ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast62g11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 29 ttctgctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaat 88 |||| |||||||||||||||||||||| || | ||| ||||||| ||||| ||| ||||| Sbjct: 150279 ttctactccctctgtaaactaatataagagtgtttaaattactaaagtagtgttctaaat 150220 Query: 89 gctcttatattaatttacagagg 111 |||||||||||| ||||| |||| Sbjct: 150219 gctcttatattagtttacggagg 150197 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 tctgtaaactaatataaaaga 59 ||||||||||||||||||||| Sbjct: 152563 tctgtaaactaatataaaaga 152543
>gb|AY896050.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531853 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||||||||||||||| | ||||||||||| ||||| |||||||||| ||| Sbjct: 887 ctccatctgtaaactaatataaaagcgtttagattactaaagtagtgttttaaatgttct 946 Query: 94 tatatta 100 ||||||| Sbjct: 947 tatatta 953
>gb|AY896046.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420911 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||||||||||||||| | ||||||||||| ||||| |||||||||| ||| Sbjct: 887 ctccatctgtaaactaatataaaagcgtttagattactaaagtagtgttttaaatgttct 946 Query: 94 tatatta 100 ||||||| Sbjct: 947 tatatta 953
>gb|AY896045.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 406276 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||||||||||||||| | ||||||||||| ||||| |||||||||| ||| Sbjct: 887 ctccatctgtaaactaatataaaagcgtttagattactaaagtagtgttttaaatgttct 946 Query: 94 tatatta 100 ||||||| Sbjct: 947 tatatta 953
>emb|AM000057.1| Hordeum vulgare HKT1 gene for high-affinity sodium transporter, exons 1-3 Length = 2155 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||||||||||||||||||||| || | ||||||||||| ||||| ||| |||||||| | Sbjct: 1336 ctccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgcttt 1277 Query: 94 tatattaatttacag 108 ||||||| ||||||| Sbjct: 1276 tatattagtttacag 1262 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaag 58 ||||| ||||||||||||||||||| Sbjct: 1256 ctccccctgtaaactaatataaaag 1280 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 taaatgctcttatattaatttacagagg 111 |||| |||||||||||| |||||||||| Sbjct: 1306 taaacgctcttatattagtttacagagg 1333
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13, complete sequence Length = 102842 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||||||||||||||||||||| || | ||||||||||| ||||| || |||||||||| Sbjct: 34512 ctccctctgtaaactaatataagagtgtttagattactaaagtagtattctaaatgctct 34571 Query: 94 tatattaatttacagagg 111 ||||||| ||||| |||| Sbjct: 34572 tatattagtttacggagg 34589
>gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, complete cds; and transposon MITE-like and retrotransposon Lolaog, complete sequence Length = 17220 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||| ||||||||||| | ||||||||||| ||||| |||||||||| ||| Sbjct: 16692 ctccatctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgttct 16751 Query: 94 tatatta 100 ||||||| Sbjct: 16752 tatatta 16758
>gb|AY896052.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 559556 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||| ||||||||||| | ||||||||||| ||||| |||||||||| ||| Sbjct: 885 ctccatctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgttct 944 Query: 94 tatatta 100 ||||||| Sbjct: 945 tatatta 951
>gb|AY896048.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420916 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||||||||||||||| | ||||||||||| ||||| |||||||||| | | Sbjct: 886 ctccatctgtaaactaatataaaagcgtttagattactaaagtagtgttttaaatgtttt 945 Query: 94 tatatta 100 ||||||| Sbjct: 946 tatatta 952
>gb|AY896047.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420913 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||||||||||||||| | ||||||||||| ||||| ||| |||||| ||| Sbjct: 886 ctccatctgtaaactaatataaaagcgtttagattactaaagtagtgttctaaatgttct 945 Query: 94 tatatta 100 ||||||| Sbjct: 946 tatatta 952
>gb|AY896042.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293411 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||| ||||||||||| | ||||||||||| ||||| |||||||||| ||| Sbjct: 885 ctccatctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgttct 944 Query: 94 tatatta 100 ||||||| Sbjct: 945 tatatta 951
