>ref|XM_464681.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 813

 Score =  109 bits (55), Expect = 6e-21
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                       
Query: 238 accacttgtagcggcggtagatggcctcggcgtgcgcgttcttgtaggcgctgcaaccga 297
           ||||||||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||
Sbjct: 811 accacttgtagcggcggaagagggcctcggcctgggcgttcttgtaggcgctgcagccga 752

                                          
Query: 298 tgaggtagaggaagaggagcgagacggtggc 328
            |||||||||||||| ||| | |||||||||
Sbjct: 751 cgaggtagaggaagacgagggcgacggtggc 721

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  109 bits (55), Expect = 6e-21
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                           
Query: 238     accacttgtagcggcggtagatggcctcggcgtgcgcgttcttgtaggcgctgcaaccga 297
               ||||||||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||
Sbjct: 6678853 accacttgtagcggcggaagagggcctcggcctgggcgttcttgtaggcgctgcagccga 6678794

                                              
Query: 298     tgaggtagaggaagaggagcgagacggtggc 328
                |||||||||||||| ||| | |||||||||
Sbjct: 6678793 cgaggtagaggaagacgagggcgacggtggc 6678763

>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0027A02
          Length = 140402

 Score =  109 bits (55), Expect = 6e-21
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                          
Query: 238    accacttgtagcggcggtagatggcctcggcgtgcgcgttcttgtaggcgctgcaaccga 297
              ||||||||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||
Sbjct: 113228 accacttgtagcggcggaagagggcctcggcctgggcgttcttgtaggcgctgcagccga 113169

                                             
Query: 298    tgaggtagaggaagaggagcgagacggtggc 328
               |||||||||||||| ||| | |||||||||
Sbjct: 113168 cgaggtagaggaagacgagggcgacggtggc 113138

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                            
Query: 239      ccacttgtagcggcggtagatggcctcggcgtgcgcgttcttgtaggcgctgcaaccgat 298
                |||||||||||||||| ||| | ||||||  |||||||||||| |||||||||| |||||
Sbjct: 21849932 ccacttgtagcggcggaagaggtcctcggtctgcgcgttcttgaaggcgctgcagccgat 21849991

                                              
Query: 299      gaggtagaggaagaggagcgagacggtggc 328
                || ||||| ||||| ||||| |||||||||
Sbjct: 21849992 gacgtagaagaagatgagcgcgacggtggc 21850021

>dbj|AP005460.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0610D01
          Length = 146418

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                          
Query: 239    ccacttgtagcggcggtagatggcctcggcgtgcgcgttcttgtaggcgctgcaaccgat 298
              |||||||||||||||| ||| | ||||||  |||||||||||| |||||||||| |||||
Sbjct: 108013 ccacttgtagcggcggaagaggtcctcggtctgcgcgttcttgaaggcgctgcagccgat 108072

                                            
Query: 299    gaggtagaggaagaggagcgagacggtggc 328
              || ||||| ||||| ||||| |||||||||
Sbjct: 108073 gacgtagaagaagatgagcgcgacggtggc 108102

>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0006A22
          Length = 190690

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                         
Query: 239   ccacttgtagcggcggtagatggcctcggcgtgcgcgttcttgtaggcgctgcaaccgat 298
             |||||||||||||||| ||| | ||||||  |||||||||||| |||||||||| |||||
Sbjct: 72417 ccacttgtagcggcggaagaggtcctcggtctgcgcgttcttgaaggcgctgcagccgat 72476

                                           
Query: 299   gaggtagaggaagaggagcgagacggtggc 328
             || ||||| ||||| ||||| |||||||||
Sbjct: 72477 gacgtagaagaagatgagcgcgacggtggc 72506

>dbj|AK070273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046E08, full
           insert sequence
          Length = 1216

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 79/90 (87%)
 Strand = Plus / Minus

