ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast59c06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY625683.1| Triticum aestivum NAC domain transcription factor (NAC2) mRNA, complete cds Length = 1450 Score = 220 bits (111), Expect = 3e-54 Identities = 177/198 (89%), Gaps = 12/198 (6%) Strand = Plus / Minus Query: 1 ggttgatttctactgaagagaaggaagaaacagagctacatatgtatttggtcggtcgat 60 |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1430 ggttgatttctactgaagagaaggaaagaacagagctacatatgtattcggtcggtcgat 1371 Query: 61 tctcattctactactgaggagtgagaagagaagagagctacatccgcattgagagtacaa 120 ||| |||| ||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 1370 tct------actagtgaggagtgagaagaaa---gagctacatccgcattgagagtacaa 1320 Query: 121 ---agtaagaacgaaagaatcaacccagccggccaggccccggcgccgggctctccatgt 177 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1319 ggtagtaagaacaaaagaatcaacccagccggccaggccccggcgccgggctctccatgt 1260 Query: 178 acagcaacacgccccggc 195 ||| | ||||||||||| Sbjct: 1259 acaacggcacgccccggc 1242 Score = 143 bits (72), Expect = 5e-31 Identities = 157/184 (85%), Gaps = 16/184 (8%) Strand = Plus / Minus Query: 240 cctccctcccgtttcctatgctgtatttacactgcaccgcgatctcgctcgctcgcccgc 299 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 1207 cctccctcccgtttcctatgctgtatttacactgcaccgcggtctcgctcgct----cgc 1152 Query: 300 ggcgaagaagtcatccattccgcttctgtcgatc----ggagtctgacggtctgatggtc 355 ||| |||||||| |||||||| |||||||||||| || |||||||||| || Sbjct: 1151 ggccaagaagtcgtccattccacttctgtcgatctcggggtctctgacggtc------tc 1098 Query: 356 tgtctttgctgtgtgcttagaacggggctggcatgccgccggagccgggctggctgcccc 415 ||||||||| | ||||||||||||||| ||||||||||||| |||||||||||| || | Sbjct: 1097 tgtctttgc--tctgcttagaacggggccggcatgccgccggcgccgggctggctcccgc 1040 Query: 416 ggac 419 |||| Sbjct: 1039 ggac 1036
>gb|DQ132799.1| Lagenorhynchus albirostris dopamine D4 receptor (DRD4) gene, partial cds Length = 2703 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 187 cgccccggcgccgccgccctcaccacgc 214 ||||||||| |||||||||||||||||| Sbjct: 1829 cgccccggccccgccgccctcaccacgc 1856
>emb|AL160169.12| Human DNA sequence from clone RP11-405C6 on chromosome 9 Contains the 3' end of the gene for a novel protein (KIAA1993), the 5' end of the RALGPS1A gene for Ral guanine nucleotide exchange factor RalGPS1A (RALGEF2, KIAA0351) and a CpG island, complete sequence Length = 124025 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 146 ccggccaggccccggcgccgggc 168 ||||||||||||||||||||||| Sbjct: 31481 ccggccaggccccggcgccgggc 31459
>gb|AC119670.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0007H22, complete sequence Length = 160938 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 76 gaggagtgagaagagaagagag 97 |||||||||||||||||||||| Sbjct: 27205 gaggagtgagaagagaagagag 27184
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 gaggagtgagaagagaagagag 97 |||||||||||||||||||||| Sbjct: 6859646 gaggagtgagaagagaagagag 6859667
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 gaggagtgagaagagaagagag 97 |||||||||||||||||||||| Sbjct: 6926113 gaggagtgagaagagaagagag 6926134
>gb|AC100893.13| Mus musculus chromosome 8, clone RP23-68I8, complete sequence Length = 253420 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 gtctgtctttgctgtgtgctt 373 ||||||||||||||||||||| Sbjct: 42280 gtctgtctttgctgtgtgctt 42300
>gb|AC129331.4| Mus musculus BAC clone RP23-75C8 from chromosome 8, complete sequence Length = 257765 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 gtctgtctttgctgtgtgctt 373 ||||||||||||||||||||| Sbjct: 198062 gtctgtctttgctgtgtgctt 198082
