactaatgtaag 79942

>gb|AC025815.10|AC025815 Arabidopsis thaliana chromosome 1 BAC T8D8 genomic sequence, complete
             sequence
          Length = 55021

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    ttgacaatcatttttcttct 64
             ||||||||||||||||||||
Sbjct: 41647 ttgacaatcatttttcttct 41666

>gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0027A14, from chromosome 10, complete sequence
          Length = 175667

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 42     ttattgacaatcatttttcttctt 65
              |||||||||||||||| |||||||
Sbjct: 168989 ttattgacaatcatttctcttctt 168966

>dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1331F11
          Length = 132205

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    catttttcttcttccaaacgaccc 76
             |||||||||||| |||||||||||
Sbjct: 32824 catttttcttctcccaaacgaccc 32847

>emb|AL929543.7| Zebrafish DNA sequence from clone CH211-166M10 in linkage group 17,
             complete sequence
          Length = 147094

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   cacttgtcctgactacataa 140
             ||||||||||||||||||||
Sbjct: 99751 cacttgtcctgactacataa 99732

>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00
          Length = 1457619

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     tcatttttcttcttccaaac 71
              ||||||||||||||||||||
Sbjct: 832614 tcatttttcttcttccaaac 832633

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 42      ttattgacaatcatttttcttctt 65
               |||||||||||||||| |||||||
Sbjct: 9085905 ttattgacaatcatttctcttctt 9085882

>gb|AC127581.4| Mus musculus BAC clone RP24-88B13 from 9, complete sequence
          Length = 204684

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    tggcacacatgcacgcatgc 176
              ||||||||||||||||||||
Sbjct: 179604 tggcacacatgcacgcatgc 179623


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,798,916
Number of Sequences: 3902068
Number of extensions: 2798916
Number of successful extensions: 75372
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75304
Number of HSP's gapped (non-prelim): 68
length of query: 284
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 262
effective length of database: 17,147,199,772
effective search space: 4492566340264
effective search space used: 4492566340264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)