| Clone Name | rbast60g10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017221.1| Zea mays clone EL01N0372H02.c mRNA sequence Length = 1252 Score = 266 bits (134), Expect = 5e-68 Identities = 206/230 (89%) Strand = Plus / Minus Query: 136 tcttccagctgcgaaatgatgcttacaaacacttgaaagccttgggccatatctgaaaac 195 ||||||||||| ||||||||||| | |||||| |||||||| |||||||| ||||||||| Sbjct: 907 tcttccagctgtgaaatgatgctcagaaacacctgaaagccctgggccatgtctgaaaac 848 Query: 196 agacaatactcgttcttcgcgtggtacgtcttcagtaaaccatatccagctgtttgaaca 255 ||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 847 agacagtactcgttcttcgcatggtacgtcttcagtaagccatatccagctgtttgaaca 788 Query: 256 tcaaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatggaatatggc 315 |||||||| || ||||||||| |||| || ||||| | |||||||||||||||||||||| Sbjct: 787 tcaaatccctcgtcctgtaatccccggattagaggtagactcccggtgatggaatatggc 728 Query: 316 tctacgtatccaactatttcctcagttgctttgcacaatgcttgaaagcc 365 || |||| ||||||||||||| ||||||||||| ||||| ||| |||| Sbjct: 727 tccacgtggccaactatttccttggttgctttgcataatgcatgatagcc 678
>ref|XM_506898.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1148_D05.1 patrial mRNA Length = 1652 Score = 240 bits (121), Expect = 3e-60 Identities = 202/229 (88%) Strand = Plus / Minus Query: 137 cttccagctgcgaaatgatgcttacaaacacttgaaagccttgggccatatctgaaaaca 196 |||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||||| | Sbjct: 1398 cttccaactgtgaaatgatgctcagaaatacttgaaagccttgggccatatctgaaaata 1339 Query: 197 gacaatactcgttcttcgcgtggtacgtcttcagtaaaccatatccagctgtttgaacat 256 |||| ||||||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||| Sbjct: 1338 gacagtactcgttctttgcgtggtatgtcttgagtaagccatacccagcagtctgaacat 1279 Query: 257 caaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatggaatatggct 316 |||| ||||||||||||||||||| |||||| |||| |||||| || ||||||||||| | Sbjct: 1278 caaacccttcatcctgtaattccctaatcaggggcagactcccagtaatggaatatggtt 1219 Query: 317 ctacgtatccaactatttcctcagttgctttgcacaatgcttgaaagcc 365 | |||| || || |||||||||||||||||||| |||||||||||||| Sbjct: 1218 ccacgtggccgacaatttcctcagttgctttgcataatgcttgaaagcc 1170
>ref|XM_467237.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1652 Score = 240 bits (121), Expect = 3e-60 Identities = 202/229 (88%) Strand = Plus / Minus Query: 137 cttccagctgcgaaatgatgcttacaaacacttgaaagccttgggccatatctgaaaaca 196 |||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||||| | Sbjct: 1398 cttccaactgtgaaatgatgctcagaaatacttgaaagccttgggccatatctgaaaata 1339 Query: 197 gacaatactcgttcttcgcgtggtacgtcttcagtaaaccatatccagctgtttgaacat 256 |||| ||||||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||| Sbjct: 1338 gacagtactcgttctttgcgtggtatgtcttgagtaagccatacccagcagtctgaacat 1279 Query: 257 caaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatggaatatggct 316 |||| ||||||||||||||||||| |||||| |||| |||||| || ||||||||||| | Sbjct: 1278 caaacccttcatcctgtaattccctaatcaggggcagactcccagtaatggaatatggtt 1219 Query: 317 ctacgtatccaactatttcctcagttgctttgcacaatgcttgaaagcc 365 | |||| || || |||||||||||||||||||| |||||||||||||| Sbjct: 1218 ccacgtggccgacaatttcctcagttgctttgcataatgcttgaaagcc 1170