>gb|AY896041.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293409 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||||||||||||||| | ||||||||||| ||||| ||| |||||| ||| Sbjct: 886 ctccatctgtaaactaatataaaagcgtttagattactaaagtagtgttctaaatgttct 945 Query: 94 tatatta 100 ||||||| Sbjct: 946 tatatta 952
>gb|AY896040.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293402 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||| ||||||||||| | ||||||||||| ||||| |||||||||| ||| Sbjct: 885 ctccatctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgttct 944 Query: 94 tatatta 100 ||||||| Sbjct: 945 tatatta 951
>gb|AY896037.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 236388 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 77.8 bits (39), Expect = 2e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 38 ctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctcttata 97 ||||||||| ||||||||||| | ||||||||||| ||||| |||||||||| ||||||| Sbjct: 888 ctctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgttcttata 947 Query: 98 tta 100 ||| Sbjct: 948 tta 950
>gb|AY896036.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 220523 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||| ||||||||||| | ||||||||||| ||||| |||||||||| ||| Sbjct: 885 ctccatctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgttct 944 Query: 94 tatatta 100 ||||||| Sbjct: 945 tatatta 951
>gb|AY896035.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 212306 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||| ||||||||||| | ||||||||||| ||||| |||||||||| ||| Sbjct: 885 ctccatctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgttct 944 Query: 94 tatatta 100 ||||||| Sbjct: 945 tatatta 951
>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds Length = 12080 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||||||||||||||| | ||| ||||||| ||||| ||| |||||| ||| Sbjct: 10711 ctccatctgtaaactaatataaaagcgtttaaattactaaagtagtgttctaaatgttct 10770 Query: 94 tatatta 100 ||||||| Sbjct: 10771 tatatta 10777
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||||||||||||||| | ||| ||||||| ||||| ||| |||||| ||| Sbjct: 62432 ctccatctgtaaactaatataaaagcgtttaaattactaaagtagtgttctaaatgttct 62491 Query: 94 tatatta 100 ||||||| Sbjct: 62492 tatatta 62498
>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN-H1 gene, complete cds Length = 12360 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||||||||||||||| | ||| ||||||| ||||| ||| |||||| ||| Sbjct: 11481 ctccatctgtaaactaatataaaagcgtttaaattactaaagtagtgttctaaatgttct 11540 Query: 94 tatatta 100 ||||||| Sbjct: 11541 tatatta 11547
>gb|AY896051.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531957 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||||||||||||||| | ||||||||||| |||| |||||||||| | | Sbjct: 887 ctccatctgtaaactaatataaaagcgtttagattactaaagtaatgttttaaatgttgt 946 Query: 94 tatatta 100 ||||||| Sbjct: 947 tatatta 953
>gb|AY896049.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 466460 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||||||||||||||| | ||||||||||| |||| |||||||||| | | Sbjct: 887 ctccatctgtaaactaatataaaagcgtttagattactaaagtaatgttttaaatgttgt 946 Query: 94 tatatta 100 ||||||| Sbjct: 947 tatatta 953
>gb|AY896044.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 401370 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||| ||||||||||| | ||||||||||| ||||| |||||||||| | | Sbjct: 886 ctccatctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgtttt 945 Query: 94 tatatta 100 ||||||| Sbjct: 946 tatatta 952
>gb|AY896043.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 366446 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||||||||||||||| | ||||||||||| ||||| ||| |||||| | | Sbjct: 886 ctccatctgtaaactaatataaaagcgtttagattactaaagtagtgttctaaatgtttt 945 Query: 94 tatatta 100 ||||||| Sbjct: 946 tatatta 952
>gb|AY896038.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 254894 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||||||||||||||| | ||| ||||||| ||||| ||| |||||| ||| Sbjct: 886 ctccatctgtaaactaatataaaagcgtttaaattactaaagtagtgttctaaatgttct 945 Query: 94 tatatta 100 ||||||| Sbjct: 946 tatatta 952
>emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAROUS1, exons 1-6 Length = 4034 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 ||||||| |||||||||||||| || | ||||||||||| ||| | | |||||||||| Sbjct: 2713 ctccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgctct 2772 Query: 94 tatattaatttacagagg 111 ||||||| |||||||||| Sbjct: 2773 tatattagtttacagagg 2790 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 2793 ctccctctgtaaactaatataa 2772
>gb|AF099671.1|AF099671 Secale cereale thaumatin-like protein 2 precursor (TLP2) mRNA, complete cds Length = 975 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 ||||||||||||||||||||||||| |||||| |||| ||||| ||| |||| |||| Sbjct: 642 ctccctctgtaaactaatataaaagcatttagatcactaaagtagtgttctaaacactct 701 Query: 94 tatattaatttacagagg 111 ||||||| ||||| |||| Sbjct: 702 tatattagtttacggagg 719
>gb|AF099670.1|AF099670 Secale cereale thaumatin-like protein 3 precursor (TLP3) gene, complete cds Length = 1003 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 ||||||||||||||||||||||||| |||||| |||| ||||| ||| |||| |||| Sbjct: 734 ctccctctgtaaactaatataaaagcatttagatcactaaagtagtgttctaaacactct 793 Query: 94 tatattaatttacagagg 111 ||||||| ||||| |||| Sbjct: 794 tatattagtttacggagg 811
>gb|AF096927.1|AF096927 Secale cereale thaumatin-like protein 1 precursor (TLP1) mRNA, complete cds Length = 1151 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 ||||||||||||||||||||||||| |||||| |||| ||||| ||| |||| |||| Sbjct: 632 ctccctctgtaaactaatataaaagcatttagatcactaaagtagtgttctaaacactct 691 Query: 94 tatattaatttacagagg 111 ||||||| ||||| |||| Sbjct: 692 tatattagtttacggagg 709
>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene Length = 10815 Score = 61.9 bits (31), Expect = 1e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||||||||||||||||||||| || | |||||| |||| ||||| | | |||| ||||| Sbjct: 7617 ctccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgctct 7558 Query: 94 tatatta 100 ||||||| Sbjct: 7557 tatatta 7551 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 taaatgctcttatattaatttacagagg 111 |||| |||||||||||| |||||||||| Sbjct: 7587 taaacgctcttatattagtttacagagg 7614
>gb|AY896053.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 560559 MADS box transcription factor (Vrn1) gene, partial cds Length = 1214 Score = 61.9 bits (31), Expect = 1e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||||||||||||||| | ||| ||||||| ||||| ||| |||||| | | Sbjct: 839 ctccatctgtaaactaatataaaagcgtttaaattactaaagtagtgttctaaatgtttt 898 Query: 94 tatatta 100 ||||||| Sbjct: 899 tatatta 905
>gb|AY896039.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 268242 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 61.9 bits (31), Expect = 1e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| |||||||||||||||||||| | ||| ||||||| ||||| ||| |||||| | | Sbjct: 886 ctccatctgtaaactaatataaaagcgtttaaattactaaagtagtgttctaaatgtttt 945 Query: 94 tatatta 100 ||||||| Sbjct: 946 tatatta 952
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 ||||||| |||||||||||||| || | |||||| |||| ||||| | | |||| |||| Sbjct: 6399 ctccctccgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacactct 6340 Query: 94 tatattaatttacagagg 111 ||||||| |||||||||| Sbjct: 6339 tatattagtttacagagg 6322 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||||||||||||||||||||| || | |||||| |||| ||| | | |||| ||||| Sbjct: 6319 ctccctctgtaaactaatataagagtgtttagatcactactttagtgatctaaacgctct 6378 Query: 94 tatattaatttacagagg 111 ||||||| ||||| |||| Sbjct: 6379 tatattagtttacggagg 6396 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 80 gttttaaatgctcttatattaatttacagagga 112 |||||||| ||||||||||| ||||||||||| Sbjct: 3520 gttttaaacgctcttatatttctttacagagga 3552
>emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroindoline a, cultivar PI 393494 Length = 2570 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 ||||||| |||||||||||||| || | ||||| ||||| | ||| | | |||| ||||| Sbjct: 1471 ctccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgctct 1412 Query: 94 tatattaatttacagagg 111 ||||||| |||||||||| Sbjct: 1411 tatattagtttacagagg 1394 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||||||||||||||||||||| || | |||||| |||| ||| || |||| ||||| Sbjct: 1391 ctccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgctct 1450 Query: 94 tatattaatttacagagg 111 ||||||| ||||| |||| Sbjct: 1451 tatattagtttacggagg 1468
>gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carboxylase (Acc-1,1) gene, nuclear gene encoding plastid protein, partial cds Length = 9285 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||||||||||||| ||||||| || | |||||| |||| | ||| ||| |||| ||||| Sbjct: 6464 ctccctctgtaaaccaatataagagtgtttagatcactaaaatagtgttctaaacgctct 6405 Query: 94 tatattaatttacagagg 111 ||||||| ||||| |||| Sbjct: 6404 tatattagtttacggagg 6387
>gb|AY553259.1| Hordeum murinum isolate Hor_mur phosphoenolpyruvate carboxylase (pepC) gene, exons 1, 2 and partial cds Length = 1117 Score = 54.0 bits (27), Expect = 3e-04 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 37 cctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctcttat 96 |||||||||||||||||||||| |||||| | || ||||| | | ||||||||||||| Sbjct: 536 cctctgtaaactaatataaaagcatttagatcatta-agtagtgatctaaatgctcttat 594 Query: 97 attaatttacagagg 111 |||| ||||| |||| Sbjct: 595 attagtttacggagg 609 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 84 taaatgctcttatattaatttacagaggagtac 116 |||||||| |||||||| ||||||||||||||| Sbjct: 563 taaatgcttttatattagtttacagaggagtac 531
>gb|AY133248.1| Aegilops tauschii starch synthase II gene, complete cds Length = 9024 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| ||||||||||| ||||| || | |||||| |||| ||||| | |||| ||||| Sbjct: 2893 ctccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgctct 2834 Query: 94 tatattaatttacagagg 111 ||||||||||||| |||| Sbjct: 2833 tatattaatttacggagg 2816 Score = 40.1 bits (20), Expect = 5.1 Identities = 62/76 (81%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 ||||||| ||||| |||||||| || | ||||||||||| ||| | | |||| ||||| Sbjct: 2813 ctccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgctct 2872 Query: 94 tatattaatttacaga 109 |||| || |||||||| Sbjct: 2873 tatagtagtttacaga 2888
>gb|AY553258.1| Hordeum marinum isolate Hor_mar phosphoenolpyruvate carboxylase (pepC) gene, exons 1, 2 and partial cds Length = 839 Score = 52.0 bits (26), Expect = 0.001 Identities = 68/81 (83%), Gaps = 2/81 (2%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagct--tagattactagagtagggttttaaatgct 91 |||||| |||||||||||||||||| | | |||||||||| | ||| ||| |||||||| Sbjct: 491 ctccctttgtaaactaatataaaagtgtttatagattactaaaatagtgttctaaatgct 550 Query: 92 cttatattaatttacagagga 112 | |||||| ||||| ||||| Sbjct: 551 cgtatattggtttacggagga 571
>dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch synthase II-D, complete cds Length = 7010 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 |||| ||||||||||| ||||| || | |||||| |||| ||||| | |||| ||||| Sbjct: 1649 ctccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgctct 1590 Query: 94 tatattaatttacagagg 111 ||||||||||||| |||| Sbjct: 1589 tatattaatttacggagg 1572 Score = 40.1 bits (20), Expect = 5.1 Identities = 62/76 (81%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 ||||||| ||||| |||||||| || | ||||||||||| ||| | | |||| ||||| Sbjct: 1569 ctccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgctct 1628 Query: 94 tatattaatttacaga 109 |||| || |||||||| Sbjct: 1629 tatagtagtttacaga 1644
>dbj|AB178167.1| Triticum aestivum Wcbf2-2 mRNA for AP2/EREBP type transcription factor, complete cds Length = 941 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 ||||||| |||||||||||||| || | |||||| |||| || | |||||||||||| Sbjct: 820 ctccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgctct 761 Query: 94 tatattaatttacagagg 111 ||||||| ||||| |||| Sbjct: 760 tatattagtttaccgagg 743
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and LRK19 (Lrk19) genes, complete cds Length = 35872 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 ||||||||||||| ||||||| || | |||||| |||| ||||| | | |||| ||||| Sbjct: 21655 ctccctctgtaaataaatataagagcgtttagatcactaaagtagtgatctaaacgctct 21714 Query: 94 tatattaatttacagagg 111 |||||| |||||||||| Sbjct: 21715 tatatttctttacagagg 21732 Score = 44.1 bits (22), Expect = 0.33 Identities = 64/78 (82%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 ||||||||||||| ||||||| || | |||||| |||| ||| | | |||| ||||| Sbjct: 21735 ctccctctgtaaagaaatataagagcgtttagatcactactttagtgatctaaacgctct 21676 Query: 94 tatattaatttacagagg 111 |||||| ||||||||||| Sbjct: 21675 tatatttatttacagagg 21658
