ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast60c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF411228.1|AF411228 Hordeum vulgare ascorbate peroxidase mRNA... 359 4e-96
2gb|BT009090.1| Triticum aestivum clone wkm2c.pk0002.f7:fis, full... 204 2e-49
3ref|XM_479627.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-06
4ref|XM_506596.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 6e-06
5dbj|AB053297.1| Oryza sativa (japonica cultivar-group) APXb mRNA... 60 6e-06
6dbj|AK102751.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
7dbj|AK068430.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
8dbj|AK061715.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
9dbj|AB050724.1| Oryza sativa (japonica cultivar-group) APXb mRNA... 60 6e-06
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
11dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
12dbj|D25238.1|RICSS622CC Oryza sativa SS622 mRNA for ascorbate pe... 54 3e-04
13gb|DQ097722.1| Arachis hypogaea cytosolic ascorbate peroxidase m... 52 0.001
14gb|BT019024.1| Zea mays clone Contig527.F mRNA sequence 44 0.33
15emb|AL137857.29| Human DNA sequence from clone RP5-1166H10 on ch... 44 0.33
16emb|Z34934.1|ZMAPXG Z.mays apx gene encoding cytosolic ascorbate... 44 0.33
17gb|AY104492.1| Zea mays PCO104002 mRNA sequence 44 0.33
18ref|NM_202299.1| Arabidopsis thaliana unknown protein AT1G54575 ... 42 1.3
19gb|AY773826.1| Arabidopsis thaliana clone pENTR221-At1g54575 hyp... 42 1.3
20gb|AY735542.1| Arabidopsis thaliana hypothetical protein AT1G545... 42 1.3
21gb|BT015723.1| Arabidopsis thaliana At1g54575 gene, complete cds 42 1.3
22gb|BT015058.1| Arabidopsis thaliana At1g54575 gene, complete cds 42 1.3
23gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, c... 42 1.3
24gb|AC162901.4| Mus musculus BAC clone RP23-417K5 from chromosome... 42 1.3
25dbj|AK221685.1| Arabidopsis thaliana mRNA for hypothetical prote... 42 1.3
26gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsis tha... 42 1.3
27gb|AC019176.4|AC019176 Homo sapiens BAC clone RP11-221H10 from 8... 42 1.3
28emb|BX818219.1|CNS0AE3B Arabidopsis thaliana Full-length cDNA Co... 42 1.3
29emb|BX818269.1|CNS0AB1D Arabidopsis thaliana Full-length cDNA Co... 42 1.3
30emb|BX817787.1|CNS0AAX6 Arabidopsis thaliana Full-length cDNA Co... 42 1.3
31emb|AL136293.5|CNS01DVX Human chromosome 14 DNA sequence BAC C-2... 42 1.3
32gb|AC124491.5| Mus musculus BAC clone RP23-454B2 from chromosome... 42 1.3
33gb|AY831398.2| Dimocarpus longan cytosolic ascorbate peroxidase ... 40 5.2
34gb|AC008835.6| Homo sapiens chromosome 5 clone CTD-2148E3, compl... 40 5.2
35emb|BX120015.12| Zebrafish DNA sequence from clone RP71-3A8 in l... 40 5.2 
>gb|AF411228.1|AF411228 Hordeum vulgare ascorbate peroxidase mRNA, complete cds
          Length = 1138

 Score =  359 bits (181), Expect = 4e-96
 Identities = 184/185 (99%)
 Strand = Plus / Minus

                                                                        
Query: 30   catttcgtcctcgacagggaaaaacaaccggaaaggaactacataacacttagcggttca 89
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1116 catttcgttctcgacagggaaaaacaaccggaaaggaactacataacacttagcggttca 1057

                                                                        
Query: 90   cactacaagcaggtccatcacaagatacgaggcgtcaaaagcaaaacaatgcaacacccc 149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 cactacaagcaggtccatcacaagatacgaggcgtcaaaagcaaaacaatgcaacacccc 997

                                                                        
Query: 150  atcgaccgaccgatctaatccaaatccagacaaacacatgacatggccactgggccgacg 209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996  atcgaccgaccgatctaatccaaatccagacaaacacatgacatggccactgggccgacg 937

                 
Query: 210  acaga 214
            |||||
Sbjct: 936  acaga 932



 Score =  202 bits (102), Expect = 6e-49
 Identities = 102/102 (100%)
 Strand = Plus / Minus

