| Clone Name | rbast60a09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 107 bits (54), Expect = 3e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 295 ttgattttctagccaggaagatcttgcaggagagtcatttgttttgtttgcttcagtcca 354 ||||||||||||||| |||||||||| |||| |||| |||| |||| | |||| || Sbjct: 11780549 ttgattttctagccaagaagatcttgtcggagtctcatctgttctgttagtttcaaaccg 11780490 Query: 355 agaaaatctgcgtaatctgttaaccttcagccgaattgagggcacctttcgagctatg 412 ||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||||||| Sbjct: 11780489 agaaaatcttcgtaatctgttcaccttcaaccgaattgagggcgcctttcgagctatg 11780432
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 107 bits (54), Expect = 3e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 295 ttgattttctagccaggaagatcttgcaggagagtcatttgttttgtttgcttcagtcca 354 ||||||||||||||| |||||||||| |||| |||| |||| |||| | |||| || Sbjct: 11777312 ttgattttctagccaagaagatcttgtcggagtctcatctgttctgttagtttcaaaccg 11777253 Query: 355 agaaaatctgcgtaatctgttaaccttcagccgaattgagggcacctttcgagctatg 412 ||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||||||| Sbjct: 11777252 agaaaatcttcgtaatctgttcaccttcaaccgaattgagggcgcctttcgagctatg 11777195
>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0035J18, from chromsome 3, complete sequence Length = 162711 Score = 107 bits (54), Expect = 3e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 295 ttgattttctagccaggaagatcttgcaggagagtcatttgttttgtttgcttcagtcca 354 ||||||||||||||| |||||||||| |||| |||| |||| |||| | |||| || Sbjct: 130104 ttgattttctagccaagaagatcttgtcggagtctcatctgttctgttagtttcaaaccg 130163 Query: 355 agaaaatctgcgtaatctgttaaccttcagccgaattgagggcacctttcgagctatg 412 ||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||||||| Sbjct: 130164 agaaaatcttcgtaatctgttcaccttcaaccgaattgagggcgcctttcgagctatg 130221
>dbj|AK121618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044K12, full insert sequence Length = 1870 Score = 107 bits (54), Expect = 3e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 295 ttgattttctagccaggaagatcttgcaggagagtcatttgttttgtttgcttcagtcca 354 ||||||||||||||| |||||||||| |||| |||| |||| |||| | |||| || Sbjct: 1555 ttgattttctagccaagaagatcttgtcggagtctcatctgttctgttagtttcaaaccg 1496 Query: 355 agaaaatctgcgtaatctgttaaccttcagccgaattgagggcacctttcgagctatg 412 ||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||||||| Sbjct: 1495 agaaaatcttcgtaatctgttcaccttcaaccgaattgagggcgcctttcgagctatg 1438
>emb|BX908733.14| Zebrafish DNA sequence from clone CH211-190N7 in linkage group 22, complete sequence Length = 153031 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 200 tttgaggttcaagctaagcttcactatg 227 |||||| ||||||||||||||||||||| Sbjct: 132014 tttgagtttcaagctaagcttcactatg 132041
>gb|AC091626.2| Danio rerio clone 101C7, complete sequence Length = 75015 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttatt 55 ||||||||||||||||||||| Sbjct: 21586 attctgatacaaaatgttatt 21606
>emb|AL356600.13| Human DNA sequence from clone RP5-974J14 on chromosome 1p31.2-32.1 Contains part of the NEGR1 gene for neuronal growth regulator 1 and part of a novel gene, complete sequence Length = 131457 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 gtcatttgttttgtttgcttc 348 ||||||||||||||||||||| Sbjct: 28317 gtcatttgttttgtttgcttc 28297
>emb|BX927072.10| Zebrafish DNA sequence from clone CH211-227D19 in linkage group 18, complete sequence Length = 157662 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 gagtcatttgttttgtttgct 346 ||||||||||||||||||||| Sbjct: 148903 gagtcatttgttttgtttgct 148883
>emb|AL833785.5| Mouse DNA sequence from clone RP23-191H7 on chromosome X, complete sequence Length = 146948 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 aatatacagattctgatacaaaatgttat 54 |||| ||||||||||||||||||| |||| Sbjct: 48040 aatagacagattctgatacaaaatcttat 48068
>ref|NM_001030956.1| Gallus gallus F-box protein 32 (FBXO32), mRNA Length = 4577 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 gaaaaccagctgggatagtt 272 |||||||||||||||||||| Sbjct: 2750 gaaaaccagctgggatagtt 2769
>ref|XM_657229.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4717.2), mRNA Length = 1191 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccaaaatcaacgagcttgat 299 |||||||||||||||||||| Sbjct: 674 ccaaaatcaacgagcttgat 655