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 50.1 bits (25), Expect = 0.005 Identities = 61/73 (83%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctctt 94 |||||| |||||||||||||| || | ||||| ||||| |||| | | |||||||| || Sbjct: 103669 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 103728 Query: 95 atattaatttaca 107 |||||| |||||| Sbjct: 103729 atattagtttaca 103741 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataaaag 58 |||||| |||||||||||||||||| Sbjct: 103748 ctccctttgtaaactaatataaaag 103724
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 50.1 bits (25), Expect = 0.005 Identities = 64/77 (83%) Strand = Plus / Minus Query: 35 tccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctctt 94 ||||||||||||||||||||| | |||||| |||| ||||| | | |||| | |||| Sbjct: 29821 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 29762 Query: 95 atattaatttacagagg 111 |||||| |||||||||| Sbjct: 29761 atattagtttacagagg 29745 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagat 67 |||| ||||||||||||||||| || |||||||| Sbjct: 200990 ctccatctgtaaactaatataagagtgcttagat 201023 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 29742 ctccctctgtaaactaatataa 29763 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataaaa 57 ||||||| |||||||||||||||| Sbjct: 201070 ctccctccgtaaactaatataaaa 201047
>emb|CR626926.1| Aegilops tauschii Length = 94421 Score = 50.1 bits (25), Expect = 0.005 Identities = 40/45 (88%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtag 78 |||||| |||||| ||||||||||| | |||||| |||||||||| Sbjct: 85543 ctccctatgtaaaataatataaaagcgtttagatcactagagtag 85587
>gb|AF458279.1| Triticum monococcum isolate Tm896 rga2 protein (rga2) gene, partial cds Length = 1438 Score = 50.1 bits (25), Expect = 0.005 Identities = 64/77 (83%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctctt 94 ||||||||||||||||||||| | |||||| |||| ||||| | | |||| | |||| Sbjct: 195 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 254 Query: 95 atattaatttacagagg 111 |||||| |||||||||| Sbjct: 255 atattagtttacagagg 271 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 274 ctccctctgtaaactaatataa 253
>gb|AF347066.1| Triticum aestivum truncated sucrose-phosphate synthase 4 mRNA, partial cds Length = 2642 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Minus Query: 28 cttctgctccctctgtaaactaatataa 55 ||||| |||||||||||||||||||||| Sbjct: 1451 cttctactccctctgtaaactaatataa 1424
>gb|AC008704.6| Homo sapiens chromosome 5 clone CTB-77C3, complete sequence Length = 95906 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Plus Query: 140 tataaaatgaagaacatccatacgtac 166 |||||||||||||||| |||||||||| Sbjct: 63569 tataaaatgaagaacaaccatacgtac 63595
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 46.1 bits (23), Expect = 0.082 Identities = 29/31 (93%) Strand = Plus / Plus Query: 82 tttaaatgctcttatattaatttacagagga 112 |||||| ||||||||||||||||| |||||| Sbjct: 73087 tttaaacgctcttatattaatttatagagga 73117 Score = 46.1 bits (23), Expect = 0.082 Identities = 29/31 (93%) Strand = Plus / Minus Query: 82 tttaaatgctcttatattaatttacagagga 112 ||||||||||||||||||| ||||| ||||| Sbjct: 73084 tttaaatgctcttatattagtttacggagga 73054
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Minus Query: 78 gggttttaaatgctcttatattaatttacagagg 111 ||||| ||||||||||||||||| ||||| |||| Sbjct: 88571 gggttctaaatgctcttatattagtttacggagg 88538
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagat 67 ||||||| |||||||||||||| |||| |||||| Sbjct: 177662 ctccctccgtaaactaatataagagagtttagat 177695
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 44.1 bits (22), Expect = 0.33 Identities = 64/78 (82%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaagagcttagattactagagtagggttttaaatgctct 93 ||||||| |||||||||||||| || | |||||| |||| | ||| | | ||| |||| Sbjct: 746 ctccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactct 805 Query: 94 tatattaatttacagagg 111 ||||||||||||| |||| Sbjct: 806 tatattaatttacggagg 823
