ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast60b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018402.1| Zea mays clone EL01N0324A07.d mRNA sequence 113 5e-22
2gb|AY110112.1| Zea mays CL29364_1 mRNA sequence 113 5e-22
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
4dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
5dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
6gb|AE000661.1|HUAE000661 Homo sapiens T-cell receptor alpha delt... 46 0.091
7ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus ... 46 0.091
8gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 44 0.36
9ref|XM_474438.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
10ref|XM_419980.1| PREDICTED: Gallus gallus similar to tudor domai... 42 1.4
11emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
13gb|AC009411.2| Homo sapiens BAC clone RP11-342D1 from 2, complet... 42 1.4
14ref|XM_450411.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.6
15gb|AC151913.1| Pan troglodytes chromosome X clone RP43-057B02 ma... 40 5.6
16ref|XM_743319.1| Aspergillus fumigatus Af293 alpha-1,3-glucan sy... 40 5.6
17emb|BX664703.21| Zebrafish DNA sequence from clone DKEYP-74A8 in... 40 5.6
18ref|XM_736306.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 5.6
19emb|AL592298.6| Human DNA sequence from clone RP11-555I23 on chr... 40 5.6
20emb|AL157820.27| Human DNA sequence from clone RP11-8D7 on chrom... 40 5.6
21emb|AL139385.12| Human DNA sequence from clone RP11-90L1 on chro... 40 5.6
22emb|AL034401.1|HS212J10 Human DNA sequence from clone RP1-212J10... 40 5.6
23gb|AC113615.3| Homo sapiens BAC clone RP11-586D19 from 4, comple... 40 5.6
24emb|BX571868.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 5.6
25emb|BX649426.8| Zebrafish DNA sequence from clone DKEYP-82D11, c... 40 5.6
26emb|BX648882.1|HSM809033 Homo sapiens mRNA; cDNA DKFZp686G08243 ... 40 5.6
27dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.6
28gb|AC104120.2| Homo sapiens chromosome 5 clone RP11-404L6, compl... 40 5.6
29dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
30gb|AC110296.3| Homo sapiens BAC clone RP11-120A1 from 4, complet... 40 5.6
31gb|AC154785.2| Mus musculus BAC clone RP23-92M20 from chromosome... 40 5.6
32gb|AC157658.2| Mus musculus BAC clone RP23-331E4 from chromosome... 40 5.6
33dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 5.6
34dbj|AP005788.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
35dbj|AP005739.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
36emb|AL929512.14| Zebrafish DNA sequence from clone CH211-1L10, c... 40 5.6
37emb|BX649191.1|HSM807053 Homo sapiens mRNA; cDNA DKFZp667A2315 (... 40 5.6
38dbj|AK025597.1| Homo sapiens cDNA: FLJ21944 fis, clone HEP04662 40 5.6
39dbj|AK068208.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
40emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.6
41emb|AL935295.16| Zebrafish DNA sequence from clone CH211-260C23 ... 40 5.6
42dbj|AP006243.1| Homo sapiens genomic DNA, chromosome 6, clone:RP... 40 5.6
43gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 5.6
44dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 5.6
45emb|AL670260.10| Mouse DNA sequence from clone RP23-1I17 on chro... 40 5.6 
>gb|BT018402.1| Zea mays clone EL01N0324A07.d mRNA sequence
          Length = 1566

 Score =  113 bits (57), Expect = 5e-22
 Identities = 174/213 (81%)
 Strand = Plus / Minus

                                                                        
Query: 200  tcagcacttcttggcgagggcgctcttggccttgtgccggaagagcacccgcttcctcca 259
            ||||||||||||||||  ||||||||||| |||||||| ||| ||||||  |||| ||| 
Sbjct: 1384 tcagcacttcttggcgcaggcgctcttgggcttgtgcctgaacagcaccttcttcttcct 1325

                                                                        
Query: 260  gcgggtcgcgttctccacggtgatcaccaccttgccggcctccgccgcgcggaacgagtt 319
            | | |  | |||||  ||||||| ||| |||||||| | |||  | | ||||||||||||
Sbjct: 1324 gtgcgaggtgttctggacggtgagcacgaccttgcccggctcgccggtgcggaacgagtt 1265

