>dbj|AK067767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119P15, full
            insert sequence
          Length = 1352

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                        
Query: 305  agcgggaactgtaacttctcgaaaataaggatagcaacaactggtcctgcaaaatctcca 364
            ||||| ||||| ||||||||||||| ||| || || |||| |||||| || |||||||| 
Sbjct: 1126 agcggcaactggaacttctcgaaaacaagtatggcgacaattggtcccgcgaaatctccc 1067

                                                 
Query: 365  aggatacaaccaatccactgtccatgcactggatgca 401
            |   ||||||||| |||||||||||| ||||||||||
Sbjct: 1066 aatgtacaaccaagccactgtccatgtactggatgca 1030

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                           
Query: 305      agcgggaactgtaacttctcgaaaataaggatagcaacaactggtcctgcaaaatctcc 363
                ||||| ||||| ||||||||||||| ||| || || |||| |||||| || ||||||||
Sbjct: 18980006 agcggcaactggaacttctcgaaaacaagtatggcgacaattggtcccgcgaaatctcc 18980064



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 373      accaatccactgtccatgcactggatgca 401
                ||||| |||||||||||| ||||||||||
Sbjct: 18980199 accaagccactgtccatgtactggatgca 18980227

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                           
Query: 305      agcgggaactgtaacttctcgaaaataaggatagcaacaactggtcctgcaaaatctcc 363
                ||||| ||||| ||||||||||||| ||| || || |||| |||||| || ||||||||
Sbjct: 18906233 agcggcaactggaacttctcgaaaacaagtatggcgacaattggtcccgcgaaatctcc 18906291



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 373      accaatccactgtccatgcactggatgca 401
                ||||| |||||||||||| ||||||||||
Sbjct: 18906426 accaagccactgtccatgtactggatgca 18906454

>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151203

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 305   agcgggaactgtaacttctcgaaaataaggatagcaacaactggtcctgcaaaatctcc 363
             ||||| ||||| ||||||||||||| ||| || || |||| |||||| || ||||||||
Sbjct: 76123 agcggcaactggaacttctcgaaaacaagtatggcgacaattggtcccgcgaaatctcc 76181



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 373   accaatccactgtccatgcactggatgca 401
             ||||| |||||||||||| ||||||||||
Sbjct: 76316 accaagccactgtccatgtactggatgca 76344

>gb|AC147358.2| Xenopus tropicalis clone CH216-71J8, complete sequence
          Length = 170238

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 207    tccacttcatgttcttcaaaaccag 231
              |||||||||||||| ||||||||||
Sbjct: 152498 tccacttcatgttcctcaaaaccag 152522

>gb|AC147893.2| Xenopus tropicalis clone CH216-36J13, complete sequence
          Length = 159658

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 207   tccacttcatgttcttcaaaaccag 231
             |||||||||||||| ||||||||||
Sbjct: 98487 tccacttcatgttcctcaaaaccag 98463

>emb|BX928754.9| Zebrafish DNA sequence from clone DKEY-169I10 in linkage group 13,
              complete sequence
          Length = 263849

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 207    tccacttcatgttcttcaaaa 227
              |||||||||||||||||||||
Sbjct: 142880 tccacttcatgttcttcaaaa 142900

>gb|AC139754.4| Mus musculus BAC clone RP24-92J3 from 10, complete sequence
          Length = 222053

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 348   gtcctgcaaaatctccaagga 368
             |||||||||||||||||||||
Sbjct: 92958 gtcctgcaaaatctccaagga 92978

>emb|CR855710.2| Xenopus tropicalis finished cDNA, clone TGas061j10
          Length = 2259

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 207  tccacttcatgttcttcaaaaccag 231
            |||||||||||||| ||||||||||
Sbjct: 1680 tccacttcatgttcctcaaaaccag 1704

>emb|AJ012011.1|OAU012011 Oreochromis aureus mRNA for c-ski protein (class I)
          Length = 3173

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 384  gtccatgcactggatgcagg 403
            ||||||||||||||||||||
Sbjct: 1212 gtccatgcactggatgcagg 1193

>gb|AC069224.16| Homo sapiens 3 BAC RP11-16N11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164941

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 272    tgtgtagcgggagatggtgg 291
              ||||||||||||||||||||
Sbjct: 141976 tgtgtagcgggagatggtgg 141995

>dbj|AB192511.1| Sus scrofa genomic DNA, chromosome 7, BAC clone: L014P15, complete
              sequence
          Length = 164132

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ttcaaaatctgaagcacagt 46
              ||||||||||||||||||||
Sbjct: 131985 ttcaaaatctgaagcacagt 132004

>gb|AC008610.7| Homo sapiens chromosome 5 clone CTB-129O4, complete sequence
          Length = 145242

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   gttcttcaaaaccaggcagg 236
             ||||||||||||||||||||
Sbjct: 74686 gttcttcaaaaccaggcagg 74705

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 211      cttcatgttcttcaaaacca 230
                ||||||||||||||||||||
Sbjct: 17239068 cttcatgttcttcaaaacca 17239087

>dbj|AP004224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1111E11
          Length = 152835

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    cttcatgttcttcaaaacca 230
              ||||||||||||||||||||
Sbjct: 152024 cttcatgttcttcaaaacca 152043

>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1080D07
          Length = 173856

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  cttcatgttcttcaaaacca 230
            ||||||||||||||||||||
Sbjct: 5329 cttcatgttcttcaaaacca 5348

>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    aaaagctattaaccatgcat 148
              ||||||||||||||||||||
Sbjct: 447574 aaaagctattaaccatgcat 447555

>gb|AY337402.1| Mallocybe sp. PBM 2397 RNA polymerase II second largest subunit
           (RPB2) gene, partial cds
          Length = 749

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 339 caacaactggtcctgcaaaa 358
           ||||||||||||||||||||
Sbjct: 347 caacaactggtcctgcaaaa 366

>gb|AY337374.1| Mallocybe flavicothurnata voucher PBM 1615 (WTU) Washington
           note-OrgMod epithet 'flavicothurnata' will be applied to
           this species in the genus Mallocybe. RNA polymerase II
           second largest subunit (RPB2) gene, partial cds
          Length = 683

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 339 caacaactggtcctgcaaaa 358
           ||||||||||||||||||||
Sbjct: 328 caacaactggtcctgcaaaa 347

>dbj|AP001189.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-672A2, complete
             sequence
          Length = 186389

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   tcagctttgagctccaagtt 177
             ||||||||||||||||||||
Sbjct: 79352 tcagctttgagctccaagtt 79371


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,461,415
Number of Sequences: 3902068
Number of extensions: 3461415
Number of successful extensions: 67864
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67771
Number of HSP's gapped (non-prelim): 93
length of query: 411
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 389
effective length of database: 17,147,199,772
effective search space: 6670260711308
effective search space used: 6670260711308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)