>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 21/79 (26%), Positives = 24/79 (30%), Gaps = 3/79 (3%)
 Frame = +2

Query: 158 PPTNHLFLGTWAQGHQGRNTILFCPLQPHHLPS*KHW*---HQHFCLCRFLPSLHHHQTL 328
           PP +H  LG     H   +         HH  +  H     H H       P  HHH   
Sbjct: 108 PPHHHHHLGHHHHHHHAAHHHHHEEHHHHHHAAHHHHHEEHHHHHHAAHHHPWFHHHHLG 167

Query: 329 LSEAEPPQHHHRQLHLNMH 385
                 P HHH   H   H
Sbjct: 168 YHHHHAPHHHHHHHHAPHH 186



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/50 (32%), Positives = 19/50 (38%)
 Frame = +2

Query: 236 QPHHLPS*KHW*HQHFCLCRFLPSLHHHQTLLSEAEPPQHHHRQLHLNMH 385
           + HH P  +   H H       P  HHH        PP HHH   H + H
Sbjct: 83  EEHHEPHHEEHHHHH-------PHPHHHH----HHHPPHHHHHLGHHHHH 121

>ERR2_HUMAN (O95718) Steroid hormone receptor ERR2 (Estrogen-related receptor,|
           beta) (ERR-beta) (Estrogen receptor-like 2) (ERR beta-2)
          Length = 500

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = -3

Query: 223 ENSISSLMSLCPCTQKQVVC---WREDVPGFECFFFGDSVS 110
           E  I +L +LC    +++V    W + +PGF     GD +S
Sbjct: 234 EGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGDQMS 274

>UL88_HCMVA (P16731) Protein UL88|
          Length = 429

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2

Query: 284 CLCRFLPSLHHHQTLLSEAEPP 349
           CLC  L SLH HQ  L   +PP
Sbjct: 333 CLCLLLNSLHLHQEALEALDPP 354

>WC1_NEUCR (Q01371) White collar 1 protein (WC1)|
          Length = 1167

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = +1

Query: 100  EHQRRPNHQKKNTRNREH---PPSNKPLVSGYMGTRTSG 207
            + Q +  HQ+++ + ++H   PP ++PL+ G  G R SG
Sbjct: 1110 QQQHQQQHQQQHQQLQQHQFNPPQSQPLLEGGSGFRGSG 1148

>VWF_BOVIN (P80012) Von Willebrand factor precursor (vWF) (Fragment)|
          Length = 937

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -3

Query: 217 SISSLMSLCPCTQKQVVCWREDVPGFECFFFGDS 116
           S+S   + C C   Q VC  ED PG EC   G S
Sbjct: 361 SLSRDCNTCICRNSQWVCSNEDCPG-ECLITGQS 393

>M3K13_HUMAN (O43283) Mitogen-activated protein kinase kinase kinase 13 (EC|
           2.7.11.25) (Mixed lineage kinase) (MLK) (Leucine
           zipper-bearing kinase)
          Length = 966

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
 Frame = +2

Query: 302 PSLHHHQTLLSEAEPP-----QHHHRQLHLNMH 385
           PSLHHH +L  + + P     Q HH +  LNMH
Sbjct: 629 PSLHHHNSLQQQYQQPPPAMSQSHHPR--LNMH 659

>ERR2_RAT (P11475) Steroid hormone receptor ERR2 (Estrogen-related receptor,|
           beta) (ERR-beta) (Estrogen receptor-like 2)
          Length = 433

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = -3

Query: 223 ENSISSLMSLCPCTQKQVV---CWREDVPGFECFFFGDSVS 110
           E  I +L +LC    +++V    W + +PGF     GD +S
Sbjct: 234 EGDIKALTTLCDLADRELVFLISWAKHIPGFSNLTLGDQMS 274

>ERR2_MOUSE (Q61539) Steroid hormone receptor ERR2 (Estrogen-related receptor,|
           beta) (ERR-beta) (Estrogen receptor-like 2)
          Length = 433

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = -3

Query: 223 ENSISSLMSLCPCTQKQVVC---WREDVPGFECFFFGDSVS 110
           E  I +L +LC    +++V    W + +PGF     GD +S
Sbjct: 234 EGDIKALTTLCELADRELVFLINWAKHIPGFPSLTLGDQMS 274