                                                                        
Query: 320  gcgcaccgcctcctccccggcgcccaccttcctgcccttgctcaccacgatggtgtacgc 379
            ||| ||||||||||| ||||   ||| |||| ||||||| || || | ||||||||| | 
Sbjct: 1264 gcggaccgcctcctcgccggacgccatcttcttgcccttcctgacgatgatggtgtagga 1205

                                             
Query: 380  gccctcgtcggccggcacgaactcctccgtgta 412
            ||||||||| |||||||||||||||||| ||||
Sbjct: 1204 gccctcgtccgccggcacgaactcctccttgta 1172
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>gb|AY110112.1| Zea mays CL29364_1 mRNA sequence
          Length = 650

 Score =  113 bits (57), Expect = 5e-22
 Identities = 174/213 (81%)
 Strand = Plus / Plus

                                                                       
Query: 200 tcagcacttcttggcgagggcgctcttggccttgtgccggaagagcacccgcttcctcca 259
           ||||||||||||||||  |||||||||||||||| ||| ||| ||||||  |||| ||| 
Sbjct: 162 tcagcacttcttggcgcaggcgctcttggccttgggcctgaacagcaccttcttcttcct 221

                                                                       
Query: 260 gcgggtcgcgttctccacggtgatcaccaccttgccggcctccgccgcgcggaacgagtt 319
           | | |  | |||||  ||||||| ||| |||||||| | |||  | | ||||||||||||
Sbjct: 222 gtgcgaggggttctggacggtgagcacgaccttgcccggctcgccggtgcggaacgagtt 281

                                                                       
Query: 320 gcgcaccgcctcctccccggcgcccaccttcctgcccttgctcaccacgatggtgtacgc 379
           ||| ||||||||||| ||||   ||| |||| ||||||| || || | ||||||||| | 
Sbjct: 282 gcggaccgcctcctcgccggacgccatcttcttgcccttcctgacgatgatggtgtagga 341

                                            
Query: 380 gccctcgtcggccggcacgaactcctccgtgta 412
           ||||||||| |||||||||||||||||| ||||
Sbjct: 342 gccctcgtccgccggcacgaactcctccttgta 374
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 169/213 (79%)
 Strand = Plus / Minus

                                                                            
Query: 200      tcagcacttcttggcgagggcgctcttggccttgtgccggaagagcacccgcttcctcca 259
                |||||||| ||||||   |||||||||||||||||||| ||| ||||||  |||| ||| 
Sbjct: 27493591 tcagcactccttggcacaggcgctcttggccttgtgcctgaacagcaccttcttcttcct 27493532

                                                                            
Query: 260      gcgggtcgcgttctccacggtgatcaccaccttgccggcctccgccgcgcggaacgagtt 319
                | | |||  |||||| |||||||  |||||||| || | |||  | ||||||||||||||
Sbjct: 27493531 gtgcgtcaggttctcgacggtgaggaccaccttccccggctcgccggcgcggaacgagtt 27493472

                                                                            
Query: 320      gcgcaccgcctcctccccggcgcccaccttcctgcccttgctcaccacgatggtgtacgc 379
                ||| |||||| |||||   |  |||| |||| | |||||  | || | || |||||||| 
Sbjct: 27493471 gcggaccgccgcctccgacgaccccatcttcttccccttcttgacgatgacggtgtacga 27493412

                                                 
Query: 380      gccctcgtcggccggcacgaactcctccgtgta 412
                |||||| |||  |||||||||||||||| ||||
Sbjct: 27493411 gccctcctcgctcggcacgaactcctccttgta 27493379
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>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0032M14
          Length = 146636

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 169/213 (79%)
 Strand = Plus / Minus

                                                                         
Query: 200   tcagcacttcttggcgagggcgctcttggccttgtgccggaagagcacccgcttcctcca 259
             |||||||| ||||||   |||||||||||||||||||| ||| ||||||  |||| ||| 
Sbjct: 63149 tcagcactccttggcacaggcgctcttggccttgtgcctgaacagcaccttcttcttcct 63090

                                                                         
Query: 260   gcgggtcgcgttctccacggtgatcaccaccttgccggcctccgccgcgcggaacgagtt 319
             | | |||  |||||| |||||||  |||||||| || | |||  | ||||||||||||||
Sbjct: 63089 gtgcgtcaggttctcgacggtgaggaccaccttccccggctcgccggcgcggaacgagtt 63030

