>gb|AY108366.1| Zea mays PCO145512 mRNA sequence
          Length = 1315

 Score =  133 bits (67), Expect = 4e-28
 Identities = 108/121 (89%), Gaps = 3/121 (2%)
 Strand = Plus / Minus

                                                                       
Query: 256 ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 315
           |||| ||| |||| || ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 989 ctcaaatgatgtagtccgaccactgctgtatgaaggaggtgtggtccatggactcccccg 930

                                                                       
Query: 316 gcatg---tcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgcggtgc 372
           ||||    || |||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 929 gcatcacctcctcgcccttcttcccgccgatcagcctggcggggttccccacggcggtgc 870

            
Query: 373 t 373
           |
Sbjct: 869 t 869

>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase
            IV-1 gene, complete cds
          Length = 15000

 Score =  127 bits (64), Expect = 3e-26
 Identities = 100/112 (89%)
 Strand = Plus / Plus

                                                                        
Query: 256  ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 315
            |||||||| |||| || ||||| ||||| ||||||||||| ||||||||||| || || |
Sbjct: 2245 ctcagatgctgtagtccgaccattgctggatgaaggaggtgtggtccatggattcacccg 2304

                                                                
Query: 316  gcatgtcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgc 367
            ||||||||||||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 2305 gcatgtcgtcgcccttcttcccgccgagcagcctcgccggattccccaccgc 2356

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  127 bits (64), Expect = 3e-26
 Identities = 100/112 (89%)
 Strand = Plus / Minus

                                                                            
Query: 256      ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 315
                |||||||| |||| || ||||| ||||| ||||||||||| ||||||||||| || || |
Sbjct: 30036766 ctcagatgctgtagtccgaccattgctggatgaaggaggtgtggtccatggattcacccg 30036707

                                                                    
Query: 316      gcatgtcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgc 367
                ||||||||||||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 30036706 gcatgtcgtcgcccttcttcccgccgagcagcctcgccggattccccaccgc 30036655

>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0690B02
          Length = 153116

 Score =  127 bits (64), Expect = 3e-26
 Identities = 100/112 (89%)
 Strand = Plus / Minus

                                                                         
Query: 256   ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 315
             |||||||| |||| || ||||| ||||| ||||||||||| ||||||||||| || || |
Sbjct: 32756 ctcagatgctgtagtccgaccattgctggatgaaggaggtgtggtccatggattcacccg 32697

                                                                 
Query: 316   gcatgtcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgc 367
             ||||||||||||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 32696 gcatgtcgtcgcccttcttcccgccgagcagcctcgccggattccccaccgc 32645

>dbj|AK102935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114J02, full
           insert sequence
          Length = 1157

 Score =  127 bits (64), Expect = 3e-26
 Identities = 100/112 (89%)
 Strand = Plus / Minus

                                                                       
Query: 256 ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 315
           |||||||| |||| || ||||| ||||| ||||||||||| ||||||||||| || || |
Sbjct: 894 ctcagatgctgtagtccgaccattgctggatgaaggaggtgtggtccatggattcacccg 835

                                                               
Query: 316 gcatgtcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgc 367
           ||||||||||||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 834 gcatgtcgtcgcccttcttcccgccgagcagcctcgccggattccccaccgc 783

>dbj|AK071186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086D18, full
           insert sequence
          Length = 1961

 Score =  127 bits (64), Expect = 3e-26
 Identities = 100/112 (89%)
 Strand = Plus / Minus

                                                                       
Query: 256 ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 315
           |||||||| |||| || ||||| ||||| ||||||||||| ||||||||||| || || |
Sbjct: 984 ctcagatgctgtagtccgaccattgctggatgaaggaggtgtggtccatggattcacccg 925

                                                               
Query: 316 gcatgtcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgc 367
           ||||||||||||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 924 gcatgtcgtcgcccttcttcccgccgagcagcctcgccggattccccaccgc 873