                                                                       
Query: 239 ccacttgtagcggcggtagatggcctcggcgtgcgcgttcttgtaggcgctgcaaccgat 298
           |||||||||||||||| ||| | ||||||  |||||||||||| |||||||||| |||||
Sbjct: 878 ccacttgtagcggcggaagaggtcctcggtctgcgcgttcttgaaggcgctgcagccgat 819

                                         
Query: 299 gaggtagaggaagaggagcgagacggtggc 328
           || ||||| ||||| ||||| |||||||||
Sbjct: 818 gacgtagaagaagatgagcgcgacggtggc 789

>emb|BX649507.3| Zebrafish DNA sequence from clone CH211-154H20 in linkage group 18,
              complete sequence
          Length = 166185

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 33     attactaaaacattgacatcaacacca 59
              |||||||||||||||||| ||||||||
Sbjct: 154149 attactaaaacattgacaacaacacca 154123

>gb|BC110092.1| Danio rerio zgc:123203, mRNA (cDNA clone MGC:123203 IMAGE:7292271),
            complete cds
          Length = 1215

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 33   attactaaaacattgacatcaacacca 59
            |||||||||||||||||| ||||||||
Sbjct: 1177 attactaaaacattgacaacaacacca 1151

>ref|NM_001037580.1| Danio rerio zgc:123203 (zgc:123203), mRNA
          Length = 1215

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 33   attactaaaacattgacatcaacacca 59
            |||||||||||||||||| ||||||||
Sbjct: 1177 attactaaaacattgacaacaacacca 1151

>gb|AC164170.7| Mus musculus 10 BAC RP24-419C12 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 158496

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 296   gatgaggtagaggaagaggag 316
             |||||||||||||||||||||
Sbjct: 87990 gatgaggtagaggaagaggag 88010

>emb|AL590416.4| Human DNA sequence from clone RP11-89C21 on chromosome 10p13-14
             Contains the 3' end of the gene for a protein related to
             the N terminus of tre (RNTRE) (KIAA0019), gene FLJ34168, a
             novel gene and a CpG island, complete sequence
          Length = 171026

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 152   aagctactaataataatactg 172
             |||||||||||||||||||||
Sbjct: 60404 aagctactaataataatactg 60424

>gb|AY158230.1| Mus musculus strain 129/SvJ chromosome 10 clone 10A1 unknown genomic
             sequence
          Length = 77891

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 296   gatgaggtagaggaagaggag 316
             |||||||||||||||||||||
Sbjct: 10612 gatgaggtagaggaagaggag 10632

>gb|AC026392.7| Homo sapiens chromosome 10 clone RP11-238C10, complete sequence
          Length = 177829

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 152    aagctactaataataatactg 172
              |||||||||||||||||||||
Sbjct: 143527 aagctactaataataatactg 143547

>gb|AC007367.3| Homo sapiens BAC clone RP11-518G12 from 2, complete sequence
          Length = 197278

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 297  atgaggtagaggaagaggagc 317
            |||||||||||||||||||||
Sbjct: 9833 atgaggtagaggaagaggagc 9853

>ref|NM_001006601.1| Canis familiaris amyloid beta (A4) precursor protein (peptidase
           nexin-II, Alzheimer disease) (APP), mRNA
          Length = 2362

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 cgatgaggtagaggaagagg 314
           ||||||||||||||||||||
Sbjct: 771 cgatgaggtagaggaagagg 790

>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete
             sequence
          Length = 145590

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   gatgaggtagaggaagagga 315
             ||||||||||||||||||||
Sbjct: 43570 gatgaggtagaggaagagga 43551

>gb|AY814900.1| Schistosoma japonicum SJCHGC02687 protein mRNA, complete cds
          Length = 1325

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 38  taaaacattgacatcaacaccaac 61
           ||||||||||||||||||| ||||
Sbjct: 732 taaaacattgacatcaacatcaac 709

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 296      gatgaggtagaggaagagga 315
                ||||||||||||||||||||
Sbjct: 22448323 gatgaggtagaggaagagga 22448304