>dbj|AK105916.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H10, full insert sequence Length = 1711 Score = 240 bits (121), Expect = 3e-60 Identities = 202/229 (88%) Strand = Plus / Minus Query: 137 cttccagctgcgaaatgatgcttacaaacacttgaaagccttgggccatatctgaaaaca 196 |||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||||| | Sbjct: 1457 cttccaactgtgaaatgatgctcagaaatacttgaaagccttgggccatatctgaaaata 1398 Query: 197 gacaatactcgttcttcgcgtggtacgtcttcagtaaaccatatccagctgtttgaacat 256 |||| ||||||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||| Sbjct: 1397 gacagtactcgttctttgcgtggtatgtcttgagtaagccatacccagcagtctgaacat 1338 Query: 257 caaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatggaatatggct 316 |||| ||||||||||||||||||| |||||| |||| |||||| || ||||||||||| | Sbjct: 1337 caaacccttcatcctgtaattccctaatcaggggcagactcccagtaatggaatatggtt 1278 Query: 317 ctacgtatccaactatttcctcagttgctttgcacaatgcttgaaagcc 365 | |||| || || |||||||||||||||||||| |||||||||||||| Sbjct: 1277 ccacgtggccgacaatttcctcagttgctttgcataatgcttgaaagcc 1229
>dbj|AK101568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050F24, full insert sequence Length = 1688 Score = 240 bits (121), Expect = 3e-60 Identities = 202/229 (88%) Strand = Plus / Minus Query: 137 cttccagctgcgaaatgatgcttacaaacacttgaaagccttgggccatatctgaaaaca 196 |||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||||| | Sbjct: 1434 cttccaactgtgaaatgatgctcagaaatacttgaaagccttgggccatatctgaaaata 1375 Query: 197 gacaatactcgttcttcgcgtggtacgtcttcagtaaaccatatccagctgtttgaacat 256 |||| ||||||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||| Sbjct: 1374 gacagtactcgttctttgcgtggtatgtcttgagtaagccatacccagcagtctgaacat 1315 Query: 257 caaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatggaatatggct 316 |||| ||||||||||||||||||| |||||| |||| |||||| || ||||||||||| | Sbjct: 1314 caaacccttcatcctgtaattccctaatcaggggcagactcccagtaatggaatatggtt 1255 Query: 317 ctacgtatccaactatttcctcagttgctttgcacaatgcttgaaagcc 365 | |||| || || |||||||||||||||||||| |||||||||||||| Sbjct: 1254 ccacgtggccgacaatttcctcagttgctttgcataatgcttgaaagcc 1206
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 113 bits (57), Expect = 4e-22 Identities = 87/97 (89%) Strand = Plus / Minus Query: 137 cttccagctgcgaaatgatgcttacaaacacttgaaagccttgggccatatctgaaaaca 196 |||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||||| | Sbjct: 28385142 cttccaactgtgaaatgatgctcagaaatacttgaaagccttgggccatatctgaaaata 28385083 Query: 197 gacaatactcgttcttcgcgtggtacgtcttcagtaa 233 |||| ||||||||||| |||||||| ||||| ||||| Sbjct: 28385082 gacagtactcgttctttgcgtggtatgtcttgagtaa 28385046 Score = 97.6 bits (49), Expect = 2e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 269 cctgtaattcccgaatcagaggcaaactcccggtgatggaatatggctctacgtatccaa 328 |||||||||||| |||||| |||| |||||| || ||||||||||| || |||| || | Sbjct: 28384682 cctgtaattccctaatcaggggcagactcccagtaatggaatatggttccacgtggccga 28384623 Query: 329 ctatttcctcagttgctttgcacaatgcttgaaagcc 365 | |||||||||||||||||||| |||||||||||||| Sbjct: 28384622 caatttcctcagttgctttgcataatgcttgaaagcc 28384586 Score = 46.1 bits (23), Expect = 0.079 Identities = 35/39 (89%) Strand = Plus / Minus Query: 234 accatatccagctgtttgaacatcaaatccttcatcctg 272 |||||| ||||| || ||||||||||| ||||||||||| Sbjct: 28384798 accatacccagcagtctgaacatcaaacccttcatcctg 28384760
