ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast59f10 |
|---|---|
| Clone Library Name | barley_pub |
>WRBA_METAC (P58796) Flavoprotein wrbA| Length = 209 Score = 36.2 bits (82), Expect = 0.031 Identities = 15/27 (55%), Positives = 21/27 (77%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPSE ELA+A +QG+++ KK+ Sbjct: 180 GSRQPSENELAMARYQGRHVTLIAKKI 206
>WRBA_SHIFL (P0A8G8) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 35.8 bits (81), Expect = 0.041 Identities = 15/27 (55%), Positives = 21/27 (77%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPS+ EL++A +QG+Y+A KL Sbjct: 169 GSRQPSQEELSIARYQGEYVAGLAVKL 195
>WRBA_SALTY (Q8ZQ40) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 35.8 bits (81), Expect = 0.041 Identities = 15/27 (55%), Positives = 21/27 (77%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPS+ EL++A +QG+Y+A KL Sbjct: 169 GSRQPSQEELSIARYQGEYVAGLAVKL 195
>WRBA_SALTI (Q8Z7N9) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 35.8 bits (81), Expect = 0.041 Identities = 15/27 (55%), Positives = 21/27 (77%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPS+ EL++A +QG+Y+A KL Sbjct: 169 GSRQPSQEELSIARYQGEYVAGLAVKL 195
>WRBA_SALPA (Q5PG91) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 35.8 bits (81), Expect = 0.041 Identities = 15/27 (55%), Positives = 21/27 (77%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPS+ EL++A +QG+Y+A KL Sbjct: 169 GSRQPSQEELSIARYQGEYVAGLAVKL 195
>WRBA_ECOLI (P0A8G6) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 35.8 bits (81), Expect = 0.041 Identities = 15/27 (55%), Positives = 21/27 (77%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPS+ EL++A +QG+Y+A KL Sbjct: 169 GSRQPSQEELSIARYQGEYVAGLAVKL 195
>WRBA_ECOL6 (P0A8G7) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 35.8 bits (81), Expect = 0.041 Identities = 15/27 (55%), Positives = 21/27 (77%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPS+ EL++A +QG+Y+A KL Sbjct: 169 GSRQPSQEELSIARYQGEYVAGLAVKL 195
>WRBA_ECO57 (Q8X4B4) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 35.8 bits (81), Expect = 0.041 Identities = 15/27 (55%), Positives = 21/27 (77%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPS+ EL++A +QG+Y+A KL Sbjct: 169 GSRQPSQEELSIARYQGEYVAGLAVKL 195
>WRBA_METMA (Q8PUV4) Flavoprotein wrbA| Length = 209 Score = 34.3 bits (77), Expect = 0.12 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPSE EL +A +QG+++ KK+ Sbjct: 180 GSRQPSENELEMARYQGRHVTQIAKKI 206
>WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) Length = 559 Score = 32.7 bits (73), Expect = 0.35 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = -2 Query: 382 SPSTRASTWPPS*RSSVMPDSEPADGPSIEPVSSQSASI 266 +P A PPS S V+P SEP PS PV S + S+ Sbjct: 462 APGPHAPLMPPSPPSQVLPASEPKRHPSTLPVISDARSV 500
>WRBA_YERPS (Q66BP3) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 199 Score = 32.7 bits (73), Expect = 0.35 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPS ELA+A QG+++A KL Sbjct: 171 GSRQPSAEELAIARFQGEHVAKITAKL 197
>WRBA_YERPE (Q8ZF61) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 199 Score = 32.7 bits (73), Expect = 0.35 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPS ELA+A QG+++A KL Sbjct: 171 GSRQPSAEELAIARFQGEHVAKITAKL 197
>WRBA_RHOPA (Q6NBB9) Flavoprotein wrbA| Length = 199 Score = 32.7 bits (73), Expect = 0.35 Identities = 17/27 (62%), Positives = 19/27 (70%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPSE ELA A +QGK +A KL Sbjct: 171 GSRQPSETELAGARYQGKTIAETAIKL 197
