ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast65d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474364.1| Oryza sativa (japonica cultivar-group), predic... 92 2e-15
2emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4,... 92 2e-15
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
4dbj|AK103034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
5emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 92 2e-15
6gb|AY111854.1| Zea mays CL20029_1 mRNA sequence 70 6e-09
7gb|BT018962.1| Zea mays clone Contig296.F mRNA sequence 62 2e-06
8gb|AC105908.5| Homo sapiens chromosome 11, clone RP11-636L13, co... 42 1.4
9gb|AC090599.4| Homo sapiens chromosome 11, clone RP11-674E24, co... 42 1.4
10ref|NM_153470.1| Rattus norvegicus leucine zipper, putative tumo... 40 5.5
11gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
12gb|AC137694.5| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
13gb|AC183598.2| Pan troglodytes BAC clone CH251-455P14 from chrom... 40 5.5
14gb|BC031585.1| Homo sapiens hypothetical protein MGC35338, mRNA ... 40 5.5
15ref|NM_015393.2| Homo sapiens DKFZP564O0823 protein (DKFZP564O08... 40 5.5
16gb|AC005011.2| Homo sapiens BAC clone GS1-111G14 from 7, complet... 40 5.5
17gb|AC104434.2| Homo sapiens chromosome 3 clone RP11-625B23, comp... 40 5.5
18gb|AC124419.4| Mus musculus BAC clone RP24-319P11 from chromosom... 40 5.5
19emb|Z95116.1|HS57G9 Human DNA sequence from clone CTA-57G9 on ch... 40 5.5
20emb|AL133327.10| Human DNA sequence from clone RP11-77F13 on chr... 40 5.5
21gb|AC027451.11| Homo sapiens chromosome 8, clone RP11-696P8, com... 40 5.5
22emb|CR619393.1| full-length cDNA clone CS0DI011YN02 of Placenta ... 40 5.5
23dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.5
24gb|AC110760.3| Homo sapiens BAC clone RP11-44F21 from 4, complet... 40 5.5
25gb|AC104184.2| Homo sapiens chromosome 3 clone RP11-188P20, comp... 40 5.5
26gb|AC154847.2| Mus musculus BAC clone RP23-38J13 from chromosome... 40 5.5
27gb|AC154624.2| Mus musculus BAC clone RP23-330P24 from chromosom... 40 5.5
28gb|AC023245.5|AC023245 Homo sapiens chromosome 8, clone RP11-25D... 40 5.5
29gb|AC053513.4|AC053513 Homo sapiens BAC clone RP11-359J14 from 1... 40 5.5
30dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
31gb|AC097468.3| Homo sapiens BAC clone RP11-33O4 from 2, complete... 40 5.5
32emb|BX248319.5| Zebrafish DNA sequence from clone CH211-218O3 in... 40 5.5
33dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 5.5
34dbj|AP000417.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 5.5
35dbj|AK026200.1| Homo sapiens cDNA: FLJ22547 fis, clone HSI00356 40 5.5
36dbj|AK025205.1| Homo sapiens cDNA: FLJ21552 fis, clone COL06322 40 5.5
37gb|AY898611.1| Brachionus calyciflorus r22 (r2) gene, partial cds 40 5.5
38emb|AL954868.6| Zebrafish DNA sequence from clone CH211-254N4 in... 40 5.5
39emb|BX001003.6| Zebrafish DNA sequence from clone CH211-215E7, c... 40 5.5
40dbj|AB075607.1| Rattus norvegicus mRNA for PSD-Zip70, complete cds 40 5.5
41gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
42emb|AL929141.7| Zebrafish DNA sequence from clone CH211-149P5 in... 40 5.5
43ref|NM_152389.2| Homo sapiens hypothetical protein DKFZp434O0527... 40 5.5
44emb|AL772149.4| Mouse DNA sequence from clone RP23-108H7 on chro... 40 5.5
45dbj|AP001179.4| Homo sapiens genomic DNA, chromosome 11q14, clon... 40 5.5 
>ref|XM_474364.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 906