>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1148_D05 Length = 155146 Score = 113 bits (57), Expect = 4e-22 Identities = 87/97 (89%) Strand = Plus / Minus Query: 137 cttccagctgcgaaatgatgcttacaaacacttgaaagccttgggccatatctgaaaaca 196 |||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||||| | Sbjct: 9263 cttccaactgtgaaatgatgctcagaaatacttgaaagccttgggccatatctgaaaata 9204 Query: 197 gacaatactcgttcttcgcgtggtacgtcttcagtaa 233 |||| ||||||||||| |||||||| ||||| ||||| Sbjct: 9203 gacagtactcgttctttgcgtggtatgtcttgagtaa 9167 Score = 97.6 bits (49), Expect = 2e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 269 cctgtaattcccgaatcagaggcaaactcccggtgatggaatatggctctacgtatccaa 328 |||||||||||| |||||| |||| |||||| || ||||||||||| || |||| || | Sbjct: 8803 cctgtaattccctaatcaggggcagactcccagtaatggaatatggttccacgtggccga 8744 Query: 329 ctatttcctcagttgctttgcacaatgcttgaaagcc 365 | |||||||||||||||||||| |||||||||||||| Sbjct: 8743 caatttcctcagttgctttgcataatgcttgaaagcc 8707 Score = 46.1 bits (23), Expect = 0.079 Identities = 35/39 (89%) Strand = Plus / Minus Query: 234 accatatccagctgtttgaacatcaaatccttcatcctg 272 |||||| ||||| || ||||||||||| ||||||||||| Sbjct: 8919 accatacccagcagtctgaacatcaaacccttcatcctg 8881
>gb|AY104516.1| Zea mays PCO121857 mRNA sequence Length = 939 Score = 60.0 bits (30), Expect = 5e-06 Identities = 93/112 (83%), Gaps = 3/112 (2%) Strand = Plus / Minus Query: 257 caaatccttcatcctgtaattcccgaatcag-aggcaaactcccggtgatggaatatggc 315 |||||||||| | |||||||||||| || || ||| | |||||||||||||||||||||| Sbjct: 859 caaatccttcgttctgtaattcccggataaggaggtagactcccggtgatggaatatggc 800 Query: 316 t--ctacgtatccaactatttcctcagttgctttgcacaatgcttgaaagcc 365 | | || ||||||||||||| ||||||||||| ||||| ||| |||| Sbjct: 799 tncccnagtggccaactatttccttggttgctttgcataatgcatgatagcc 748
>emb|CR932963.2| Medicago truncatula chromosome 5 clone mth2-115p22, COMPLETE SEQUENCE Length = 133910 Score = 46.1 bits (23), Expect = 0.079 Identities = 62/75 (82%) Strand = Plus / Minus Query: 276 ttcccgaatcagaggcaaactcccggtgatggaatatggctctacgtatccaactatttc 335 ||||||||| |||||||| ||||| || || || | |||| ||| | ||||| ||||| Sbjct: 37079 ttcccgaatgagaggcaagctcccagtaattgagaaaggctttacatggccaacaatttc 37020 Query: 336 ctcagttgctttgca 350 ||||||||||||||| Sbjct: 37019 ctcagttgctttgca 37005 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 tgaacatcaaatccttcatcctgt 273 ||||||||||| |||||||||||| Sbjct: 37181 tgaacatcaaaaccttcatcctgt 37158
>emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on chromosome 13 Contains part of the gene for a novel protein similar to axonemal dynein heavy polypeptide (DNAH), complete sequence Length = 127451 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 ttgggccatatctgaaaacaga 198 |||||||||||||||||||||| Sbjct: 49442 ttgggccatatctgaaaacaga 49463
>gb|AC010276.6|AC010276 Homo sapiens chromosome 5 clone CTC-504A5, complete sequence Length = 207842 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 aacatcaaatccttcatcctg 272 ||||||||||||||||||||| Sbjct: 54918 aacatcaaatccttcatcctg 54938
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 tcctgtaattcccgaatcaga 288 ||||||||||||||||||||| Sbjct: 317268 tcctgtaattcccgaatcaga 317288
>ref|NM_126105.2| Arabidopsis thaliana triacylglycerol lipase AT5G67050 mRNA, complete cds Length = 1488 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 tgtttgaacatcaaatcctt 265 |||||||||||||||||||| Sbjct: 1153 tgtttgaacatcaaatcctt 1134
>ref|NM_117892.4| Arabidopsis thaliana metallopeptidase AT4G17830 mRNA, complete cds Length = 1553 Score = 40.1 bits (20), Expect = 4.9 Identities = 83/104 (79%) Strand = Plus / Minus Query: 247 gtttgaacatcaaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatg 306 ||||| |||||||| ||||||||||| | || || || ||||| ||| | |||||||| Sbjct: 1241 gtttgcacatcaaaaccttcatcctggaggtctcggattagaggtaaagtaccggtgatc 1182 Query: 307 gaatatggctctacgtatccaactatttcctcagttgctttgca 350 || || |||| |||| |||||| | ||| || ||||||||||| Sbjct: 1181 gagtaaggcttcacgtgtccaacaacttcttcggttgctttgca 1138