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 cccagccggccaggccccggc 161 ||||||||||||||||||||| Sbjct: 353745 cccagccggccaggccccggc 353765
>ref|XM_681091.1| PREDICTED: Danio rerio similar to CD11-1 (LOC557935), mRNA Length = 3147 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 gtctgtctttgctgtgtgctt 373 ||||||||||||||||||||| Sbjct: 916 gtctgtctttgctgtgtgctt 896
>gb|AC007330.6|AC007330 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR30G11, complete sequence Length = 166854 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gtctgacggtctgatggtctg 357 ||||||||||||||||||||| Sbjct: 147408 gtctgacggtctgatggtctg 147388
>gb|AC007413.5|AC007413 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR01L01, complete sequence Length = 160301 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gtctgacggtctgatggtctg 357 ||||||||||||||||||||| Sbjct: 102490 gtctgacggtctgatggtctg 102470
>gb|AC092609.2| Homo sapiens BAC clone RP11-160A16 from 4, complete sequence Length = 150751 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 ggagtgagaagagaagagagc 98 ||||||||||||||||||||| Sbjct: 27297 ggagtgagaagagaagagagc 27277
>gb|AF297331.1|AF297331 Drosophila melanogaster Mef2 gene, promoter region Length = 939 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 gtctgacggtctgatggtctg 357 ||||||||||||||||||||| Sbjct: 281 gtctgacggtctgatggtctg 301
>gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19 of 73 of the complete sequence Length = 275390 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gtctgacggtctgatggtctg 357 ||||||||||||||||||||| Sbjct: 88336 gtctgacggtctgatggtctg 88316
>gb|AC004061.1|AC004061 Homo sapiens chromosome 4 clone B299F15 map 4q21, complete sequence Length = 117101 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 ggagtgagaagagaagagagc 98 ||||||||||||||||||||| Sbjct: 113694 ggagtgagaagagaagagagc 113674
>emb|CR385050.10| Zebrafish DNA sequence from clone DKEY-22I16 in linkage group 1, complete sequence Length = 145760 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 gaagagaaggaagaaacagag 35 ||||||||||||||||||||| Sbjct: 28209 gaagagaaggaagaaacagag 28189
>ref|XM_482906.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1317 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 ccggcgccgccgccctcaccacgc 214 |||||||||||||| ||||||||| Sbjct: 952 ccggcgccgccgccatcaccacgc 975
>gb|AC120865.7| Mus musculus chromosome 5, clone RP23-88L6, complete sequence Length = 235287 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ctttgctgtgtgcttagaac 378 |||||||||||||||||||| Sbjct: 169596 ctttgctgtgtgcttagaac 169577
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 gccggagccgggctggctgc 412 |||||||||||||||||||| Sbjct: 933819 gccggagccgggctggctgc 933838
>gb|AC105768.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1122_B08, complete sequence Length = 143955 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tactgaggagtgagaagaga 91 |||||||||||||||||||| Sbjct: 102255 tactgaggagtgagaagaga 102236
>gb|AY605898.1| Homo sapiens haplotype 1 alpha2C adrenergic receptor (ADRA2C) gene, complete cds Length = 4625 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gcaacacgccccggcgccgccgcc 204 ||||| |||||||||||||||||| Sbjct: 3541 gcaacgcgccccggcgccgccgcc 3518
>gb|AY657546.1| Synthetic construct Peudomonas aeruginosa clone FLH040966.01F PA3379 gene, partial cds Length = 630 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 289 cgctcgcccgcggcgaagaagtcatcca 316 |||||||| |||||||||||| |||||| Sbjct: 572 cgctcgccggcggcgaagaaggcatcca 545
