| Clone Name | rbast62b02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC009391.16| Drosophila melanogaster clone BACR21I23, complete sequence Length = 189254 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 339 aacacctttatacagaagactgtcg 363 |||||||||||||| |||||||||| Sbjct: 115406 aacacctttatacaaaagactgtcg 115430
>ref|XM_790260.1| PREDICTED: Strongylocentrotus purpuratus similar to Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor) (CAIN) (LOC590663), mRNA Length = 3750 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 434 ccatttcctcatccgtgatggaatc 458 |||||||||||||| |||||||||| Sbjct: 2626 ccatttcctcatccatgatggaatc 2602
>emb|AL672010.8| Mouse DNA sequence from clone RP23-223C15 on chromosome 11 Contains three novel genes and a CpG island, complete sequence Length = 193223 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 tctggggccacccttaacacc 344 ||||||||||||||||||||| Sbjct: 83660 tctggggccacccttaacacc 83640
>dbj|AK049137.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330006H24 product:inferred: Similar to KIAA0789 gene product {Homo sapiens}, full insert sequence Length = 1735 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 tctggggccacccttaacacc 344 ||||||||||||||||||||| Sbjct: 1299 tctggggccacccttaacacc 1279
>emb|BX276093.11| Zebrafish DNA sequence from clone DKEY-94F20 in linkage group 12, complete sequence Length = 38123 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 gaattattttgattaaaaatg 33 ||||||||||||||||||||| Sbjct: 34583 gaattattttgattaaaaatg 34563
>gb|AE003780.4| Drosophila melanogaster chromosome 3R, section 118 of 118 of the complete sequence Length = 256818 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 339 aacacctttatacagaagactgtcg 363 |||||||||||||| |||||||||| Sbjct: 182970 aacacctttatacaaaagactgtcg 182994
>emb|AL928975.10| Zebrafish DNA sequence from clone CH211-133N4, complete sequence Length = 174480 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tgaattattttgattaaaaat 32 ||||||||||||||||||||| Sbjct: 57164 tgaattattttgattaaaaat 57144
>gb|AC153728.1| Mus musculus BAC RP23-83N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226417 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gagcctcgccctctttctgg 276 |||||||||||||||||||| Sbjct: 51143 gagcctcgccctctttctgg 51124
>ref|NM_106171.2| Arabidopsis thaliana unknown protein AT1G75150 mRNA, complete cds Length = 2738 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 ttcttttccatttcctcatc 446 |||||||||||||||||||| Sbjct: 1782 ttcttttccatttcctcatc 1763
>gb|AC134397.6| Mus musculus chromosome 13, clone RP23-265J12, complete sequence Length = 192662 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gagcctcgccctctttctgg 276 |||||||||||||||||||| Sbjct: 185258 gagcctcgccctctttctgg 185277
>ref|XR_004463.1| PREDICTED: Mus musculus similar to multi-substrate lipid kinase (LOC672697), mRNA Length = 2208 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gagcctcgccctctttctgg 276 |||||||||||||||||||| Sbjct: 1709 gagcctcgccctctttctgg 1728
>ref|XR_002000.1| PREDICTED: Mus musculus similar to multi-substrate lipid kinase (LOC667266), mRNA Length = 2205 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gagcctcgccctctttctgg 276 |||||||||||||||||||| Sbjct: 1706 gagcctcgccctctttctgg 1725
>emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome Length = 1395502 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ttgcagcaggtgaattattt 21 |||||||||||||||||||| Sbjct: 503807 ttgcagcaggtgaattattt 503788
>gb|AC102368.6| Mus musculus chromosome 14, clone RP23-220D8, complete sequence Length = 208781 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 aaattgttcataatttcatgattg 144 |||||||||| ||||||||||||| Sbjct: 134066 aaattgttcaaaatttcatgattg 134043
>gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, complete sequence Length = 247394 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gagcctcgccctctttctgg 276 |||||||||||||||||||| Sbjct: 2070 gagcctcgccctctttctgg 2051
>emb|AL161436.12| Human DNA sequence from clone RP11-377N20 on chromosome 6 Contains part of a novel gene, complete sequence Length = 124814 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcagcaggtgaattattttg 23 |||||||||||||||||||| Sbjct: 62817 gcagcaggtgaattattttg 62798