>gb|AC151846.3| Mus musculus BAC clone RP23-13B8 from chromosome 10, complete sequence Length = 252639 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ttcagtaaaccatatccagc 245 |||||||||||||||||||| Sbjct: 206688 ttcagtaaaccatatccagc 206669
>gb|AC123075.5| Mus musculus BAC clone RP23-181C16 from chromosome 3, complete sequence Length = 198063 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 agctcaaaacactattatta 68 |||||||||||||||||||| Sbjct: 124116 agctcaaaacactattatta 124135
>gb|AC124407.4| Mus musculus BAC clone RP24-389C22 from chromosome 10, complete sequence Length = 157929 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ttcagtaaaccatatccagc 245 |||||||||||||||||||| Sbjct: 110446 ttcagtaaaccatatccagc 110465
>emb|AL606527.6| Human DNA sequence from clone RP11-454G24 on chromosome 1 Contains a alcohol dehydrogenase 5 (class III) chi polypeptide (ADH5) pseudogene, complete sequence Length = 179964 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 aatatgtatctaataaggta 105 |||||||||||||||||||| Sbjct: 125257 aatatgtatctaataaggta 125238
>emb|AL354861.11| Human DNA sequence from clone RP11-180I4 on chromosome 9 Contains an alpha type 7 proteasome subunit (PSMA7) pseudogene, the 3' end of a novel gene, a novel gene and a CpG island, complete sequence Length = 182653 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aaaacactattattagatct 73 |||||||||||||||||||| Sbjct: 120314 aaaacactattattagatct 120295
>gb|AY070021.1| Arabidopsis thaliana putative N-acetylornithine deacetylase (At4g17830) mRNA, complete cds Length = 1354 Score = 40.1 bits (20), Expect = 4.9 Identities = 83/104 (79%) Strand = Plus / Minus Query: 247 gtttgaacatcaaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatg 306 ||||| |||||||| ||||||||||| | || || || ||||| ||| | |||||||| Sbjct: 1205 gtttgcacatcaaaaccttcatcctggaggtctcggattagaggtaaagtaccggtgatc 1146 Query: 307 gaatatggctctacgtatccaactatttcctcagttgctttgca 350 || || |||| |||| |||||| | ||| || ||||||||||| Sbjct: 1145 gagtaaggcttcacgtgtccaacaacttcttcggttgctttgca 1102
>gb|AF360346.1| Arabidopsis thaliana putative N-acetylornithine deacetylase (At4g17830) mRNA, complete cds Length = 1537 Score = 40.1 bits (20), Expect = 4.9 Identities = 83/104 (79%) Strand = Plus / Minus Query: 247 gtttgaacatcaaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatg 306 ||||| |||||||| ||||||||||| | || || || ||||| ||| | |||||||| Sbjct: 1229 gtttgcacatcaaaaccttcatcctggaggtctcggattagaggtaaagtaccggtgatc 1170 Query: 307 gaatatggctctacgtatccaactatttcctcagttgctttgca 350 || || |||| |||| |||||| | ||| || ||||||||||| Sbjct: 1169 gagtaaggcttcacgtgtccaacaacttcttcggttgctttgca 1126
>gb|AC093431.2| Homo sapiens chromosome 1 clone RP11-574N2, complete sequence Length = 164454 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aatatgtatctaataaggta 105 |||||||||||||||||||| Sbjct: 54687 aatatgtatctaataaggta 54706
>dbj|AK080912.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430206K05 product:unclassifiable, full insert sequence Length = 1865 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ttcagtaaaccatatccagc 245 |||||||||||||||||||| Sbjct: 1133 ttcagtaaaccatatccagc 1114