                                                                       
Query: 287 attaccgaccctcaggcgccgatcttgaatcagcagcagccctcagacgcctcgccgaat 346
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 attaccgaccctcaggcgccgatcttgaatcagcagcagccctcagacgcctcgccgaat 818

                                                     
Query: 347 ccaagttcagagagcttgaggtgtgcctcggcgtagtcagca 388
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 ccaagttcagagagcttgaggtgtgcctcggcgtagtcagca 776
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>gb|BT009090.1| Triticum aestivum clone wkm2c.pk0002.f7:fis, full insert mRNA
           sequence
          Length = 973

 Score =  204 bits (103), Expect = 2e-49
 Identities = 152/167 (91%), Gaps = 6/167 (3%)
 Strand = Plus / Minus

                                                                       
Query: 32  tttcgtcctcgacagggaaaaa-----caaccggaaaggaactacataacacttagcggt 86
           ||||||||||||||||||| ||     ||||||||||||||||||||||||||| || ||
Sbjct: 901 tttcgtcctcgacagggaataacaattcaaccggaaaggaactacataacacttggcagt 842

                                                                       
Query: 87  tcacactacaagcaggtccatcacaagatacgaggcgtcaaaagcaaaacaatgcaacac 146
           ||| |||||||||| | ||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 841 tcatactacaagcacgcccatcacaagacacgaggcgtc-aaagcaaaacaatgcaacac 783

                                                          
Query: 147 cccatcgaccgaccgatctaatccaaatccagacaaacacatgacat 193
           |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 782 cccatcgaccgacccatctaatccaagtccagacaaacacatgacat 736



 Score =  107 bits (54), Expect = 3e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                       
Query: 287 attaccgaccctcaggcgccgatcttgaatcagcagcagccctcagacgcctcgccgaat 346
           |||| ||||| ||||||||||| ||||||||||||||||||||||   |||||||| |||
Sbjct: 694 attaacgaccttcaggcgccgagcttgaatcagcagcagccctcaacagcctcgccaaat 635

                                                     
Query: 347 ccaagttcagagagcttgaggtgtgcctcggcgtagtcagca 388
           || | ||| || ||||||||||||||||| ||||||||||||
Sbjct: 634 cccaattcggatagcttgaggtgtgcctcagcgtagtcagca 593
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>ref|XM_479627.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1110

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 344 aatccaagttcagagagcttgaggtgtgcctcggcgta 381
           ||||| |||||||||||||||||||| |||||||||||
Sbjct: 819 aatcccagttcagagagcttgaggtgggcctcggcgta 782
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>ref|XM_506596.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E10.12 mRNA
          Length = 1392

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 344 aatccaagttcagagagcttgaggtgtgcctcggcgta 381
           ||||| |||||||||||||||||||| |||||||||||
Sbjct: 815 aatcccagttcagagagcttgaggtgggcctcggcgta 778
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>dbj|AB053297.1| Oryza sativa (japonica cultivar-group) APXb mRNA for L-ascorbate
           peroxidase, complete cds
          Length = 1160

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 344 aatccaagttcagagagcttgaggtgtgcctcggcgta 381
           ||||| |||||||||||||||||||| |||||||||||
Sbjct: 806 aatcccagttcagagagcttgaggtgggcctcggcgta 769
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>dbj|AK102751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106K23, full
           insert sequence
          Length = 2215

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 344 aatccaagttcagagagcttgaggtgtgcctcggcgta 381
           ||||| |||||||||||||||||||| |||||||||||
Sbjct: 819 aatcccagttcagagagcttgaggtgggcctcggcgta 782
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>dbj|AK068430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156P11, full
           insert sequence
          Length = 1393

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 344 aatccaagttcagagagcttgaggtgtgcctcggcgta 381
           ||||| |||||||||||||||||||| |||||||||||
Sbjct: 815 aatcccagttcagagagcttgaggtgggcctcggcgta 778
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>dbj|AK061715.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H06, full
           insert sequence
          Length = 1110

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 344 aatccaagttcagagagcttgaggtgtgcctcggcgta 381
           ||||| |||||||||||||||||||| |||||||||||
Sbjct: 819 aatcccagttcagagagcttgaggtgggcctcggcgta 782
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>dbj|AB050724.1| Oryza sativa (japonica cultivar-group) APXb mRNA for ascorbate
           peroxidase, complete cds
          Length = 1058