>emb|BX842704.15| Zebrafish DNA sequence from clone DKEY-177D20 in linkage group 20 Contains four CpG islands, complete sequence Length = 154958 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 atattcagttgtgaaatttg 180 |||||||||||||||||||| Sbjct: 68930 atattcagttgtgaaatttg 68911
>gb|AC008543.9| Homo sapiens chromosome 19 clone CTC-499B15, complete sequence Length = 231247 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ttcatgatactgaaaggaat 63 |||||||||||||||||||| Sbjct: 28873 ttcatgatactgaaaggaat 28854
>gb|AC098965.2| Homo sapiens chromosome 16 clone RP11-419L9, complete sequence Length = 191911 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gattaaaaatggaggtagtt 42 |||||||||||||||||||| Sbjct: 87343 gattaaaaatggaggtagtt 87362
>dbj|AK076224.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:4022449D19 product:PUTATIVE LIPID KINASE, full insert sequence Length = 2121 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gagcctcgccctctttctgg 276 |||||||||||||||||||| Sbjct: 1631 gagcctcgccctctttctgg 1650
>gb|AC154460.2| Mus musculus BAC clone RP24-163G22 from chromosome 13, complete sequence Length = 197149 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gagcctcgccctctttctgg 276 |||||||||||||||||||| Sbjct: 98533 gagcctcgccctctttctgg 98552
>gb|AC025814.7|AC025814 Arabidopsis thaliana chromosome 1 BAC F22H5 genomic sequence, complete sequence Length = 68041 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 ttcttttccatttcctcatc 446 |||||||||||||||||||| Sbjct: 60497 ttcttttccatttcctcatc 60478
>gb|BC093525.1| Mus musculus multiple substrate lipid kinase, mRNA (cDNA clone MGC:102619 IMAGE:5151866), complete cds Length = 2209 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gagcctcgccctctttctgg 276 |||||||||||||||||||| Sbjct: 1698 gagcctcgccctctttctgg 1717
>ref|NM_023538.1| Mus musculus multiple substrate lipid kinase (Mulk), mRNA Length = 2236 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gagcctcgccctctttctgg 276 |||||||||||||||||||| Sbjct: 1722 gagcctcgccctctttctgg 1741
>gb|AC102738.9| Mus musculus chromosome 3, clone RP24-303G10, complete sequence Length = 166697 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 gagcagtggtctggggccaccctt 338 ||||||||||||||||||| |||| Sbjct: 91636 gagcagtggtctggggccatcctt 91659
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aagtactcagtaatattcag 168 |||||||||||||||||||| Sbjct: 5885419 aagtactcagtaatattcag 5885438
>emb|AL670024.7| Mouse DNA sequence from clone RP23-254F7 on chromosome X, complete sequence Length = 199747 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gttgggcattcacttcctct 252 |||||||||||||||||||| Sbjct: 146022 gttgggcattcacttcctct 146003
>gb|AC149886.2| Xenopus tropicalis clone ISB-145C16, complete sequence Length = 113384 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 gtgaattattttgattaaaa 30 |||||||||||||||||||| Sbjct: 103125 gtgaattattttgattaaaa 103106
>gb|BC019145.1| Mus musculus multiple substrate lipid kinase, mRNA (cDNA clone MGC:29378 IMAGE:5051535), complete cds Length = 2236 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gagcctcgccctctttctgg 276 |||||||||||||||||||| Sbjct: 1722 gagcctcgccctctttctgg 1741
>dbj|AP003477.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB2047A4 Length = 179110 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 aattattttgattaaaaatg 33 |||||||||||||||||||| Sbjct: 72202 aattattttgattaaaaatg 72221
>emb|AJ401619.1|MMU401619 Mus musculus mRNA for putative lipid kinase Length = 2199 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gagcctcgccctctttctgg 276 |||||||||||||||||||| Sbjct: 1702 gagcctcgccctctttctgg 1721
>dbj|AB044566.1| Oncorhynchus mykiss mRNA for inhibin, complete cds Length = 1296 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 aattattttgattaaaaatg 33 |||||||||||||||||||| Sbjct: 1266 aattattttgattaaaaatg 1247 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,460,773 Number of Sequences: 3902068 Number of extensions: 4460773 Number of successful extensions: 93275 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93210 Number of HSP's gapped (non-prelim): 65 length of query: 465 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 443 effective length of database: 17,147,199,772 effective search space: 7596209498996 effective search space used: 7596209498996 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)