>emb|BX322603.16| Zebrafish DNA sequence from clone DKEY-269I1 in linkage group 12, complete sequence Length = 191741 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 53674 attctgatacaaaatgttat 53655 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 19510 attctgatacaaaatgttat 19491
>emb|CR318646.27| Zebrafish DNA sequence from clone DKEY-83F18 in linkage group 22, complete sequence Length = 224271 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 207722 attctgatacaaaatgttat 207703
>emb|CR387998.9| Zebrafish DNA sequence from clone DKEY-29H15 in linkage group 1, complete sequence Length = 128837 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 87727 attctgatacaaaatgttat 87746
>emb|CR762383.11| Zebrafish DNA sequence from clone DKEY-28M7 in linkage group 6, complete sequence Length = 101572 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 580 attctgatacaaaatgttat 599
>emb|CR388412.9| Zebrafish DNA sequence from clone CH211-69G13 in linkage group 5, complete sequence Length = 158289 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 76068 attctgatacaaaatgttat 76087
>emb|CR847845.5| Zebrafish DNA sequence from clone DKEY-124I15 in linkage group 14, complete sequence Length = 26956 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 3304 attctgatacaaaatgttat 3323
>emb|CR536619.20| Zebrafish DNA sequence from clone CH211-194H19 in linkage group 16, complete sequence Length = 179375 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 63663 attctgatacaaaatgttat 63644
>emb|CR388124.15| Zebrafish DNA sequence from clone CH211-72C8 in linkage group 15, complete sequence Length = 173535 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 99422 attctgatacaaaatgttat 99403
>gb|AC124725.3| Mus musculus BAC clone RP23-459F16 from chromosome 2, complete sequence Length = 168983 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 aggactgaaaaccagctggg 266 |||||||||||||||||||| Sbjct: 20999 aggactgaaaaccagctggg 21018
>emb|CR555294.10| Zebrafish DNA sequence from clone CH211-169P4 in linkage group 19, complete sequence Length = 142042 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 129495 attctgatacaaaatgttat 129514
>gb|AC109611.24| Mus musculus strain C57BL/6J clone rp23-342n8 map 5, complete sequence Length = 198992 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 aggactgaaaaccagctggg 266 |||||||||||||||||||| Sbjct: 39796 aggactgaaaaccagctggg 39777
>emb|CR394544.15| Zebrafish DNA sequence from clone DKEY-117I6 in linkage group 7, complete sequence Length = 194826 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 cacattttcgatgaaaattggagg 101 |||||||||||||| ||||||||| Sbjct: 87540 cacattttcgatgataattggagg 87563
>emb|BX640465.7| Zebrafish DNA sequence from clone CH211-198B21 in linkage group 9, complete sequence Length = 214459 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 87513 attctgatacaaaatgttat 87532
>emb|CR392362.23| Zebrafish DNA sequence from clone DKEY-5B19 in linkage group 8, complete sequence Length = 114516 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 56244 attctgatacaaaatgttat 56225
>emb|CR450809.6| Zebrafish DNA sequence from clone CH211-195I6 in linkage group 2, complete sequence Length = 206746 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 134511 attctgatacaaaatgttat 134530
>emb|CR391937.10| Zebrafish DNA sequence from clone CH211-175G6 in linkage group 16, complete sequence Length = 224481 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 19333 attctgatacaaaatgttat 19314
>emb|BX927334.17| Zebrafish DNA sequence from clone CH211-112H5 in linkage group 21, complete sequence Length = 183608 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 143652 attctgatacaaaatgttat 143671
>emb|CR293504.11| Zebrafish DNA sequence from clone CH211-147G3 in linkage group 10, complete sequence Length = 165086 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 93117 attctgatacaaaatgttat 93098
>emb|CR388143.6| Zebrafish DNA sequence from clone DKEY-189O20 in linkage group 21, complete sequence Length = 243457 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 174100 attctgatacaaaatgttat 174119