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 344 aatccaagttcagagagcttgaggtgtgcctcggcgta 381
           ||||| |||||||||||||||||||| |||||||||||
Sbjct: 801 aatcccagttcagagagcttgaggtgggcctcggcgta 764
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 350      agttcagagagcttgaggtgtgcctcggcgta 381
                |||||||||||||||||||| |||||||||||
Sbjct: 29530846 agttcagagagcttgaggtgggcctcggcgta 29530877
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>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0627E10
          Length = 163388

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 350   agttcagagagcttgaggtgtgcctcggcgta 381
             |||||||||||||||||||| |||||||||||
Sbjct: 57518 agttcagagagcttgaggtgggcctcggcgta 57549
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>dbj|D25238.1|RICSS622CC Oryza sativa SS622 mRNA for ascorbate peroxidase, partial cds
          Length = 273

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 344 aatccaagttcagagagcttgaggtgtgcctcggcgta 381
           ||||| | |||||||||||||||||| |||||||||||
Sbjct: 140 aatcccanttcagagagcttgaggtgggcctcggcgta 103
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>gb|DQ097722.1| Arachis hypogaea cytosolic ascorbate peroxidase mRNA, complete cds
          Length = 1046

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 347 ccaagttcagagagcttgaggtgtgcctcggcgtagtcagca 388
           ||||| ||||||||||| ||||||||||| ||||| ||||||
Sbjct: 816 ccaagctcagagagcttaaggtgtgcctcagcgtaatcagca 775
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>gb|BT019024.1| Zea mays clone Contig527.F mRNA sequence
          Length = 854

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 359 agcttgaggtgtgcctcggcgtagtcagca 388
           ||||| ||||| ||||||||||||||||||
Sbjct: 608 agcttcaggtgggcctcggcgtagtcagca 579
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>emb|AL137857.29| Human DNA sequence from clone RP5-1166H10 on chromosome 1p33-35.1
             Contains the MATN1 gene for matrilin 1 cartilage matrix
             protein, a novel gene (FLJ46197, FLJ33163), the 3' end of
             the gene for Lysosomal-associated multispanning membrane
             protein-5 (LAPTM5) and a CpG island, complete sequence
          Length = 152042

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 128   aagcaaaacaatgcaacacccc 149
             ||||||||||||||||||||||
Sbjct: 34235 aagcaaaacaatgcaacacccc 34256
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>emb|Z34934.1|ZMAPXG Z.mays apx gene encoding cytosolic ascorbate peroxidase
          Length = 1042

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 359 agcttgaggtgtgcctcggcgtagtcagca 388
           ||||| ||||| ||||||||||||||||||
Sbjct: 796 agcttcaggtgggcctcggcgtagtcagca 767
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>gb|AY104492.1| Zea mays PCO104002 mRNA sequence
          Length = 1052

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 359 agcttgaggtgtgcctcggcgtagtcagca 388
           ||||| ||||| ||||||||||||||||||
Sbjct: 810 agcttcaggtgggcctcggcgtagtcagca 781
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>ref|NM_202299.1| Arabidopsis thaliana unknown protein AT1G54575 mRNA, complete cds
          Length = 638

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 123 gtcaaaagcaaaacaatgcaacacc 147
           |||||||||||||||||| ||||||
Sbjct: 221 gtcaaaagcaaaacaatgaaacacc 245
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>gb|AY773826.1| Arabidopsis thaliana clone pENTR221-At1g54575 hypothetical protein
           (At1g54575) gene, complete cds
          Length = 309

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 123 gtcaaaagcaaaacaatgcaacacc 147
           |||||||||||||||||| ||||||
Sbjct: 188 gtcaaaagcaaaacaatgaaacacc 212
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>gb|AY735542.1| Arabidopsis thaliana hypothetical protein AT1G54575 mRNA, complete
           cds
          Length = 670

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 123 gtcaaaagcaaaacaatgcaacacc 147
           |||||||||||||||||| ||||||
Sbjct: 234 gtcaaaagcaaaacaatgaaacacc 258
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>gb|BT015723.1| Arabidopsis thaliana At1g54575 gene, complete cds
          Length = 309