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                       
Query: 333 tctttgctctctgcaggttgcttggctccatttgctggggctggtgcgccgtctttggca 392
           ||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||| |||
Sbjct: 845 tctttgctctctgcaggcttcttggttccatttgctggggctggtgtgccgtctttagca 786

                                 
Query: 393 ccctccttggtgccttctttag 414
           || ||||| | ||| |||||||
Sbjct: 785 ccatcctttgcgccgtctttag 764
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>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01,
             complete sequence
          Length = 133331

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                         
Query: 333   tctttgctctctgcaggttgcttggctccatttgctggggctggtgcgccgtctttggca 392
             ||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||| |||
Sbjct: 21604 tctttgctctctgcaggcttcttggttccatttgctggggctggtgtgccgtctttagca 21545

                                   
Query: 393   ccctccttggtgccttctttag 414
             || ||||| | ||| |||||||
Sbjct: 21544 ccatcctttgcgccgtctttag 21523



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 67/78 (85%), Gaps = 7/78 (8%)
 Strand = Plus / Minus

                                                                         
Query: 87    ttgctgtgatactaatctgaatgttc--agagctgatcgatacatagccatccttgacgc 144
             ||||||||||||||| ||||||||||  ||||||    ||||||||||||||| ||||||
Sbjct: 21830 ttgctgtgatactaagctgaatgttctgagagct----gatacatagccatcc-tgacgc 21776

                               
Query: 145   acatctctacaaaaagat 162
             | ||||| | ||||||||
Sbjct: 21775 aaatctccataaaaagat 21758
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                            
Query: 333      tctttgctctctgcaggttgcttggctccatttgctggggctggtgcgccgtctttggca 392
                ||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||| |||
Sbjct: 34716042 tctttgctctctgcaggcttcttggttccatttgctggggctggtgtgccgtctttagca 34715983

                                      
Query: 393      ccctccttggtgccttctttag 414
                || ||||| | ||| |||||||
Sbjct: 34715982 ccatcctttgcgccgtctttag 34715961



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 67/78 (85%), Gaps = 7/78 (8%)
 Strand = Plus / Minus

                                                                            
Query: 87       ttgctgtgatactaatctgaatgttc--agagctgatcgatacatagccatccttgacgc 144
                ||||||||||||||| ||||||||||  ||||||    ||||||||||||||| ||||||
Sbjct: 34716268 ttgctgtgatactaagctgaatgttctgagagct----gatacatagccatcc-tgacgc 34716214

                                  
Query: 145      acatctctacaaaaagat 162
                | ||||| | ||||||||
Sbjct: 34716213 aaatctccataaaaagat 34716196
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>dbj|AK103034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117D08, full
           insert sequence
          Length = 1340

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                       
Query: 333 tctttgctctctgcaggttgcttggctccatttgctggggctggtgcgccgtctttggca 392
           ||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||| |||
Sbjct: 941 tctttgctctctgcaggcttcttggttccatttgctggggctggtgtgccgtctttagca 882

                                 
Query: 393 ccctccttggtgccttctttag 414
           || ||||| | ||| |||||||
Sbjct: 881 ccatcctttgcgccgtctttag 860



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 67/78 (85%), Gaps = 7/78 (8%)
 Strand = Plus / Minus

                                                                        
Query: 87   ttgctgtgatactaatctgaatgttc--agagctgatcgatacatagccatccttgacgc 144
            ||||||||||||||| ||||||||||  ||||||    ||||||||||||||| ||||||
Sbjct: 1167 ttgctgtgatactaagctgaatgttctgagagct----gatacatagccatcc-tgacgc 1113

                              
Query: 145  acatctctacaaaaagat 162
            | ||||| | ||||||||
Sbjct: 1112 aaatctccataaaaagat 1095
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>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete
             sequence
          Length = 103264

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                         
Query: 333   tctttgctctctgcaggttgcttggctccatttgctggggctggtgcgccgtctttggca 392
             ||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||| |||
Sbjct: 59110 tctttgctctctgcaggcttcttggttccatttgctggggctggtgtgccgtctttagca 59051

                                   
Query: 393   ccctccttggtgccttctttag 414
             || ||||| | ||| |||||||
Sbjct: 59050 ccatcctttgcgccgtctttag 59029