>emb|BX649442.7| Zebrafish DNA sequence from clone DKEY-265J8 in linkage group 9, complete sequence Length = 176456 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 77666 attctgatacaaaatgttat 77647
>emb|AJ721108.1| Gallus gallus mRNA for hypothetical protein, clone 35f9 Length = 4577 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 gaaaaccagctgggatagtt 272 |||||||||||||||||||| Sbjct: 2750 gaaaaccagctgggatagtt 2769
>emb|BX510946.18| Zebrafish DNA sequence from clone CH211-9F9 in linkage group 13, complete sequence Length = 103700 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 99936 attctgatacaaaatgttat 99917
>emb|BX897663.8| Zebrafish DNA sequence from clone CH211-181P22 in linkage group 18, complete sequence Length = 21597 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 14269 attctgatacaaaatgttat 14250
>emb|CR735112.10| Zebrafish DNA sequence from clone CH211-222C11 in linkage group 5, complete sequence Length = 156543 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 40974 attctgatacaaaatgttat 40993
>emb|CR354596.12| Zebrafish DNA sequence from clone CH211-117K14 in linkage group 23, complete sequence Length = 172749 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 32359 attctgatacaaaatgttat 32340
>emb|CR385022.10| Zebrafish DNA sequence from clone CH211-63C12 in linkage group 23, complete sequence Length = 163551 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 28780 attctgatacaaaatgttat 28799
>emb|BX530033.6| Zebrafish DNA sequence from clone CH211-209F14 in linkage group 9, complete sequence Length = 221265 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 138448 attctgatacaaaatgttat 138467
>emb|CR762498.10| Zebrafish DNA sequence from clone DKEY-4J1 in linkage group 13, complete sequence Length = 169361 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 91230 attctgatacaaaatgttat 91211
>emb|CR382340.7| Zebrafish DNA sequence from clone DKEY-151G10 in linkage group 23, complete sequence Length = 158509 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 157818 attctgatacaaaatgttat 157799
>gb|AC159546.4| Mus musculus 6 BAC RP23-450B23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192227 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 tgttattgtccctaatctac 68 |||||||||||||||||||| Sbjct: 19551 tgttattgtccctaatctac 19570
>emb|CR388098.7| Zebrafish DNA sequence from clone DKEY-12J14 in linkage group 13, complete sequence Length = 192818 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 179418 attctgatacaaaatgttat 179399
>emb|BX511213.5| Zebrafish DNA sequence from clone CH211-232G2 in linkage group 21, complete sequence Length = 161052 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 7873 attctgatacaaaatgttat 7892
>emb|BX470262.7| Zebrafish DNA sequence from clone CH211-120K20 in linkage group 14, complete sequence Length = 164673 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 68424 attctgatacaaaatgttat 68405
>emb|BX548050.11| Zebrafish DNA sequence from clone DKEY-267D18 in linkage group 10, complete sequence Length = 208578 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 93335 attctgatacaaaatgttat 93316
>emb|BX323858.12| Zebrafish DNA sequence from clone DKEY-102F10 in linkage group 14, complete sequence Length = 184463 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 160411 attctgatacaaaatgttat 160392
>emb|BX323037.10| Zebrafish DNA sequence from clone DKEYP-8B6 in linkage group 24, complete sequence Length = 173818 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 153875 attctgatacaaaatgttat 153856
>emb|BX000689.17| Zebrafish DNA sequence from clone DKEY-79M5 in linkage group 8, complete sequence Length = 143526 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 103820 attctgatacaaaatgttat 103801
>emb|BX465197.8| Zebrafish DNA sequence from clone DKEY-184E24 in linkage group 14, complete sequence Length = 101530 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 77107 attctgatacaaaatgttat 77126