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 123 gtcaaaagcaaaacaatgcaacacc 147
           |||||||||||||||||| ||||||
Sbjct: 188 gtcaaaagcaaaacaatgaaacacc 212
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>gb|BT015058.1| Arabidopsis thaliana At1g54575 gene, complete cds
          Length = 573

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 123 gtcaaaagcaaaacaatgcaacacc 147
           |||||||||||||||||| ||||||
Sbjct: 198 gtcaaaagcaaaacaatgaaacacc 222
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>gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, complete sequence
          Length = 195506

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 350    agttcagagagcttgaggtgt 370
              |||||||||||||||||||||
Sbjct: 177385 agttcagagagcttgaggtgt 177365
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>gb|AC162901.4| Mus musculus BAC clone RP23-417K5 from chromosome 8, complete sequence
          Length = 205244

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 316    tcagcagcagccctcagacgc 336
              |||||||||||||||||||||
Sbjct: 101495 tcagcagcagccctcagacgc 101515
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>dbj|AK221685.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL14-90-M11
          Length = 654

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 123 gtcaaaagcaaaacaatgcaacacc 147
           |||||||||||||||||| ||||||
Sbjct: 234 gtcaaaagcaaaacaatgaaacacc 258
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>gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 87768

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 123   gtcaaaagcaaaacaatgcaacacc 147
             |||||||||||||||||| ||||||
Sbjct: 15805 gtcaaaagcaaaacaatgaaacacc 15829
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>gb|AC019176.4|AC019176 Homo sapiens BAC clone RP11-221H10 from 8, complete sequence
          Length = 170680

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 123   gtcaaaagcaaaacaatgcaa 143
             |||||||||||||||||||||
Sbjct: 63442 gtcaaaagcaaaacaatgcaa 63462
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>emb|BX818219.1|CNS0AE3B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL67ZF04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 631

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 123 gtcaaaagcaaaacaatgcaacacc 147
           |||||||||||||||||| ||||||
Sbjct: 214 gtcaaaagcaaaacaatgaaacacc 238
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>emb|BX818269.1|CNS0AB1D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL6ZF07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 599

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 123 gtcaaaagcaaaacaatgcaacacc 147
           |||||||||||||||||| ||||||
Sbjct: 205 gtcaaaagcaaaacaatgaaacacc 229
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>emb|BX817787.1|CNS0AAX6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL41ZD08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 630

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 123 gtcaaaagcaaaacaatgcaacacc 147
           |||||||||||||||||| ||||||
Sbjct: 221 gtcaaaagcaaaacaatgaaacacc 245
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>emb|AL136293.5|CNS01DVX Human chromosome 14 DNA sequence BAC C-2555C10 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 226035

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 169   ccaaatccagacaaacacatg 189
             |||||||||||||||||||||
Sbjct: 48820 ccaaatccagacaaacacatg 48800
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>gb|AC124491.5| Mus musculus BAC clone RP23-454B2 from chromosome 8, complete sequence
          Length = 187779

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 316   tcagcagcagccctcagacgc 336
             |||||||||||||||||||||
Sbjct: 33013 tcagcagcagccctcagacgc 32993
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>gb|AY831398.2| Dimocarpus longan cytosolic ascorbate peroxidase mRNA, partial cds
          Length = 868

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 aatccaagttcagagagctt 363
           ||||||||||||||||||||
Sbjct: 622 aatccaagttcagagagctt 603
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>gb|AC008835.6| Homo sapiens chromosome 5 clone CTD-2148E3, complete sequence
          Length = 129046

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tttttttggggggaaccaaa 21
             ||||||||||||||||||||
Sbjct: 51131 tttttttggggggaaccaaa 51112
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>emb|BX120015.12| Zebrafish DNA sequence from clone RP71-3A8 in linkage group 7, complete
              sequence
          Length = 156089

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      tttttttggggggaaccaaa 21
              ||||||||||||||||||||
Sbjct: 154001 tttttttggggggaaccaaa 153982


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,269,963
Number of Sequences: 3902068
Number of extensions: 2269963
Number of successful extensions: 47789
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47731
Number of HSP's gapped (non-prelim): 57
length of query: 388
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 366
effective length of database: 17,147,199,772
effective search space: 6275875116552
effective search space used: 6275875116552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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