>ref|NM_191801.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 912

 Score =  125 bits (63), Expect = 1e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                       
Query: 257 tcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctgg 316
           ||||||| |||| || ||||| ||||| ||||||||||| ||||||||||| || || ||
Sbjct: 912 tcagatgctgtagtccgaccattgctggatgaaggaggtgtggtccatggattcacccgg 853

                                                              
Query: 317 catgtcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgc 367
           |||||||||||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 852 catgtcgtcgcccttcttcccgccgagcagcctcgccggattccccaccgc 802

>dbj|AK102699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103K16, full
           insert sequence
          Length = 1188

 Score =  119 bits (60), Expect = 7e-24
 Identities = 99/112 (88%)
 Strand = Plus / Minus

                                                                       
Query: 256 ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 315
           |||||||| |||| || ||||| ||||| |||||||| || ||||||||||| || || |
Sbjct: 914 ctcagatgctgtagtccgaccattgctggatgaaggatgtgtggtccatggattcacccg 855

                                                               
Query: 316 gcatgtcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgc 367
           ||||||||||||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 854 gcatgtcgtcgcccttcttcccgccgagcagcctcgccggattccccaccgc 803

>gb|AF453837.1| Zea mays satase isoform I mRNA, complete cds
          Length = 1162

 Score =  109 bits (55), Expect = 6e-21
 Identities = 105/121 (86%), Gaps = 3/121 (2%)
 Strand = Plus / Minus

                                                                       
Query: 256 ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 315
           |||| ||| |||| || ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 996 ctcaaatgatgtagtccgaccactgctgtatgaaggaggtgtggtccatggactcccccg 937

                                                                       
Query: 316 gcat---gtcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgcggtgc 372
           ||||    || |||||||||||||   |||||||||| |||||||||||||| |||||||
Sbjct: 936 gcatcacctcctcgcccttcttccgcgcgatcagcctggcggggttccccacggcggtgc 877

            
Query: 373 t 373
           |
Sbjct: 876 t 876

>gb|BT008919.1| Triticum aestivum clone wpa1c.pk015.c12:fis, full insert mRNA
            sequence
          Length = 1301

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                        
Query: 255  tctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccct 314
            |||||||||||||| || ||||||||| ||||||||||||| || ||||||||||| || 
Sbjct: 1019 tctcagatggtgtagtcggaccactgccgtatgaaggaggtgtgatccatggactctccg 960

                             
Query: 315  ggcatgtcgtcgccctt 331
            |||||||| ||| ||||
Sbjct: 959  ggcatgtcctcgtcctt 943



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 324 tcgcccttcttcccgccgatcagcctcgcggggttccccaccgcggtgct 373
           ||||||||| |||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 935 tcgcccttcctccctccgatgagcctggcagggttccccaccgccgtgct 886

>gb|AF453836.1| Zea mays satase isoform III mRNA, complete cds
          Length = 1225

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 255 tctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccct 314
           ||||| |||||||| || ||||| ||  |||||||||| || || |||||||||||||||
Sbjct: 979 tctcaaatggtgtagtccgaccattgacgtatgaaggacgtgtgatccatggactcccct 920

                   
Query: 315 ggcatgtc 322
           ||||||||
Sbjct: 919 ggcatgtc 912

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                   
Query: 256     ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatgga 307
               |||| ||||||||||| ||||||| | | |||||||||| ||||||||||||
Sbjct: 5748603 ctcaaatggtgtaatccgaccactccagcatgaaggaggcatggtccatgga 5748654



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 344     cagcctcgcggggttccccaccgc 367
               ||||||||| ||||||||||||||
Sbjct: 5748697 cagcctcgccgggttccccaccgc 5748720

>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1135_F06
          Length = 102230

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 256   ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatgga 307
             |||| ||||||||||| ||||||| | | |||||||||| ||||||||||||
Sbjct: 38117 ctcaaatggtgtaatccgaccactccagcatgaaggaggcatggtccatgga 38168