>emb|BX296542.12| Zebrafish DNA sequence from clone CH211-278C10 in linkage group 9, complete sequence Length = 174884 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 40883 attctgatacaaaatgttat 40902
>emb|BX510366.5| Zebrafish DNA sequence from clone DKEY-189P24 in linkage group 5, complete sequence Length = 179350 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 74592 attctgatacaaaatgttat 74611
>emb|BX465840.13| Zebrafish DNA sequence from clone DKEY-239J18 in linkage group 12, complete sequence Length = 108855 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 12855 attctgatacaaaatgttat 12836
>emb|BX682531.11| Zebrafish DNA sequence from clone CH211-12C17 in linkage group 23, complete sequence Length = 171113 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 21739 attctgatacaaaatgttat 21758
>dbj|AK081474.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130019O12 product:unclassifiable, full insert sequence Length = 2980 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 aggactgaaaaccagctggg 266 |||||||||||||||||||| Sbjct: 1726 aggactgaaaaccagctggg 1745
>emb|BX323810.8| Zebrafish DNA sequence from clone CH211-153K16 in linkage group 14, complete sequence Length = 166625 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 24672 attctgatacaaaatgttat 24653
>emb|BX548049.9| Zebrafish DNA sequence from clone DKEY-217J16 in linkage group 25, complete sequence Length = 175348 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 144065 attctgatacaaaatgttat 144046
>emb|AL954308.12| Zebrafish DNA sequence from clone DKEY-13J15 in linkage group 4, complete sequence Length = 223608 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 86047 attctgatacaaaatgttat 86066
>gb|AC158605.5| Mus musculus BAC RP24-406I15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172269 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 aggactgaaaaccagctggg 266 |||||||||||||||||||| Sbjct: 3479 aggactgaaaaccagctggg 3460
>emb|BX000444.11| Zebrafish DNA sequence from clone RP71-31C2 in linkage group 9, complete sequence Length = 128377 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 43518 attctgatacaaaatgttat 43537
>emb|BX119966.7| Zebrafish DNA sequence from clone CH211-266N15, complete sequence Length = 182813 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 cacattttcgatgaaaattggagg 101 |||||||||||||| ||||||||| Sbjct: 87800 cacattttcgatgataattggagg 87777
>emb|BX088718.7| Zebrafish DNA sequence from clone DKEY-185E18, complete sequence Length = 192836 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 118076 attctgatacaaaatgttat 118057
>emb|BX072573.5| Zebrafish DNA sequence from clone DKEY-16I6, complete sequence Length = 207797 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 42018 attctgatacaaaatgttat 42037
>gb|AC153371.7| Mus musculus 6 BAC RP23-304H3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206412 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 tgttattgtccctaatctac 68 |||||||||||||||||||| Sbjct: 105997 tgttattgtccctaatctac 106016
>emb|BX004867.7| Zebrafish DNA sequence from clone CH211-159K2 in linkage group 14, complete sequence Length = 160087 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 12744 attctgatacaaaatgttat 12725
>emb|BX296535.7| Zebrafish DNA sequence from clone CH211-234I2, complete sequence Length = 163120 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 88345 attctgatacaaaatgttat 88364
>emb|AL929090.4| Zebrafish DNA sequence from clone CH211-14A14, complete sequence Length = 178077 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 146810 attctgatacaaaatgttat 146791
>emb|BX936406.24| Zebrafish DNA sequence from clone DKEY-13K17 in linkage group 17, complete sequence Length = 183483 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 31815 attctgatacaaaatgttat 31796
>emb|BX842702.13| Zebrafish DNA sequence from clone DKEY-226D17 in linkage group 20, complete sequence Length = 211769 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 124693 attctgatacaaaatgttat 124674
>emb|BX571821.11| Zebrafish DNA sequence from clone DKEY-286J7 in linkage group 20, complete sequence Length = 91760 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 19583 attctgatacaaaatgttat 19564