>KUP_GLUOX (Q5FQL0) Probable potassium transport system protein kup|
          Length = 675

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = -3

Query: 280 MLVLPVLSAWKMMRLKRTKENSISSLMSLCPCTQK-QVVCWREDVPGFE--CFFFGDSVS 110
           ML++ +     +MR     E  I +LMSL     K Q   W   + G    C FFGDS+ 
Sbjct: 113 MLIVTIKYVILIMRADHDGEGGIIALMSLAQRVCKSQHFRWLFGLVGIAGTCLFFGDSII 172

Query: 109 SDVLTLL 89
           +  +++L
Sbjct: 173 TPAISVL 179

>ZMPB_STRR6 (Q8DQN5) Zinc metalloprotease zmpB precursor (EC 3.4.24.-)|
          Length = 1876

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +3

Query: 54  SKNHTLLKQNLPNRVRTSEET--ESPKKKHSKPGTSSLQQTTCFWVHGHKDI 203
           ++ +  ++    N   T EET  ++P+ +  K GT  L++ T  W +  KD+
Sbjct: 480 TETYKTIRGEKTNEAPTVEETVLQAPQDEIIKKGTKGLEKPTLQWANTEKDV 531

>MCR_XENLA (Q91573) Mineralocorticoid receptor (MR) (Fragment)|
          Length = 612

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 229 TKENSISSLMSLCPCTQKQVVCWREDVPGFECFFFGDSVS 110
           T EN +SSL  L      QVV W + +PGF      D ++
Sbjct: 389 TAENLLSSLNQLAGKQMVQVVKWAKVIPGFRNLPLEDQIT 428

>TSGA2_HUMAN (Q8WYR4) Testis-specific gene A2 protein (Male meiotic metaphase|
           chromosome-associated acidic protein) (Meichroacidin)
          Length = 309

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -2

Query: 383 AYSGEAVDDDVEEAQPLTKGFDGDVGMVKIDKDRNV 276
           A   E+  +  EEAQ L +GF+G++ M   D+D +V
Sbjct: 238 APGAESAGEPGEEAQALLEGFEGEMDMRPGDEDADV 273

>UL47_EHV1V (Q6S6Q8) 97 kDa alpha trans-inducing protein (Tegument protein)|
           (GP10)
          Length = 871

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 99  RTSEETESPKKKHSKPGTSSLQQTTCFW 182
           R  +E  S + + S P TS+ QQ+T FW
Sbjct: 55  RDPQEQASNQDESSNPSTSNAQQSTSFW 82

>UL47_EHV1B (P28929) 97 kDa alpha trans-inducing protein (Tegument protein)|
           (GP10)
          Length = 871

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 99  RTSEETESPKKKHSKPGTSSLQQTTCFW 182
           R  +E  S + + S P TS+ QQ+T FW
Sbjct: 55  RDPQEQASNQDESSNPSTSNAQQSTSFW 82

>ASPG_LUPLU (Q9ZSD6) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine|
           amidohydrolase) [Contains: L-asparaginase alpha subunit;
           L-asparaginase beta subunit]
          Length = 325

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -2

Query: 371 EAVDDDVEEAQPLTKGFD--GDVGMVKIDKDRNVGATSA 261
           E V DD E+  PLT G    G VG V +D   N+ + ++
Sbjct: 172 EPVKDDAEKELPLTNGDSQIGTVGCVAVDSHGNLASATS 210

>HRP3_PLAFS (P14586) Histidine-rich protein|
          Length = 82

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = +2

Query: 263 HW*HQHFCLCRFLPSLHHHQTLLSEAEPPQHHHRQ--LHLNMH 385
           H+ H+H  L   L   HHH          +HHHR   LH N H
Sbjct: 8   HYFHRHHHLNHHLYHRHHHH----RHHHHRHHHRHQILHQNRH 46

>LPXB_CHLMU (Q9PJY4) Lipid-A-disaccharide synthase (EC 2.4.1.182)|
          Length = 607

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +1

Query: 127 KKNTRNREHPPSNKPLVSGYMGTRTS 204
           K+N + R H P++KP V+ + G+R S
Sbjct: 399 KQNWKERLHLPTDKPFVAAFPGSRHS 424