>gb|AY270159.1| Triticum aestivum resistance protein T10rga2-1A gene, complete cds Length = 4768 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 1187 ctccctctgtaaactaatataa 1166 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 1109 tccctctgtaaactaatataa 1129
>emb|BX927064.8| Zebrafish DNA sequence from clone DKEY-73N8 in linkage group 24, complete sequence Length = 181758 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 95 atattaatttacagaggagtac 116 |||||||||||||||||||||| Sbjct: 166966 atattaatttacagaggagtac 166987
>gb|AF458280.1| Triticum urartu isolate Tu11498 rga2 protein (rga2) gene, partial cds Length = 1437 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 273 ctccctctgtaaactaatataa 252 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 195 tccctctgtaaactaatataa 215
>gb|AF458278.1| Triticum monococcum isolate Tm13010 rga2 protein (rga2) gene, partial cds Length = 1439 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 273 ctccctctgtaaactaatataa 252 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 195 tccctctgtaaactaatataa 215
>gb|AF458277.1| Triticum turgidum subsp. dicoccoides isolate Td9803 rga2 protein (rga2) gene, partial cds Length = 1441 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 276 ctccctctgtaaactaatataa 255 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 195 tccctctgtaaactaatataa 215
>gb|AF458276.1| Triticum turgidum subsp. dicoccoides isolate Td4467 rga2 protein (rga2) gene, partial cds Length = 1436 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 273 ctccctctgtaaactaatataa 252 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 195 tccctctgtaaactaatataa 215
>gb|AF458275.1| Triticum turgidum subsp. durum isolate Langdon rga2 protein (rga2) gene, partial cds Length = 1438 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 273 ctccctctgtaaactaatataa 252 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 195 tccctctgtaaactaatataa 215
>gb|AF458273.1| Triticum aestivum isolate ThLr101A rga2 protein (rga2) gene, partial cds Length = 1438 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 273 ctccctctgtaaactaatataa 252 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 195 tccctctgtaaactaatataa 215
>gb|AF458272.1| Triticum aestivum isolate Weique rga2 protein (rga2) gene, partial cds Length = 1435 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 273 ctccctctgtaaactaatataa 252 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 195 tccctctgtaaactaatataa 215
>gb|AF458271.1| Triticum aestivum isolate Tesia rga2 protein (rga2) gene, partial cds Length = 1438 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 273 ctccctctgtaaactaatataa 252 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 195 tccctctgtaaactaatataa 215
>gb|AF458270.1| Triticum aestivum isolate Pavon rga2 protein (rga2) gene, partial cds Length = 1438 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 273 ctccctctgtaaactaatataa 252 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 195 tccctctgtaaactaatataa 215
>gb|AF458269.1| Triticum aestivum isolate Opata rga2 protein (rga2) gene, partial cds Length = 1437 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 273 ctccctctgtaaactaatataa 252 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 195 tccctctgtaaactaatataa 215
>gb|AF458268.1| Triticum aestivum isolate Nocazari rga2 protein (rga2) gene, partial cds Length = 1437 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 272 ctccctctgtaaactaatataa 251 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 194 tccctctgtaaactaatataa 214
>gb|AF458267.1| Triticum aestivum isolate Galvez rga2 protein (rga2) gene, partial cds Length = 1436 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 272 ctccctctgtaaactaatataa 251 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 194 tccctctgtaaactaatataa 214
>gb|AF458266.1| Triticum aestivum isolate Esmer rga2 protein (rga2) gene, partial cds Length = 1437 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 273 ctccctctgtaaactaatataa 252 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 195 tccctctgtaaactaatataa 215