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 67/78 (85%), Gaps = 7/78 (8%)
 Strand = Plus / Minus

                                                                         
Query: 87    ttgctgtgatactaatctgaatgttc--agagctgatcgatacatagccatccttgacgc 144
             ||||||||||||||| ||||||||||  ||||||    ||||||||||||||| ||||||
Sbjct: 59336 ttgctgtgatactaagctgaatgttctgagagct----gatacatagccatcc-tgacgc 59282

                               
Query: 145   acatctctacaaaaagat 162
             | ||||| | ||||||||
Sbjct: 59281 aaatctccataaaaagat 59264
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>gb|AY111854.1| Zea mays CL20029_1 mRNA sequence
          Length = 772

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                       
Query: 332 ttctttgctctctgcaggttgcttggctccatttgctggggctggtgcgccgtctttggc 391
           ||||| |||||||||||| ||||||||  | |||||||||||||  ||||||||||||||
Sbjct: 369 ttcttggctctctgcaggctgcttggcgtcgtttgctggggctgccgcgccgtctttggc 428

              
Query: 392 acc 394
           |||
Sbjct: 429 acc 431
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>gb|BT018962.1| Zea mays clone Contig296.F mRNA sequence
          Length = 912

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 332 ttctttgctctctgcaggttgcttggctccatttgctggggctggtgcgccgtctttggc 391
           ||||| || ||||||||| ||||||||  | |||||||||||||  ||||||||||||||
Sbjct: 506 ttcttggccctctgcaggctgcttggcgtcgtttgctggggctgccgcgccgtctttggc 447

              
Query: 392 acc 394
           |||
Sbjct: 446 acc 444
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>gb|AC105908.5| Homo sapiens chromosome 11, clone RP11-636L13, complete sequence
          Length = 176485

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 189    tatttttgaaaataaaagttt 209
              |||||||||||||||||||||
Sbjct: 170070 tatttttgaaaataaaagttt 170050
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>gb|AC090599.4| Homo sapiens chromosome 11, clone RP11-674E24, complete sequence
          Length = 165287

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 189    tatttttgaaaataaaagttt 209
              |||||||||||||||||||||
Sbjct: 147340 tatttttgaaaataaaagttt 147360
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>ref|NM_153470.1| Rattus norvegicus leucine zipper, putative tumor suppressor 1
            (Lzts1), mRNA
          Length = 5008

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   cagccacagtctggaaccag 60
            ||||||||||||||||||||
Sbjct: 4443 cagccacagtctggaaccag 4424
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>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0002A19,
              complete sequence
          Length = 139052

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     ttgtttgctgtgatactaat 102
              ||||||||||||||||||||
Sbjct: 130591 ttgtttgctgtgatactaat 130572
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>gb|AC137694.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0002B02, complete sequence
          Length = 148881

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    ttgtttgctgtgatactaat 102
             ||||||||||||||||||||
Sbjct: 29070 ttgtttgctgtgatactaat 29051
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>gb|AC183598.2| Pan troglodytes BAC clone CH251-455P14 from chromosome 7, complete
              sequence
          Length = 216847

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    atttttgaaaataaaagttt 209
              ||||||||||||||||||||
Sbjct: 111573 atttttgaaaataaaagttt 111592
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>gb|BC031585.1| Homo sapiens hypothetical protein MGC35338, mRNA (cDNA clone
           MGC:35338 IMAGE:5180383), complete cds
          Length = 2292

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 24  accataatgtattcatccag 43
           ||||||||||||||||||||
Sbjct: 678 accataatgtattcatccag 697
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>ref|NM_015393.2| Homo sapiens DKFZP564O0823 protein (DKFZP564O0823), mRNA
          Length = 5044

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   ttgtttgctgtgatactaat 102
            ||||||||||||||||||||
Sbjct: 4327 ttgtttgctgtgatactaat 4346
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>gb|AC005011.2| Homo sapiens BAC clone GS1-111G14 from 7, complete sequence
          Length = 166069