>YYAL_BACSU (P37512) Hypothetical protein yyaL|
          Length = 689

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 12/69 (17%)
 Frame = +3

Query: 42  LPRCSKNHTLLKQNLPNRVRTS----------EETESPKKKHSKPGTSSLQQTTCFWVH- 188
           +P  SK + L+ +  P  ++ +          EE     K+ +KP   S+  +TC W H 
Sbjct: 1   MPNKSKPNRLINEKSPYLLQHAHNPVDWFPWGEEAFEKAKRENKPVLVSIGYSTCHWCHV 60

Query: 189 -GHKDIREE 212
             H+   +E
Sbjct: 61  MAHESFEDE 69

>S12A6_HUMAN (Q9UHW9) Solute carrier family 12 member 6 (Electroneutral|
           potassium-chloride cotransporter 3) (K-Cl cotransporter
           3)
          Length = 1150

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +3

Query: 6   VKHRSTPTRVITLPRCSKNHTLLKQNLPNRVRTSEETESPKKKHSKPGTSSLQQTT 173
           V+   TPT++  +P  S     L     +RVR S     P+   S+P +     TT
Sbjct: 13  VRFMVTPTKIDDIPGLSDTSPDLSSRSSSRVRFSSRESVPETSRSEPMSEMSGATT 68

>L100_ADEP3 (Q9YTR7) Late 100 kDa protein|
          Length = 838

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 302 PSLHHHQTLLSEAEPPQHHHRQ 367
           PS  HH     EA P QH H+Q
Sbjct: 704 PSTAHHAAPPEEAHPQQHQHQQ 725

>HMIN_DROME (P05527) Homeobox protein invected|
          Length = 576

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 314 HHQTLLSEAEPPQHHHRQLHLN 379
           H Q LL   +   HHH Q HLN
Sbjct: 246 HQQLLLQRDQVHHHHHMQNHLN 267

>GPV_MOUSE (O08742) Platelet glycoprotein V precursor (GPV) (CD42D antigen)|
          Length = 567

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2

Query: 287 LCRFLPSLHHHQTLLSEAEPPQ 352
           L RFL  L HH  +L   EPPQ
Sbjct: 429 LWRFLQWLRHHPDILGRDEPPQ 450

>GP173_BRARE (Q9I918) Probable G-protein coupled receptor 173 (Super conserved|
           receptor expressed in brain 3)
          Length = 387

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -1

Query: 159 GRMFPVSSVFFLVIRSPLMFLPY*AGFVLEAC 64
           GRMF V ++FFLV+ SP +   Y   FV +AC
Sbjct: 299 GRMFYVITLFFLVLWSPYIVACYWRVFV-KAC 329

>Y219_MYCGE (P47461) Hypothetical protein MG219|
          Length = 148

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 45  PRCSKNHTLLKQNLPNRVRTSEETESPKKKHSKPGTSSLQQT 170
           P+ +K  T +K        TS+ T+  K K SKP +  +QQT
Sbjct: 94  PKATKKKTPVKSK-----PTSKSTKQTKPKQSKPKSKQVQQT 130

>IF2_RHILO (Q98BI8) Translation initiation factor IF-2|
          Length = 860

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 21  TPTRVITLPRCSKNHTLLKQNLPNRVRTSEETESPKKKHSKPG 149
           TP + +TL R       ++QN  +    S   E+ K+K S PG
Sbjct: 15  TPMKTLTLKRPGMEQGTVRQNFSHGRTKSVVVETKKRKFSLPG 57

>MCR_TUPGB (Q29131) Mineralocorticoid receptor (MR)|
          Length = 977

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -3

Query: 229 TKENSISSLMSLCPCTQKQVVCWREDVPGFECFFFGDSVSSDVLTLLGRFCFRS 68
           T EN +S+L  L      QVV W + +PGF+     D ++   L    R C  S
Sbjct: 754 TAENLLSTLNRLAGKQMIQVVKWAKVLPGFKNLPLEDQIT---LIQYSRMCLSS 804

>CLPB_BACTN (Q89YY3) Chaperone clpB|
          Length = 862

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 371 EAVDDDVEEAQPLTKGFDGDVGMVKIDKD 285
           +A+D ++E+ Q   +G  GD  M+K + D
Sbjct: 502 QALDKEIEDTQEKLRGMQGDKAMIKEEVD 530


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,170,287
Number of Sequences: 219361
Number of extensions: 1135470
Number of successful extensions: 3822
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3787
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)