>WRBA_PHOLL (Q7N5I5) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 199 Score = 32.0 bits (71), Expect = 0.59 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSR P+E EL +A +QG+++A KKL Sbjct: 171 GSRIPNENELKIARYQGEHVAKIAKKL 197
>WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) (Verprolin homology domain-containing protein 1) Length = 559 Score = 30.8 bits (68), Expect = 1.3 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -2 Query: 382 SPSTRASTWPPS*RSSVMPDSEPADGPSIEPVSSQSASI 266 +P PPS S V+P SEP PS PV S + S+ Sbjct: 462 APGPHVPLMPPSPPSQVIPASEPKRHPSTLPVISDARSV 500
>WRBA_BRAJA (Q89D74) Flavoprotein wrbA| Length = 199 Score = 30.8 bits (68), Expect = 1.3 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPS ELA A +QG+ +A +KL Sbjct: 171 GSRQPSANELAGARYQGRQIAETARKL 197
>WRBA_ZYMMO (Q9XBR5) Flavoprotein wrbA| Length = 200 Score = 30.0 bits (66), Expect = 2.3 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPS+ EL A+ GK++A KKL Sbjct: 171 GSRQPSKNELDGAKFLGKHVAELAKKL 197
>ALTA7_ALTAL (P42058) Minor allergen Alt a 7 (Alt a VII)| Length = 204 Score = 29.6 bits (65), Expect = 2.9 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKK 339 GSRQPSE EL +A+ QGK V K Sbjct: 176 GSRQPSELELNIAQAQGKAFYEAVAK 201
>WRBA_AGRT5 (P58795) Flavoprotein wrbA| Length = 199 Score = 29.6 bits (65), Expect = 2.9 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPS EL A +QG ++A KL Sbjct: 171 GSRQPSAIELDAARYQGAHVAKLAAKL 197
>WRBA_GEOSL (Q74F05) Flavoprotein wrbA| Length = 203 Score = 29.3 bits (64), Expect = 3.8 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 G R PSE +LA A QG+Y+A KL Sbjct: 175 GERLPSENDLAGARFQGRYVAQIAAKL 201
>WRBA_CAUCR (Q9AA17) Flavoprotein wrbA| Length = 199 Score = 29.3 bits (64), Expect = 3.8 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPSE EL A +QG+ +A KL Sbjct: 171 GSRQPSENELTGARYQGRKIAETAIKL 197
>WRBA1_RHIME (Q92PU3) Flavoprotein wrbA 1| Length = 199 Score = 29.3 bits (64), Expect = 3.8 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMAAFVKKL 336 GSRQPS EL A QG ++A KL Sbjct: 171 GSRQPSAVELEAARFQGAHVARIAAKL 197
>WRBA2_RHIME (Q930L2) Flavoprotein wrbA 2| Length = 202 Score = 28.9 bits (63), Expect = 5.0 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = -1 Query: 416 GSRQPSEAELALAEHQGKYMA 354 GSRQPS+ +LA A HQG+ +A Sbjct: 171 GSRQPSQIDLAGAFHQGEIVA 191
>ALGP_PSEAE (P15276) Transcriptional regulatory protein algP (Alginate| regulatory protein algR3) Length = 352 Score = 28.5 bits (62), Expect = 6.6 Identities = 12/48 (25%), Positives = 27/48 (56%) Frame = -2 Query: 412 AGSPARRNLRSPSTRASTWPPS*RSSVMPDSEPADGPSIEPVSSQSAS 269 A PA + P +++ P+ + + P ++PA P+ +PV+++ A+ Sbjct: 263 AAKPAAKPAAKPVAKSAAAKPAAKPAAKPAAKPAAKPAAKPVAAKPAA 310
>K0552_HUMAN (O60299) Protein KIAA0552| Length = 673 Score = 28.1 bits (61), Expect = 8.6 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = +3 Query: 237 EQAKLKRKQWMLADWLLTGSMDGPS-AGSESGMTELLHEGGHVLALVLGERKFR 395 ++AK++R+ + A L S+DG + AG ESG L E G + A + ER+ R Sbjct: 539 DEAKMRRQAGVAAAASLV-SVDGEAEAGGESGTRALRREVGRLQAELAAERRAR 591
>ANTE_BACSU (Q7WY63) Protein antE| Length = 98 Score = 28.1 bits (61), Expect = 8.6 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 83 KELTGSRRGLILQMDNKHHLCQQMYKET 166 K L G R GL+ ++N+ +CQQ K T Sbjct: 10 KTLAGLRNGLLYHLENQFGICQQGEKPT 37 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,105,759 Number of Sequences: 219361 Number of extensions: 997850 Number of successful extensions: 2754 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2659 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2753 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