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 344   cagcctcgcggggttccccaccgc 367
             ||||||||| ||||||||||||||
Sbjct: 38211 cagcctcgccgggttccccaccgc 38234

>ref|XM_464531.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 897

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 261 atggtgtaatctgaccactgctgtatgaaggaggtatggtccatgga 307
           ||||||||||| ||||||| | | |||||||||| ||||||||||||
Sbjct: 893 atggtgtaatccgaccactccagcatgaaggaggcatggtccatgga 847



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 344 cagcctcgcggggttccccaccgc 367
           ||||||||| ||||||||||||||
Sbjct: 804 cagcctcgccgggttccccaccgc 781

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 94      cggcgttgagcacggccatgc 114
               |||||||||||||||||||||
Sbjct: 2836956 cggcgttgagcacggccatgc 2836936

>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 94     cggcgttgagcacggccatgc 114
              |||||||||||||||||||||
Sbjct: 331181 cggcgttgagcacggccatgc 331161

>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 94     cggcgttgagcacggccatgc 114
              |||||||||||||||||||||
Sbjct: 299682 cggcgttgagcacggccatgc 299662

>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 94    cggcgttgagcacggccatgc 114
             |||||||||||||||||||||
Sbjct: 88112 cggcgttgagcacggccatgc 88132

>ref|XM_534573.2| PREDICTED: Canis familiaris similar to a disintegrin and
            metalloproteinase domain 7 (LOC477379), mRNA
          Length = 2678

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 42   acatctcgcaaaattacaggtaca 65
            ||||||| ||||||||||||||||
Sbjct: 1124 acatctctcaaaattacaggtaca 1101

>emb|AL662891.9| Mouse DNA sequence from clone RP23-20N14 on chromosome 11 Contains the
             Psme4 gene for proteasome (prosome, macropain) activator
             subunit 4, the Gpr75 gene for G protein-coupled receptor
             75, a novel pseudogene, a PDZ and LIM domain 1 (elfin)
             (Pdlim1) pseudogene, two novel genes, the 5' end of the
             Asb3 gene for ankyrin repeat and SOCS box-containing
             protein 3, a methyl-CpG binding domain protein 2
             interacting protein (Mbdin) pseudogene and a CpG island,
             complete sequence
          Length = 244971

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   gaaagaaagggacatgactg 199
             ||||||||||||||||||||
Sbjct: 20875 gaaagaaagggacatgactg 20894

>gb|AC113405.2| Homo sapiens chromosome 5 clone RP11-467C9, complete sequence
          Length = 134319

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 217   ttacagaggaggagagtggcatct 240
             |||||||||||||||||| |||||
Sbjct: 64862 ttacagaggaggagagtgccatct 64839

>gb|AC182464.2| Pan troglodytes BAC clone CH251-539C18 from chromosome 20, complete
             sequence
          Length = 162793

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 206   agtattacaggttacagaggagga 229
             |||||||||||| |||||||||||
Sbjct: 60999 agtattacaggtgacagaggagga 61022

>emb|BX649431.16| Zebrafish DNA sequence from clone DKEYP-44B5 in linkage group 14,
             complete sequence
          Length = 185020

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   ggttacagaggaggagagtg 234
             ||||||||||||||||||||
Sbjct: 36345 ggttacagaggaggagagtg 36326

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     tgccggcgttgagcacggcc 110
              ||||||||||||||||||||
Sbjct: 857340 tgccggcgttgagcacggcc 857359

>gb|AC022104.3|AC022104 Homo sapiens chromosome 5 clone CTC-257B12, complete sequence
          Length = 160703

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 217    ttacagaggaggagagtggcatct 240
              |||||||||||||||||| |||||
Sbjct: 154392 ttacagaggaggagagtgccatct 154415


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,625,226
Number of Sequences: 3902068
Number of extensions: 2625226
Number of successful extensions: 48187
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48082
Number of HSP's gapped (non-prelim): 103
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)