>gb|AF376136.1|AF376136 Triticum aestivum putative CRT/DRE-binding factor (CBF1) mRNA, complete cds Length = 800 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 82 tttaaatgctcttatattaatttacagagg 111 ||||||||||||||||||| ||||| |||| Sbjct: 729 tttaaatgctcttatattagtttaccgagg 700
>gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (TAK14), and LRK14 (Lrk14) genes, complete cds; and unknown gene Length = 43606 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 86 aatgctcttatattaatttacagagg 111 |||||||||||||| ||||||||||| Sbjct: 11082 aatgctcttatatttatttacagagg 11107
>gb|AC004968.1|AC004968 Homo sapiens PAC clone RP5-1119N5 from 14q24.3, complete sequence Length = 108822 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 ttacagaggagtacaaaacatt 124 |||||||||||||||||||||| Sbjct: 13144 ttacagaggagtacaaaacatt 13165
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 47497 ctccctctgtaaactaatataa 47518 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 47575 tccctctgtaaactaatataa 47555 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 80 gttttaaatgctcttatattaatttacagagga 112 |||||||| ||||||||||| ||||||||||| Sbjct: 633 gttttaaacgctcttatatttctttacagagga 665
>gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence Length = 1082 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataa 55 |||||||||||||||||||||| Sbjct: 1024 ctccctctgtaaactaatataa 1003 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 taaatgctcttatattaatttacagagg 111 |||| |||||||||||| |||||||||| Sbjct: 994 taaaagctcttatattagtttacagagg 1021
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 84 taaatgctcttatattaatttacagagga 112 |||||||||||||||| ||||||||||| Sbjct: 117338 taaatgctcttatatttctttacagagga 117310
>gb|AC146109.3| Pan troglodytes BAC clone RP43-22H22 from 7, complete sequence Length = 164618 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggatttttctgccttctgctc 36 ||||||||||||||||||||| Sbjct: 55399 ggatttttctgccttctgctc 55379
>emb|CR848835.7| Zebrafish DNA sequence from clone DKEY-71G12 in linkage group 15, complete sequence Length = 216994 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gttttaaatgctcttatatta 100 ||||||||||||||||||||| Sbjct: 177631 gttttaaatgctcttatatta 177611
>gb|AC074121.16| Homo sapiens BAC clone RP11-725M1 from 7, complete sequence Length = 166379 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggatttttctgccttctgctc 36 ||||||||||||||||||||| Sbjct: 33154 ggatttttctgccttctgctc 33134
>gb|AC087341.4| Homo sapiens chromosome 8, clone RP11-381I15, complete sequence Length = 177835 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 tatttagggatttttctgcct 29 ||||||||||||||||||||| Sbjct: 154451 tatttagggatttttctgcct 154431
>gb|AF458265.1| Triticum aestivum isolate Can3842 rga2 protein (rga2) gene, partial cds Length = 1392 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tccctctgtaaactaatataa 55 ||||||||||||||||||||| Sbjct: 195 tccctctgtaaactaatataa 215
>gb|AC110183.10| Mus musculus chromosome 3, clone RP24-406M9, complete sequence Length = 171452 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ttttaaatgctcttatattaa 101 ||||||||||||||||||||| Sbjct: 20075 ttttaaatgctcttatattaa 20095
>gb|AC152832.3| Ornithorhynchus anatinus BAC clone OABb-104A1 from chromosome unknown, complete sequence Length = 161382 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 aagcagcacaactagtcaggg 208 ||||||||||||||||||||| Sbjct: 9936 aagcagcacaactagtcaggg 9956
>dbj|AP005663.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1570G8, complete sequence Length = 151817 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 tatttagggatttttctgcct 29 ||||||||||||||||||||| Sbjct: 44967 tatttagggatttttctgcct 44947
>gb|AC172879.1| Brassica rapa subsp. pekinensis clone KBrH070I10, complete sequence Length = 107205 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 tccataacattcctctccaag 187 ||||||||||||||||||||| Sbjct: 69258 tccataacattcctctccaag 69238
>gb|AC105161.10| Mus musculus chromosome 1, clone RP24-73O16, complete sequence Length = 255501 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatat 53 |||||||||||||||||||| Sbjct: 148428 ctccctctgtaaactaatat 148409
