ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast64a03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y946_ARCFU (O29316) Hypothetical protein AF0946 precursor 32 0.33
2EAD_EBV (P03191) Early antigen protein D (EA-D) 28 6.3
3TAB2_RAT (Q5U303) Mitogen-activated protein kinase kinase kinase... 28 6.3

>Y946_ARCFU (O29316) Hypothetical protein AF0946 precursor|
          Length = 1036

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 208  EPTDRLTPLWKEPDDVLATKTVVSLSDETTTETML 104
            +P   L P++K  DDVL  KT+  L    TT T++
Sbjct: 942  DPASELAPMYKADDDVLVIKTIELLETAPTTTTVV 976



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>EAD_EBV (P03191) Early antigen protein D (EA-D)|
          Length = 404

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -1

Query: 250 LTKQSSHAVMPLPSEPTDRLTPLWKEP-DDVLATKTVVSLSDETTTETMLCYQ 95
           L ++  H V P PS P    TP W+ P      +  + S S  T  E  L  Q
Sbjct: 324 LQQRPRHTVSPSPSPPPPPRTPTWESPARPETPSPAIPSHSSNTALERPLAVQ 376



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>TAB2_RAT (Q5U303) Mitogen-activated protein kinase kinase kinase|
           7-interacting protein 2
          Length = 693

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1

Query: 229 AVMPLPSEPTDRLTPLWKEPDDVLATKTVVSLSDET 122
           AV P    PT  LT L   PD  + T+T+  L+D T
Sbjct: 475 AVSPGVVSPTFELTNLLNHPDHYVETETIQHLTDPT 510


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,465,113
Number of Sequences: 219361
Number of extensions: 359668
Number of successful extensions: 968
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 80,573,946
effective HSP length: 58
effective length of database: 67,851,008
effective search space used: 1628424192
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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