>dbj|AK079204.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530027K12 product:similar to KH TYPE SPLICING REGULATORY PROTEIN KSRP (FRAGMENT) [Mus musculus], full insert sequence Length = 2093 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 agctcaaaacactattatta 68 |||||||||||||||||||| Sbjct: 1253 agctcaaaacactattatta 1234
>emb|BX826950.1|CNS0A4BZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1503 Score = 40.1 bits (20), Expect = 4.9 Identities = 83/104 (79%) Strand = Plus / Minus Query: 247 gtttgaacatcaaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatg 306 ||||| |||||||| ||||||||||| | || || || ||||| ||| | |||||||| Sbjct: 1210 gtttgcacatcaaaaccttcatcctggaggtctcggattagaggtaaagtaccggtgatc 1151 Query: 307 gaatatggctctacgtatccaactatttcctcagttgctttgca 350 || || |||| |||| |||||| | ||| || ||||||||||| Sbjct: 1150 gagtaaggcttcacgtgtccaacaacttcttcggttgctttgca 1107
>gb|AC108202.3| Homo sapiens BAC clone RP11-20M7 from 4, complete sequence Length = 154274 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tttgaacatcaaatccttca 267 |||||||||||||||||||| Sbjct: 76799 tttgaacatcaaatccttca 76780
>emb|BX828519.1|CNS0A2DF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL11ZD08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1577 Score = 40.1 bits (20), Expect = 4.9 Identities = 83/104 (79%) Strand = Plus / Minus Query: 247 gtttgaacatcaaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatg 306 ||||| |||||||| ||||||||||| | || || || ||||| ||| | |||||||| Sbjct: 1290 gtttgcacatcaaaaccttcatcctggaggtctcggattagaggtaaagtaccggtgatc 1231 Query: 307 gaatatggctctacgtatccaactatttcctcagttgctttgca 350 || || |||| |||| |||||| | ||| || ||||||||||| Sbjct: 1230 gagtaaggcttcacgtgtccaacaacttcttcggttgctttgca 1187
>emb|BX830109.1|CNS0A1CJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1489 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 tgtttgaacatcaaatcctt 265 |||||||||||||||||||| Sbjct: 1153 tgtttgaacatcaaatcctt 1134
>gb|AC151828.3| Mus musculus BAC clone RP24-444L19 from chromosome 10, complete sequence Length = 222344 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ttcagtaaaccatatccagc 245 |||||||||||||||||||| Sbjct: 201685 ttcagtaaaccatatccagc 201704
>dbj|AB020742.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21H1 Length = 74342 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 tgtttgaacatcaaatcctt 265 |||||||||||||||||||| Sbjct: 1368 tgtttgaacatcaaatcctt 1387
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tccagctgtttgaacatcaa 259 |||||||||||||||||||| Sbjct: 2703482 tccagctgtttgaacatcaa 2703463
>gb|AC153955.3| Mus musculus 10 BAC RP24-167A12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 154271 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 cctgtaattcccgaatcagaggca 292 ||||||||||| |||||||||||| Sbjct: 113617 cctgtaattccagaatcagaggca 113640 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,279,679 Number of Sequences: 3902068 Number of extensions: 3279679 Number of successful extensions: 57907 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57838 Number of HSP's gapped (non-prelim): 68 length of query: 368 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 346 effective length of database: 17,147,199,772 effective search space: 5932931121112 effective search space used: 5932931121112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)