>POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocapsid protein C;|
           Membrane glycoprotein E2; Membrane glycoprotein E1]
          Length = 1063

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = -1

Query: 329 PRARQAGRGRLPGGRRDWPRAP 264
           PR R+  RGR  G RRDW RAP
Sbjct: 59  PRRRRGNRGR--GQRRDWSRAP 78

>POLS_RUBVH (P21480) Structural polyprotein [Contains: Nucleocapsid protein C;|
           Membrane glycoprotein E2; Membrane glycoprotein E1]
          Length = 1063

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -1

Query: 329 PRARQAGRGRLPGGRRDWPRAP 264
           PR R+  RGR  G R+DW RAP
Sbjct: 59  PRRRRGNRGR--GQRKDWSRAP 78

>VE2_BPV3 (Q8BDD6) Regulatory protein E2|
          Length = 414

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 338 PSVPRARQAGRGRLPGGRRDWPRAPEI 258
           PS  R+R   R R P G    PRAP +
Sbjct: 246 PSSSRSRSRSRSRSPSGSHSRPRAPHV 272

>POLS_RUBVR (P19725) Structural polyprotein [Contains: Nucleocapsid protein C;|
           Membrane glycoprotein E2; Membrane glycoprotein E1]
          Length = 1063

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -1

Query: 329 PRARQAGRGRLPGGRRDWPRAP 264
           PR  +  RGR  G RRDW RAP
Sbjct: 59  PRRPRGNRGR--GQRRDWSRAP 78

>NEST_HUMAN (P48681) Nestin|
          Length = 1618

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 328  QEQGKQGEEDCQEGGEIGPG 269
            +E G++GEED +EG E G G
Sbjct: 1413 EESGEEGEEDQEEGREPGAG 1432

>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3|
           (EC 2.7.11.1)
          Length = 1309

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 16/27 (59%), Positives = 16/27 (59%)
 Frame = -1

Query: 341 RPSVPRARQAGRGRLPGGRRDWPRAPE 261
           R S PR   AGRGR  GG RD   APE
Sbjct: 851 RHSTPRPLDAGRGRRLGGPRD--PAPE 875


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,889,677
Number of Sequences: 219361
Number of extensions: 481362
Number of successful extensions: 1235
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1233
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)