>gb|AY498708.1| Canis familiaris beta amyloid precursor protein isoform APP751
           (beta APP) mRNA, complete cds; alternatively spliced
          Length = 2305

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 cgatgaggtagaggaagagg 314
           ||||||||||||||||||||
Sbjct: 771 cgatgaggtagaggaagagg 790

>gb|AY498707.1| Canis familiaris beta amyloid precursor protein isoform APP695
           (beta APP) mRNA, complete cds; alternatively spliced
          Length = 2137

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 cgatgaggtagaggaagagg 314
           ||||||||||||||||||||
Sbjct: 771 cgatgaggtagaggaagagg 790

>gb|AY498706.1| Canis familiaris beta amyloid precursor protein  isoform APP770
           (beta APP) mRNA, complete cds; alternatively spliced
          Length = 2362

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 cgatgaggtagaggaagagg 314
           ||||||||||||||||||||
Sbjct: 771 cgatgaggtagaggaagagg 790

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 296      gatgaggtagaggaagagga 315
                ||||||||||||||||||||
Sbjct: 22441352 gatgaggtagaggaagagga 22441333

>gb|AC016045.8|AC016045 Homo sapiens chromosome 15 clone RP11-96N2 map 15q21, complete sequence
          Length = 164868

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   aaaccaggaaacattcccta 131
             ||||||||||||||||||||
Sbjct: 40071 aaaccaggaaacattcccta 40052

>gb|AY926582.1| Canis familiaris beta-amyloid precursor protein 695 mRNA, complete
           cds
          Length = 2113

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 cgatgaggtagaggaagagg 314
           ||||||||||||||||||||
Sbjct: 762 cgatgaggtagaggaagagg 781

>gb|AY926581.1| Canis familiaris beta-amyloid precursor protein 714 mRNA, complete
           cds
          Length = 2170

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 cgatgaggtagaggaagagg 314
           ||||||||||||||||||||
Sbjct: 762 cgatgaggtagaggaagagg 781

>gb|AY926580.1| Canis familiaris beta-amyloid precursor protein 751 mRNA, complete
           cds
          Length = 2281

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 cgatgaggtagaggaagagg 314
           ||||||||||||||||||||
Sbjct: 762 cgatgaggtagaggaagagg 781

>gb|AY926579.1| Canis familiaris beta-amyloid precursor protein 770 mRNA, complete
           cds
          Length = 2338

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 cgatgaggtagaggaagagg 314
           ||||||||||||||||||||
Sbjct: 762 cgatgaggtagaggaagagg 781

>dbj|AP001032.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-874N19, complete
              sequence
          Length = 165113

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    accataaaccaggaaacatt 126
              ||||||||||||||||||||
Sbjct: 143108 accataaaccaggaaacatt 143089

>emb|AL606922.5| Mouse DNA sequence from clone RP23-149E24 on chromosome 4, complete
              sequence
          Length = 191957

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    taaaccaggaaacattccct 130
              ||||||||||||||||||||
Sbjct: 152915 taaaccaggaaacattccct 152934

>dbj|AP002340.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2011F17, complete
              sequence
          Length = 165747

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    gatgaggtagaggaagagga 315
              ||||||||||||||||||||
Sbjct: 132754 gatgaggtagaggaagagga 132735

>emb|AL844565.2| Mouse DNA sequence from clone RP23-427L11 on chromosome 2, complete
             sequence
          Length = 95786

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   gatgaggtagaggaagagga 315
             ||||||||||||||||||||
Sbjct: 60000 gatgaggtagaggaagagga 60019


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,916,443
Number of Sequences: 3902068
Number of extensions: 3916443
Number of successful extensions: 67768
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67612
Number of HSP's gapped (non-prelim): 156
length of query: 328
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 306
effective length of database: 17,147,199,772
effective search space: 5247043130232
effective search space used: 5247043130232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)