>TPM4_DROME (P49455) Tropomyosin 1, isoforms 33/34 (Tropomyosin II)|
          Length = 518

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -3

Query: 409 EGTKEGAKDGAPAPANGAKQPAESKEVPANG 317
           EG    A +GA  PA GA  PAE    PA+G
Sbjct: 409 EGEAAPAAEGAAPPAEGAAPPAEGAVPPADG 439

>COMP_RAT (P35444) Cartilage oligomeric matrix protein precursor (COMP)|
          Length = 755

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -2

Query: 365 KWSQA--TCREQRSTRQRPRHRDGEGAACXXXXXXSRV 258
           KW  A   CR Q++  Q+   RDG+G AC       R+
Sbjct: 341 KWGDACDNCRSQKNDDQKDTDRDGQGDACDDDIDGDRI 378

>COMP_BOVIN (P35445) Cartilage oligomeric matrix protein (COMP) (Fragment)|
          Length = 439

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = -2

Query: 377 TSPSKWSQA--TCREQRSTRQRPRHRDGEGAACXXXXXXSRV 258
           T   KW  A   CR Q++  Q+   +DG G AC       R+
Sbjct: 21  TDGDKWGDACDNCRSQKNDDQKDTDKDGRGDACDDDIDGDRI 62

>COMP_HUMAN (P49747) Cartilage oligomeric matrix protein precursor (COMP)|
          Length = 757

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = -2

Query: 377 TSPSKWSQA--TCREQRSTRQRPRHRDGEGAACXXXXXXSRV 258
           T   KW  A   CR Q++  Q+   +DG G AC       R+
Sbjct: 339 TDEDKWGDACDNCRSQKNDDQKDTDQDGRGDACDDDIDGDRI 380

>VPS64_YEAST (Q03944) Vacuolar protein sorting protein 64 (Factor arrest protein|
           9)
          Length = 604

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 414 LKKAPRRVPKTAHQPQQMEPSNLQRAKKYPPTAPP 310
           L+K  R  P+  H P   + SN Q   K P T+PP
Sbjct: 4   LEKRRRPPPQLQHSPYVRDQSNSQGMTKTPETSPP 38

>CASR_BOVIN (P35384) Extracellular calcium-sensing receptor precursor (CaSR)|
            (Parathyroid Cell calcium-sensing receptor)
          Length = 1085

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -1

Query: 402  PRRVPKTAHQPQQM--EPSNLQRAKKYPPTAPPP 307
            P++ PK   QPQ +   P N Q+ +  PP+ P P
Sbjct: 926  PQQQPKRQKQPQPLALSPHNAQQPQPRPPSTPQP 959

>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)|
          Length = 426

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = -1

Query: 408 KAPRRVPKTAHQPQQMEPSNLQRAKKYPPTAPPP 307
           KAP   P  A QP   +P    RAKK P   PPP
Sbjct: 205 KAPS--PSPATQPPTKQPPPPPRAKKSPLLPPPP 236


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,523,708
Number of Sequences: 219361
Number of extensions: 856928
Number of successful extensions: 3792
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3783
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)