                                                                         
Query: 320   gcgcaccgcctcctccccggcgcccaccttcctgcccttgctcaccacgatggtgtacgc 379
             ||| |||||| |||||   |  |||| |||| | |||||  | || | || |||||||| 
Sbjct: 63029 gcggaccgccgcctccgacgaccccatcttcttccccttcttgacgatgacggtgtacga 62970

                                              
Query: 380   gccctcgtcggccggcacgaactcctccgtgta 412
             |||||| |||  |||||||||||||||| ||||
Sbjct: 62969 gccctcctcgctcggcacgaactcctccttgta 62937
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>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0485A07
          Length = 166397

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 169/213 (79%)
 Strand = Plus / Minus

                                                                          
Query: 200    tcagcacttcttggcgagggcgctcttggccttgtgccggaagagcacccgcttcctcca 259
              |||||||| ||||||   |||||||||||||||||||| ||| ||||||  |||| ||| 
Sbjct: 112660 tcagcactccttggcacaggcgctcttggccttgtgcctgaacagcaccttcttcttcct 112601

                                                                          
Query: 260    gcgggtcgcgttctccacggtgatcaccaccttgccggcctccgccgcgcggaacgagtt 319
              | | |||  |||||| |||||||  |||||||| || | |||  | ||||||||||||||
Sbjct: 112600 gtgcgtcaggttctcgacggtgaggaccaccttccccggctcgccggcgcggaacgagtt 112541

                                                                          
Query: 320    gcgcaccgcctcctccccggcgcccaccttcctgcccttgctcaccacgatggtgtacgc 379
              ||| |||||| |||||   |  |||| |||| | |||||  | || | || |||||||| 
Sbjct: 112540 gcggaccgccgcctccgacgaccccatcttcttccccttcttgacgatgacggtgtacga 112481

                                               
Query: 380    gccctcgtcggccggcacgaactcctccgtgta 412
              |||||| |||  |||||||||||||||| ||||
Sbjct: 112480 gccctcctcgctcggcacgaactcctccttgta 112448
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>gb|AE000661.1|HUAE000661 Homo sapiens T-cell receptor alpha delta locus from bases 752679 to
              1000555 (section 4 of 5) of the Complete Nucleotide
              Sequence
          Length = 247877

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 168    tctcagcttccaaagaatctgcc 190
              |||||||||||||||||||||||
Sbjct: 125151 tctcagcttccaaagaatctgcc 125173
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>ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus (TCRA/TCRD) on chromosome
              14
          Length = 1071646

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 168    tctcagcttccaaagaatctgcc 190
              |||||||||||||||||||||||
Sbjct: 877829 tctcagcttccaaagaatctgcc 877851
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 274     ccacggtgatcaccaccttgcc 295
               ||||||||||||||||||||||
Sbjct: 3941479 ccacggtgatcaccaccttgcc 3941458
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>ref|XM_474438.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1947

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 187  tgcccccaaatcttcagcacttctt 211
            ||||||||| |||||||||||||||
Sbjct: 1620 tgcccccaagtcttcagcacttctt 1644
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>ref|XM_419980.1| PREDICTED: Gallus gallus similar to tudor domain containing 6 protein
            (LOC421968), mRNA
          Length = 4311

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 18   tatatttctcacataaataat 38
            |||||||||||||||||||||
Sbjct: 2323 tatatttctcacataaataat 2343
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>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12,
              complete sequence
          Length = 144670

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 187    tgcccccaaatcttcagcacttctt 211
              ||||||||| |||||||||||||||
Sbjct: 117104 tgcccccaagtcttcagcacttctt 117080
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 187      tgcccccaaatcttcagcacttctt 211
                ||||||||| |||||||||||||||
Sbjct: 35180592 tgcccccaagtcttcagcacttctt 35180568
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>gb|AC009411.2| Homo sapiens BAC clone RP11-342D1 from 2, complete sequence
          Length = 170804

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 21    atttctcacataaataataataatt 45
             |||||||||||| ||||||||||||
Sbjct: 10012 atttctcacatatataataataatt 10036
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>ref|XM_450411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1182

