ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast61g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RXFP1_HUMAN (Q9HBX9) Relaxin receptor 1 (Relaxin family peptide ... 29 3.2
2TGMH_TACTR (Q05187) Hemocyte protein-glutamine gamma-glutamyltra... 28 4.2
3CLPP2_BACSK (Q5WDK0) ATP-dependent Clp protease proteolytic subu... 27 9.3

>RXFP1_HUMAN (Q9HBX9) Relaxin receptor 1 (Relaxin family peptide receptor 1)|
           (Leucine-rich repeat-containing G-protein coupled
           receptor 7)
          Length = 757

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +2

Query: 17  ISNVLTPYISHVLHTRTTKQARGLTKVRGEMRRKRDSKGRKQLQSTFIYVHAYAYQHM 190
           I++ L P I + L TR  K+           R+  DSKG+K    +FI+V  +  Q M
Sbjct: 672 INSALNP-ILYTLTTRPFKEMIHRFWYNYRQRKSMDSKGQKTYAPSFIWVEMWPLQEM 728



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>TGMH_TACTR (Q05187) Hemocyte protein-glutamine gamma-glutamyltransferase (EC|
           2.3.2.13) (Hemocyte transglutaminase) (TGase)
          Length = 764

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +2

Query: 98  RGEMRRKRDSKGRKQLQSTFIYVHAYAYQHMHERGHEMGRDWGG 229
           RG M R R ++ R++ +      H+Y    +     E GR+W G
Sbjct: 6   RGNMFRNRSTRYRRRPRYRAENYHSYMLDLLENMNEEFGRNWWG 49



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>CLPP2_BACSK (Q5WDK0) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 195

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 257 GKKLFLGSFTLPNHDPSHGLVHAYADMHMHARR 159
           GK++ L +  +  H P  G+    ADM +HARR
Sbjct: 110 GKRMALPNSEVMIHQPLGGMQGQAADMEIHARR 142


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,589,840
Number of Sequences: 219361
Number of extensions: 920821
Number of successful extensions: 2520
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2516
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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