>emb|BX950206.7| Zebrafish DNA sequence from clone DKEYP-39F2 in linkage group 20, complete sequence Length = 77463 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 36332 attctgatacaaaatgttat 36313
>emb|BX649610.5| Zebrafish DNA sequence from clone CH211-170D11 in linkage group 18, complete sequence Length = 150831 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 139095 attctgatacaaaatgttat 139114
>emb|BX649373.4| Zebrafish DNA sequence from clone CH211-270E10 in linkage group 22, complete sequence Length = 49940 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 200 tttgaggttcaagctaagcttcactatg 227 |||||| |||||||| |||||||||||| Sbjct: 47931 tttgagtttcaagcttagcttcactatg 47958
>emb|BX510919.4| Zebrafish DNA sequence from clone DKEY-164K19 in linkage group 20, complete sequence Length = 243899 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 26949 attctgatacaaaatgttat 26930
>emb|AL672107.5| Zebrafish DNA sequence from clone BUSM1-84N18 in linkage group 1 Contains a novel lambda recombinase like pseudogene, a putative novel gene and two CpG islands, complete sequence Length = 106684 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 87184 attctgatacaaaatgttat 87165
>emb|CR391947.13| Zebrafish DNA sequence from clone DKEYP-88A4 in linkage group 1, complete sequence Length = 167207 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 34754 attctgatacaaaatgttat 34773
>emb|AL157688.4|CNS01RG0 Human chromosome 14 DNA sequence BAC R-594C13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 189918 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcttgattttctagccagga 312 |||||||||||||||||||| Sbjct: 69865 gcttgattttctagccagga 69884
>gb|AC109606.11| Mus musculus strain C57BL/6J chromosome 5 clone rp23-113m20, complete sequence Length = 210959 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 aggactgaaaaccagctggg 266 |||||||||||||||||||| Sbjct: 24247 aggactgaaaaccagctggg 24266
>emb|AL929568.12| Zebrafish DNA sequence from clone CH211-59K8, complete sequence Length = 185257 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 46214 attctgatacaaaatgttat 46195
>emb|CR847498.12| Zebrafish DNA sequence from clone DKEY-263P22 in linkage group 14, complete sequence Length = 168227 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 3492 attctgatacaaaatgttat 3473
>emb|BX530070.10| Zebrafish DNA sequence from clone DKEY-245C12 in linkage group 7, complete sequence Length = 191492 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 150705 attctgatacaaaatgttat 150686 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 2265 attctgatacaaaatgttat 2284
>emb|AL935292.5| Zebrafish DNA sequence from clone CH211-277P15, complete sequence Length = 145728 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attctgatacaaaatgttat 54 |||||||||||||||||||| Sbjct: 48598 attctgatacaaaatgttat 48617
>emb|AL928792.9| Mouse DNA sequence from clone RP23-88O15 on chromosome 2, complete sequence Length = 257463 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 aggactgaaaaccagctggg 266 |||||||||||||||||||| Sbjct: 5331 aggactgaaaaccagctggg 5312
>gb|AC171183.6| Mus musculus BAC RP24-545B2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 211697 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 aggactgaaaaccagctggg 266 |||||||||||||||||||| Sbjct: 185095 aggactgaaaaccagctggg 185076
>emb|AL626762.10| Mouse DNA sequence from clone RP23-68F3 on chromosome 4, complete sequence Length = 228767 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttctgatacaaaatgttatt 55 |||||||||||||||||||| Sbjct: 211829 ttctgatacaaaatgttatt 211810 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,655,585 Number of Sequences: 3902068 Number of extensions: 4655585 Number of successful extensions: 79733 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79522 Number of HSP's gapped (non-prelim): 211 length of query: 412 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 390 effective length of database: 17,147,199,772 effective search space: 6687407911080 effective search space used: 6687407911080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)