| Clone Name | rbast61b05 |
|---|---|
| Clone Library Name | barley_pub |
>HUTH_BACHK (Q6HFE9) Histidine ammonia-lyase (EC 4.3.1.3) (Histidase)| Length = 505 Score = 30.8 bits (68), Expect = 1.3 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1 Query: 121 LKRSYLETDGVVSCPSKMAVVVTCTRTVE 35 +KR LE +GV +CP+ M V C VE Sbjct: 14 MKRLLLEGEGVTACPNSMQKVAECREVVE 42
>HUTH_BACC1 (Q733H8) Histidine ammonia-lyase (EC 4.3.1.3) (Histidase)| Length = 505 Score = 30.8 bits (68), Expect = 1.3 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1 Query: 121 LKRSYLETDGVVSCPSKMAVVVTCTRTVE 35 +KR LE +GV +CP+ M V C VE Sbjct: 14 MKRLLLEGEGVTACPTSMQKVAECREVVE 42
>HUTH_BACAN (Q81Y45) Histidine ammonia-lyase (EC 4.3.1.3) (Histidase)| Length = 505 Score = 30.8 bits (68), Expect = 1.3 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1 Query: 121 LKRSYLETDGVVSCPSKMAVVVTCTRTVE 35 +KR LE +GV +CP+ M V C VE Sbjct: 14 MKRLLLEGEGVTACPTSMQKVAECREVVE 42
>HUTH_BACCR (Q81AC6) Histidine ammonia-lyase (EC 4.3.1.3) (Histidase)| Length = 506 Score = 30.8 bits (68), Expect = 1.3 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1 Query: 121 LKRSYLETDGVVSCPSKMAVVVTCTRTVE 35 +KR LE +GV +CP+ M V C VE Sbjct: 15 MKRLLLEGEGVTACPTSMQKVAECREVVE 43
>SYNJ2_MOUSE (Q9D2G5) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1434 Score = 30.4 bits (67), Expect = 1.7 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 7/65 (10%) Frame = -3 Query: 176 FRVYIHSFCFVCSHLVKSLKTLIFRNGWSSFLPEQDG--SGCNLYAYS*IQW-----YRS 18 F+++ SFCFVCSHL + RN + + SG N++++ + W YR Sbjct: 672 FQLHSTSFCFVCSHLTAGQSQVKERNEDYREITHKLSFPSGRNIFSHDYVFWCGDFNYRI 731 Query: 17 EQTFQ 3 + T++ Sbjct: 732 DLTYE 736
>GATA_RHIME (Q92QK7) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)| (Glu-ADT subunit A) Length = 493 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -1 Query: 214 GTEGVHTNVCRHILECIFTHFASYV 140 GTEG+HT C HIL+ + S V Sbjct: 83 GTEGIHTQACSHILDGFEPRYESTV 107
>GATA_RHILO (Q98M95) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)| (Glu-ADT subunit A) Length = 521 Score = 29.3 bits (64), Expect = 3.7 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -1 Query: 214 GTEGVHTNVCRHILE 170 GTEGVHT C H+L+ Sbjct: 83 GTEGVHTQACSHVLD 97
>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1496 Score = 29.3 bits (64), Expect = 3.7 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%) Frame = -3 Query: 176 FRVYIHSFCFVCSHLVKSLKTLIFRNGWSSFLPEQDG--SGCNLYAYS*IQW-----YRS 18 F+ + SFCF+CSHL + RN + + SG N++++ + W YR Sbjct: 689 FQFHSTSFCFICSHLTAGQSQVKERNEDYREITHKLSFPSGRNIFSHDYVFWCGDFNYRI 748 Query: 17 EQTFQ 3 + T++ Sbjct: 749 DLTYE 753
>SYC_SYNEL (Q8DHW6) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 486 Score = 29.3 bits (64), Expect = 3.7 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = +2 Query: 29 TVFNCTRTSYNHCHLARARNY 91 T++ C T Y++CHL AR+Y Sbjct: 25 TIYACGVTVYDYCHLGHARSY 45
>SYC_ANASP (Q8YXW5) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 486 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +2 Query: 2 IETFARSCTTVFNCTRTSYNHCHLARARNYSI 97 +ET ++ C T Y++CHL AR+Y + Sbjct: 16 LETVEPGKVKMYCCGVTVYDYCHLGHARSYIV 47 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,256,972 Number of Sequences: 219361 Number of extensions: 962179 Number of successful extensions: 2114 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2091 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2114 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)