| Clone Name | rbast65b09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PGSB2_DROME (Q9VV96) Peptidoglycan-recognition protein-SB2 precu... | 30 | 2.1 | 2 | PGSB2_DROSI (Q70PW6) Peptidoglycan-recognition protein-SB2 precu... | 28 | 6.2 |
|---|
>PGSB2_DROME (Q9VV96) Peptidoglycan-recognition protein-SB2 precursor (EC| 3.5.1.28) Length = 182 Score = 29.6 bits (65), Expect = 2.1 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -2 Query: 135 SSWCKRPLIPRMPPLQRPCR 76 SSWC P+ PRMP L P R Sbjct: 23 SSWCPVPISPRMPRLMVPVR 42
>PGSB2_DROSI (Q70PW6) Peptidoglycan-recognition protein-SB2 precursor (EC| 3.5.1.28) Length = 182 Score = 28.1 bits (61), Expect = 6.2 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -2 Query: 135 SSWCKRPLIPRMPPLQRPCR 76 SSWC P+ PR+P L P R Sbjct: 23 SSWCPVPISPRIPRLMVPVR 42 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,230,480 Number of Sequences: 219361 Number of extensions: 540459 Number of successful extensions: 1610 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1560 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1610 length of database: 80,573,946 effective HSP length: 61 effective length of database: 67,192,925 effective search space used: 1612630200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)