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    atttttgaaaataaaagttt 209
              ||||||||||||||||||||
Sbjct: 134876 atttttgaaaataaaagttt 134895
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>gb|AC104434.2| Homo sapiens chromosome 3 clone RP11-625B23, complete sequence
          Length = 192758

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   atttttgaaaataaaagttt 209
             ||||||||||||||||||||
Sbjct: 11221 atttttgaaaataaaagttt 11240
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>gb|AC124419.4| Mus musculus BAC clone RP24-319P11 from chromosome 18, complete
             sequence
          Length = 140103

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   aggtatttttgaaaataaaa 205
             ||||||||||||||||||||
Sbjct: 65696 aggtatttttgaaaataaaa 65677
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>emb|Z95116.1|HS57G9 Human DNA sequence from clone CTA-57G9 on chromosome 22q12.1, complete
             sequence
          Length = 113872

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   ggttgcttggctccatttgc 367
             ||||||||||||||||||||
Sbjct: 83660 ggttgcttggctccatttgc 83679
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>emb|AL133327.10| Human DNA sequence from clone RP11-77F13 on chromosome 10 Contains the
             3' end of the PAPSS2 gene for 3'-phosphoadenosine
             5'-phosphosulfate synthase 2, the 3' end of a novel gene
             (FLJ90742) and a CpG island, complete sequence
          Length = 124628

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   ttggcaccctccttggtgcc 406
             ||||||||||||||||||||
Sbjct: 37917 ttggcaccctccttggtgcc 37898
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>gb|AC027451.11| Homo sapiens chromosome 8, clone RP11-696P8, complete sequence
          Length = 168958

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 190   atttttgaaaataaaagtttcaat 213
             |||||||||||||||| |||||||
Sbjct: 96048 atttttgaaaataaaaatttcaat 96025
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>emb|CR619393.1| full-length cDNA clone CS0DI011YN02 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1623

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   ttgtttgctgtgatactaat 102
            ||||||||||||||||||||
Sbjct: 1237 ttgtttgctgtgatactaat 1256
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 303     gtctcggtggcggggccgttggcg 326
               |||||||||||| |||||||||||
Sbjct: 4915404 gtctcggtggcgtggccgttggcg 4915381
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>gb|AC110760.3| Homo sapiens BAC clone RP11-44F21 from 4, complete sequence
          Length = 171632

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    ttgtttgctgtgatactaat 102
             ||||||||||||||||||||
Sbjct: 95702 ttgtttgctgtgatactaat 95721
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>gb|AC104184.2| Homo sapiens chromosome 3 clone RP11-188P20, complete sequence
          Length = 143034

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   atttttgaaaataaaagttt 209
             ||||||||||||||||||||
Sbjct: 24002 atttttgaaaataaaagttt 23983
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>gb|AC154847.2| Mus musculus BAC clone RP23-38J13 from chromosome 13, complete sequence
          Length = 200027

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    gtctggaaccaggagaaaac 68
             ||||||||||||||||||||
Sbjct: 53580 gtctggaaccaggagaaaac 53599
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>gb|AC154624.2| Mus musculus BAC clone RP23-330P24 from chromosome 13, complete
             sequence
          Length = 185935

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    gtctggaaccaggagaaaac 68
             ||||||||||||||||||||
Sbjct: 35939 gtctggaaccaggagaaaac 35920
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>gb|AC023245.5|AC023245 Homo sapiens chromosome 8, clone RP11-25D10, complete sequence
          Length = 175205

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 190  atttttgaaaataaaagtttcaat 213
            |||||||||||||||| |||||||
Sbjct: 6863 atttttgaaaataaaaatttcaat 6840
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>gb|AC053513.4|AC053513 Homo sapiens BAC clone RP11-359J14 from 12, complete sequence
          Length = 155958

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    catctctacaaaaagattgc 165
              ||||||||||||||||||||
Sbjct: 147115 catctctacaaaaagattgc 147134
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       ttgtttgctgtgatactaat 102
                ||||||||||||||||||||
Sbjct: 17971617 ttgtttgctgtgatactaat 17971598
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>gb|AC097468.3| Homo sapiens BAC clone RP11-33O4 from 2, complete sequence
          Length = 169741