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 191  cccaaatcttcagcacttct 210
            ||||||||||||||||||||
Sbjct: 1113 cccaaatcttcagcacttct 1094
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>gb|AC151913.1| Pan troglodytes chromosome X clone RP43-057B02 map human ortholog q26.2,
              complete sequence
          Length = 173886

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     tcacataaataataataatt 45
              ||||||||||||||||||||
Sbjct: 108161 tcacataaataataataatt 108142
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>ref|XM_743319.1| Aspergillus fumigatus Af293 alpha-1,3-glucan synthase (Afu3g00910)
            partial mRNA
          Length = 7263

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 248  ccgcttcctccagcgggtcg 267
            ||||||||||||||||||||
Sbjct: 6281 ccgcttcctccagcgggtcg 6300
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>emb|BX664703.21| Zebrafish DNA sequence from clone DKEYP-74A8 in linkage group 6, complete
              sequence
          Length = 193958

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     ataaataataataattccac 49
              ||||||||||||||||||||
Sbjct: 145412 ataaataataataattccac 145431
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>ref|XM_736306.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000920.01.0)
            partial mRNA
          Length = 1383

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   ataaataataataattccac 49
            ||||||||||||||||||||
Sbjct: 1087 ataaataataataattccac 1106
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>emb|AL592298.6| Human DNA sequence from clone RP11-555I23 on chromosome 6, complete
             sequence
          Length = 48600

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    cataaataataataattcca 48
             ||||||||||||||||||||
Sbjct: 31611 cataaataataataattcca 31630
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>emb|AL157820.27| Human DNA sequence from clone RP11-8D7 on chromosome 13 Contains the
            5' end of a novel gene, the  ING1 gene for Inhibitor of
            growth family member 1 and three CpG islands, complete
            sequence
          Length = 97465

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 183  aatctgcccccaaatcttca 202
            ||||||||||||||||||||
Sbjct: 1789 aatctgcccccaaatcttca 1808
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>emb|AL139385.12| Human DNA sequence from clone RP11-90L1 on chromosome 13 Contains the 3'
              end of the COL4A2 gene for collagen type IV alpha 2, the
              RAB20 gene for a RAS oncogene family member, a novel gene
              (FLJ10769 FLJ25038 FLJ14198), the 5' end of a novel gene
              (FLJ12118) and three CpG islands, complete sequence
          Length = 177392

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    aatctgcccccaaatcttca 202
              ||||||||||||||||||||
Sbjct: 177181 aatctgcccccaaatcttca 177200
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>emb|AL034401.1|HS212J10 Human DNA sequence from clone RP1-212J10 on chromosome Xq25-26.3
             Contains ESTs and a GSS, complete sequence
          Length = 30208

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    tcacataaataataataatt 45
             ||||||||||||||||||||
Sbjct: 13680 tcacataaataataataatt 13661
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>gb|AC113615.3| Homo sapiens BAC clone RP11-586D19 from 4, complete sequence
          Length = 164043

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    gcctcctccccggcgcccac 346
              ||||||||||||||||||||
Sbjct: 123143 gcctcctccccggcgcccac 123162
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>emb|BX571868.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              10/17
          Length = 345829

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     tccttatatttctcacataa 33
              ||||||||||||||||||||
Sbjct: 330100 tccttatatttctcacataa 330081
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>emb|BX649426.8| Zebrafish DNA sequence from clone DKEYP-82D11, complete sequence
          Length = 209340

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     cacataaataataataattc 46
              ||||||||||||||||||||
Sbjct: 207186 cacataaataataataattc 207167
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>emb|BX648882.1|HSM809033 Homo sapiens mRNA; cDNA DKFZp686G08243 (from clone DKFZp686G08243)
          Length = 4746

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  aatctgcccccaaatcttca 202
            ||||||||||||||||||||
Sbjct: 3432 aatctgcccccaaatcttca 3413
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 276     acggtgatcaccaccttgccggcc 299
               |||||||||||| |||||||||||
Sbjct: 1538127 acggtgatcacctccttgccggcc 1538150
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>gb|AC104120.2| Homo sapiens chromosome 5 clone RP11-404L6, complete sequence
          Length = 123372

