>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10,
              complete sequence
          Length = 170681

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                                
Query: 349    gtgagctatgaactcggcaaggtccggccagctcgccgccgtcacgagct 398
              |||||| ||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 162197 gtgagcgatgaactcggcgaggtcaggccagctcgccgccgtcacgagct 162148

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                                  
Query: 349      gtgagctatgaactcggcaaggtccggccagctcgccgccgtcacgagct 398
                |||||| ||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 21638678 gtgagcgatgaactcggcgaggtcaggccagctcgccgccgtcacgagct 21638629

>dbj|AK058631.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C10, full
            insert sequence
          Length = 1357

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                              
Query: 349  gtgagctatgaactcggcaaggtccggccagctcgccgccgtcacgagct 398
            |||||| ||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 1223 gtgagcgatgaactcggcgaggtcaggccagctcgccgccgtcacgagct 1174

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                                  
Query: 349      gtgagctatgaactcggcaaggtccggccagctcgccgccgtcacgagct 398
                |||||| ||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 21948877 gtgagcgatgaactcggcgaggtcaggccagctcgccgccgtcacgagct 21948828

>ref|XM_778266.1| PREDICTED: Strongylocentrotus purpuratus similar to huntingtin
            interacting protein B isoform 2 (LOC578079), mRNA
          Length = 9433

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 297  cattgcatcttcagattcaga 317
            |||||||||||||||||||||
Sbjct: 3416 cattgcatcttcagattcaga 3396

>gb|AC090812.5| Homo sapiens chromosome 18, clone RP11-59J7, complete sequence
          Length = 176873

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 238   ctctgcagagtgtgacagtgctcag 262
             |||||||||||||||||||| ||||
Sbjct: 55231 ctctgcagagtgtgacagtggtcag 55255

>gb|AC015617.8| Homo sapiens, clone RP11-45H23, complete sequence
          Length = 160541

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 238 ctctgcagagtgtgacagtgctcag 262
           |||||||||||||||||||| ||||
Sbjct: 584 ctctgcagagtgtgacagtggtcag 560

>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 368    aggtccggccagctcgccgccgtca 392
              ||||||||||||| |||||||||||
Sbjct: 126919 aggtccggccagcccgccgccgtca 126943

>ref|NM_001035729.1| Arabidopsis thaliana unknown protein AT3G43930 transcript variant
            AT3G43930.2 mRNA, complete cds
          Length = 1708

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 219  ctcttggacaatatctgaac 238
            ||||||||||||||||||||
Sbjct: 1059 ctcttggacaatatctgaac 1078

>ref|NM_114261.2| Arabidopsis thaliana unknown protein AT3G43930 transcript variant
            AT3G43930.1 mRNA, complete cds
          Length = 1706

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 219  ctcttggacaatatctgaac 238
            ||||||||||||||||||||
Sbjct: 1059 ctcttggacaatatctgaac 1078

>gb|AC005600.1| Homo sapiens chromosome 16, P1 clone 109-9G (LANL), complete sequence
          Length = 79586

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 366   caaggtccggccagctcgcc 385
             ||||||||||||||||||||
Sbjct: 33679 caaggtccggccagctcgcc 33660

>gb|AY648337.1| Arabidopsis thaliana hypothetical protein (At3g43930) mRNA, complete
            cds, alternatively spliced
          Length = 1729

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 219  ctcttggacaatatctgaac 238
            ||||||||||||||||||||
Sbjct: 1060 ctcttggacaatatctgaac 1079

>gb|AY648336.1| Arabidopsis thaliana hypothetical protein (At3g43930) mRNA, complete
            cds, alternatively spliced
          Length = 1728

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 219  ctcttggacaatatctgaac 238
            ||||||||||||||||||||
Sbjct: 1142 ctcttggacaatatctgaac 1161

>gb|AY648335.1| Arabidopsis thaliana hypothetical protein (At3g43930) mRNA, complete
            cds
          Length = 1729

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 219  ctcttggacaatatctgaac 238
            ||||||||||||||||||||
Sbjct: 1060 ctcttggacaatatctgaac 1079

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 363    cggcaaggtccggccagctc 382
              ||||||||||||||||||||
Sbjct: 841598 cggcaaggtccggccagctc 841617

>gb|AC093513.3| Homo sapiens chromosome 16 clone CTD-2517G10, complete sequence
          Length = 72483

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 366   caaggtccggccagctcgcc 385
             ||||||||||||||||||||
Sbjct: 34096 caaggtccggccagctcgcc 34115

>emb|AL163975.1|ATT15B3 Arabidopsis thaliana DNA chromosome 3, BAC clone T15B3
          Length = 114656

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   ctcttggacaatatctgaac 238
             ||||||||||||||||||||
Sbjct: 51317 ctcttggacaatatctgaac 51298

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 135     aacagcaccagccgcctcgtccag 158
               |||||||| |||||||||||||||
Sbjct: 2883655 aacagcacaagccgcctcgtccag 2883632

>gb|AC105110.5| Homo sapiens chromosome 18, clone CTD-2301P8, complete sequence
          Length = 95735

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   ggaggagaagatgcattgca 303
             ||||||||||||||||||||
Sbjct: 36832 ggaggagaagatgcattgca 36851

>gb|AC108452.3| Homo sapiens chromosome 18, clone RP11-60G10, complete sequence
          Length = 160769

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   ggaggagaagatgcattgca 303
             ||||||||||||||||||||
Sbjct: 14599 ggaggagaagatgcattgca 14618

>gb|AC009211.5|AC009211 Drosophila melanogaster, chromosome 3R, region 87D11-87E3, BAC clone
            BACR48D15, complete sequence
          Length = 184272

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 208  attaataacagctcttggacaatatctg 235
            ||||| ||||||| ||||||||||||||
Sbjct: 9040 attaagaacagcttttggacaatatctg 9067

>gb|AE004898.1| Pseudomonas aeruginosa PAO1, section 459 of 529 of the complete
            genome
          Length = 10927

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 370  gtccggccagctcgccgccg 389
            ||||||||||||||||||||
Sbjct: 7533 gtccggccagctcgccgccg 7514

>gb|AE003698.3| Drosophila melanogaster chromosome 3R, section 36 of 118 of the complete
              sequence
          Length = 247955

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 208    attaataacagctcttggacaatatctg 235
              ||||| ||||||| ||||||||||||||
Sbjct: 127185 attaagaacagcttttggacaatatctg 127212

>gb|L48522.1|HUMTSC2G06 Homo sapiens tuberin (TSC2) gene, exons 6, 7, and 8
          Length = 1267

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 366  caaggtccggccagctcgcc 385
            ||||||||||||||||||||
Sbjct: 1013 caaggtccggccagctcgcc 994

>emb|AL807762.9| Mouse DNA sequence from clone RP23-48F4 on chromosome 4, complete
              sequence
          Length = 264321

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 228    aatatctgaactctgcagagtgtg 251
              ||||||||||| ||||||||||||
Sbjct: 133802 aatatctgaacactgcagagtgtg 133825


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,156,973
Number of Sequences: 3902068
Number of extensions: 3156973
Number of successful extensions: 58334
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58196
Number of HSP's gapped (non-prelim): 138
length of query: 398
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 376
effective length of database: 17,147,199,772
effective search space: 6447347114272
effective search space used: 6447347114272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)