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     accataatgtattcatccag 43
              ||||||||||||||||||||
Sbjct: 114911 accataatgtattcatccag 114892
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>emb|BX248319.5| Zebrafish DNA sequence from clone CH211-218O3 in linkage group 8,
             complete sequence
          Length = 193173

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   tacttctttgctctctgcag 348
             ||||||||||||||||||||
Sbjct: 28854 tacttctttgctctctgcag 28835
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 296     cttctccgtctcggtggcgg 315
               ||||||||||||||||||||
Sbjct: 3028525 cttctccgtctcggtggcgg 3028544
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>dbj|AP000417.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MMB12
          Length = 73977

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   tttttgaaaataaaagtttc 210
             ||||||||||||||||||||
Sbjct: 17197 tttttgaaaataaaagtttc 17216
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>dbj|AK026200.1| Homo sapiens cDNA: FLJ22547 fis, clone HSI00356
          Length = 1343

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  ttgtttgctgtgatactaat 102
           ||||||||||||||||||||
Sbjct: 590 ttgtttgctgtgatactaat 609
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>dbj|AK025205.1| Homo sapiens cDNA: FLJ21552 fis, clone COL06322
          Length = 2045

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   ttgtttgctgtgatactaat 102
            ||||||||||||||||||||
Sbjct: 1316 ttgtttgctgtgatactaat 1335
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>gb|AY898611.1| Brachionus calyciflorus r22 (r2) gene, partial cds
          Length = 388

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 183 tccaggtatttttgaaaata 202
           ||||||||||||||||||||
Sbjct: 379 tccaggtatttttgaaaata 360
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>emb|AL954868.6| Zebrafish DNA sequence from clone CH211-254N4 in linkage group 8,
             complete sequence
          Length = 194224

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   tacttctttgctctctgcag 348
             ||||||||||||||||||||
Sbjct: 65704 tacttctttgctctctgcag 65723
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>emb|BX001003.6| Zebrafish DNA sequence from clone CH211-215E7, complete sequence
          Length = 212403

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 186    aggtatttttgaaaataaaagttt 209
              ||||||||||||||||| ||||||
Sbjct: 143445 aggtatttttgaaaatacaagttt 143422
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>dbj|AB075607.1| Rattus norvegicus mRNA for PSD-Zip70, complete cds
          Length = 5008

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   cagccacagtctggaaccag 60
            ||||||||||||||||||||
Sbjct: 4443 cagccacagtctggaaccag 4424
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       ttgtttgctgtgatactaat 102
                ||||||||||||||||||||
Sbjct: 18062379 ttgtttgctgtgatactaat 18062360
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>emb|AL929141.7| Zebrafish DNA sequence from clone CH211-149P5 in linkage group 18,
              complete sequence
          Length = 182116

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 186    aggtatttttgaaaataaaagttt 209
              ||||||||||||||||| ||||||
Sbjct: 131556 aggtatttttgaaaatacaagttt 131579
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>ref|NM_152389.2| Homo sapiens hypothetical protein DKFZp434O0527 (DKFZp434O0527),
           transcript variant 2, mRNA
          Length = 2290

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 24  accataatgtattcatccag 43
           ||||||||||||||||||||
Sbjct: 678 accataatgtattcatccag 697
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>emb|AL772149.4| Mouse DNA sequence from clone RP23-108H7 on chromosome 2, complete
              sequence
          Length = 196676

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    tatttttgaaaataaaagtt 208
              ||||||||||||||||||||
Sbjct: 151116 tatttttgaaaataaaagtt 151135
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>dbj|AP001179.4| Homo sapiens genomic DNA, chromosome 11q14, clone:RP11-816L8, complete
             sequence
          Length = 221198

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 233   tggtgtttctgtaaggagaagcta 256
             |||||||||||||| |||||||||
Sbjct: 99223 tggtgtttctgtaatgagaagcta 99246


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,078,282
Number of Sequences: 3902068
Number of extensions: 4078282
Number of successful extensions: 140189
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139918
Number of HSP's gapped (non-prelim): 267
length of query: 414
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 392
effective length of database: 17,147,199,772
effective search space: 6721702310624
effective search space used: 6721702310624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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