>gb|AY230322.1| Triticum aestivum FCA-A1 (Fca) gene, partial cds Length = 9585 Score = 40.1 bits (20), Expect = 5.1 Identities = 62/75 (82%), Gaps = 2/75 (2%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatataaaagagcttagattactaga--gtagggttttaaatgct 91 ||||||| ||||| |||||||| || | ||| ||||||| | |||| | | |||||||| Sbjct: 9244 ctccctccgtaaattaatataagagtgtttaaattactataaagtagtgatctaaatgct 9185 Query: 92 cttatattaatttac 106 |||||||||||||| Sbjct: 9184 tttatattaatttac 9170
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 atttacagaggagtacaaaa 120 |||||||||||||||||||| Sbjct: 342371 atttacagaggagtacaaaa 342390
>emb|AL445189.7| Human DNA sequence from clone RP11-249L21 on chromosome 6 Contains part of a novel gene, a ribosomal protein S12 (RPS12) pseudogene, the 5' end of a novel gene, an ATP synthase, H+ transporting, mitochondrial F0 complex, subunit f, isoform 2 (ATP5J2) psuedogene and part of a novel gene, complete sequence Length = 134566 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 aaatgctcttatattaattt 104 |||||||||||||||||||| Sbjct: 2075 aaatgctcttatattaattt 2094
>emb|AL390785.15| Human DNA sequence from clone RP11-325N9 on chromosome 10, complete sequence Length = 203169 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 gttttaaatgctcttatattaatt 103 ||||||||||| |||||||||||| Sbjct: 132861 gttttaaatgcacttatattaatt 132838
>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene Length = 1862 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 ctccctctgtaaactaatataaaa 57 |||| ||||||||||||||||||| Sbjct: 1703 ctccttctgtaaactaatataaaa 1726
>emb|CR354383.8| Zebrafish DNA sequence from clone CH211-123O7 in linkage group 21, complete sequence Length = 168569 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 gagtacaaaacattaacaga 130 |||||||||||||||||||| Sbjct: 164013 gagtacaaaacattaacaga 164032
>dbj|AK148812.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120449I22 product:unclassifiable, full insert sequence Length = 900 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ctccctctgtaaactaatat 53 |||||||||||||||||||| Sbjct: 285 ctccctctgtaaactaatat 266
>gb|AC158399.2| Mus musculus BAC clone RP23-246A2 from chromosome 14, complete sequence Length = 198948 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 agtatttagggatttttctgcctt 30 |||||||||||| ||||||||||| Sbjct: 156882 agtatttagggaattttctgcctt 156905
>gb|AC098800.3| Homo sapiens BAC clone RP11-666P13 from 2, complete sequence Length = 142003 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 cagtatttagggatttttct 25 |||||||||||||||||||| Sbjct: 123366 cagtatttagggatttttct 123347
>gb|AC158510.2| Mus musculus BAC clone RP24-236E11 from chromosome 9, complete sequence Length = 178963 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 agtttctcttctgttgctaa 327 |||||||||||||||||||| Sbjct: 83476 agtttctcttctgttgctaa 83495
>gb|AC093740.2| Homo sapiens BAC clone RP11-24G22 from 2, complete sequence Length = 168006 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 taacattcctctccaagaagcagc 194 ||||||||||| |||||||||||| Sbjct: 40685 taacattcctccccaagaagcagc 40708
>dbj|AP000381.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K17E12 Length = 63604 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 gagtacaaaacattaacaga 130 |||||||||||||||||||| Sbjct: 3900 gagtacaaaacattaacaga 3919
>dbj|AP006538.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT18J10, TM0323a, complete sequence Length = 95559 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ctctgtaaactaatataaaa 57 |||||||||||||||||||| Sbjct: 68959 ctctgtaaactaatataaaa 68978 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,850,408 Number of Sequences: 3902068 Number of extensions: 3850408 Number of successful extensions: 77132 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 76923 Number of HSP's gapped (non-prelim): 204 length of query: 381 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 359 effective length of database: 17,147,199,772 effective search space: 6155844718148 effective search space used: 6155844718148 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