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   aaagaatctgcccccaaatc 198
             ||||||||||||||||||||
Sbjct: 86555 aaagaatctgcccccaaatc 86536
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 191     cccaaatcttcagcacttct 210
               ||||||||||||||||||||
Sbjct: 5341153 cccaaatcttcagcacttct 5341172
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>gb|AC110296.3| Homo sapiens BAC clone RP11-120A1 from 4, complete sequence
          Length = 132626

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 110   acaaaagaatggaatgaatgtaga 133
             ||||||||||||||| ||||||||
Sbjct: 49713 acaaaagaatggaataaatgtaga 49690
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>gb|AC154785.2| Mus musculus BAC clone RP23-92M20 from chromosome 12, complete sequence
          Length = 231183

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    aaagaatggaatgaatgtag 132
              ||||||||||||||||||||
Sbjct: 195646 aaagaatggaatgaatgtag 195627
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>gb|AC157658.2| Mus musculus BAC clone RP23-331E4 from chromosome 12, complete sequence
          Length = 203717

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   aaagaatggaatgaatgtag 132
             ||||||||||||||||||||
Sbjct: 26600 aaagaatggaatgaatgtag 26581
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    ttgcgcaccgcctcctcccc 337
              ||||||||||||||||||||
Sbjct: 124852 ttgcgcaccgcctcctcccc 124833
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>dbj|AP005788.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0515A04
          Length = 146160

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   cccaaatcttcagcacttct 210
             ||||||||||||||||||||
Sbjct: 24129 cccaaatcttcagcacttct 24148
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>dbj|AP005739.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0012A04
          Length = 150317

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 191    cccaaatcttcagcacttct 210
              ||||||||||||||||||||
Sbjct: 137866 cccaaatcttcagcacttct 137885
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>emb|AL929512.14| Zebrafish DNA sequence from clone CH211-1L10, complete sequence
          Length = 197232

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    ataaataataataattccac 49
             ||||||||||||||||||||
Sbjct: 89157 ataaataataataattccac 89138
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>emb|BX649191.1|HSM807053 Homo sapiens mRNA; cDNA DKFZp667A2315 (from clone DKFZp667A2315)
          Length = 2827

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 183 aatctgcccccaaatcttca 202
           ||||||||||||||||||||
Sbjct: 150 aatctgcccccaaatcttca 131
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>dbj|AK025597.1| Homo sapiens cDNA: FLJ21944 fis, clone HEP04662
          Length = 2099

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 26   tcacataaataataataatt 45
            ||||||||||||||||||||
Sbjct: 1084 tcacataaataataataatt 1103
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>dbj|AK068208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149O20, full
            insert sequence
          Length = 1181

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 191  cccaaatcttcagcacttct 210
            ||||||||||||||||||||
Sbjct: 1112 cccaaatcttcagcacttct 1093
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 379     cgccctcgtcggccggcacg 398
               ||||||||||||||||||||
Sbjct: 5060371 cgccctcgtcggccggcacg 5060390
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>emb|AL935295.16| Zebrafish DNA sequence from clone CH211-260C23 in linkage group 18,
             complete sequence
          Length = 92348

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    cacataaataataataattc 46
             ||||||||||||||||||||
Sbjct: 33942 cacataaataataataattc 33961
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>dbj|AP006243.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-188I7, complete
              sequence
          Length = 163233

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     cataaataataataattcca 48
              ||||||||||||||||||||
Sbjct: 148181 cataaataataataattcca 148200
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 318     ttgcgcaccgcctcctcccc 337
               ||||||||||||||||||||
Sbjct: 1773056 ttgcgcaccgcctcctcccc 1773075
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    gcgggtcgcgttctccacgg 279
              ||||||||||||||||||||
Sbjct: 813838 gcgggtcgcgttctccacgg 813857
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>emb|AL670260.10| Mouse DNA sequence from clone RP23-1I17 on chromosome 4, complete
             sequence
          Length = 147052

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    tcacataaataataataatt 45
             ||||||||||||||||||||
Sbjct: 53947 tcacataaataataataatt 53928


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,994,337
Number of Sequences: 3902068
Number of extensions: 4994337
Number of successful extensions: 130531
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129950
Number of HSP's gapped (non-prelim): 578
length of query: 417
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 395
effective length of database: 17,147,199,772
effective search space: 6773143909940
effective search space used: 6773143909940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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