>gb|AC123614.6| Mus musculus chromosome 9, clone RP23-446P16, complete sequence Length = 210060 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 agaaggaagaaacagagcta 38 |||||||||||||||||||| Sbjct: 158038 agaaggaagaaacagagcta 158019
>ref|XM_545684.2| PREDICTED: Canis familiaris hypothetical LOC488567 (LOC488567), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 ggctggctgccccggaccct 422 |||||||||||||||||||| Sbjct: 802 ggctggctgccccggaccct 821
>gb|AY455666.1| Homo sapiens adrenergic receptor alpha 2C (ADRA2C) gene, complete cds Length = 1377 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gcaacacgccccggcgccgccgcc 204 ||||| |||||||||||||||||| Sbjct: 904 gcaacgcgccccggcgccgccgcc 881
>ref|NM_000683.3| Homo sapiens adrenergic, alpha-2C-, receptor (ADRA2C), mRNA Length = 1958 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gcaacacgccccggcgccgccgcc 204 ||||| |||||||||||||||||| Sbjct: 942 gcaacgcgccccggcgccgccgcc 919
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cggcgccgccgccctcacca 211 |||||||||||||||||||| Sbjct: 2932994 cggcgccgccgccctcacca 2933013
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 cccggcgccgccgccctcac 209 |||||||||||||||||||| Sbjct: 856481 cccggcgccgccgccctcac 856500
>emb|CR590957.1| full-length cDNA clone CS0DI021YC24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1600 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gcaacacgccccggcgccgccgcc 204 ||||| |||||||||||||||||| Sbjct: 1163 gcaacgcgccccggcgccgccgcc 1140
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 ccggcgccgccgccctcaccacgc 214 |||||||||||||| ||||||||| Sbjct: 7215540 ccggcgccgccgccatcaccacgc 7215517
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 ggagtgagaagagaagagag 97 |||||||||||||||||||| Sbjct: 15476271 ggagtgagaagagaagagag 15476252
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 ccggcgccgccgccctcaccacgc 214 |||||||||||||| ||||||||| Sbjct: 23257234 ccggcgccgccgccatcaccacgc 23257257
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 ccggcgccgccgccctcacc 210 |||||||||||||||||||| Sbjct: 19799840 ccggcgccgccgccctcacc 19799821 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 ccggcgccgccgccctcaccacgc 214 |||||||||||||| ||||||||| Sbjct: 5134862 ccggcgccgccgccatcaccacgc 5134839
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tactgaggagtgagaagaga 91 |||||||||||||||||||| Sbjct: 28800516 tactgaggagtgagaagaga 28800535 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tactgaggagtgagaagaga 91 |||||||||||||||||||| Sbjct: 8381211 tactgaggagtgagaagaga 8381192
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 ccggcgccgccgccctcaccacgc 214 |||||||||||||| ||||||||| Sbjct: 37558399 ccggcgccgccgccatcaccacgc 37558422 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ggagtgagaagagaagagag 97 |||||||||||||||||||| Sbjct: 28900716 ggagtgagaagagaagagag 28900735
>gb|AC141928.2| Homo sapiens fosmid clone XXFOS-85085A9 from 4, complete sequence Length = 40040 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gcaacacgccccggcgccgccgcc 204 ||||| |||||||||||||||||| Sbjct: 13557 gcaacgcgccccggcgccgccgcc 13534
>gb|AC096670.1| Homo sapiens BAC clone RP11-438K19 from 2, complete sequence Length = 181497 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 26 agaaacagagctacatatgtatttggtc 53 ||||||||||| |||||||||| ||||| Sbjct: 173130 agaaacagagccacatatgtatatggtc 173157
>gb|AF280400.1|AF280400 Homo sapiens alpha 2C adrenergic receptor variant (ADRA2C) gene, complete cds Length = 1377 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gcaacacgccccggcgccgccgcc 204 ||||| |||||||||||||||||| Sbjct: 904 gcaacgcgccccggcgccgccgcc 881
>gb|AF280399.1|AF280399 Homo sapiens alpha 2C adrenergic receptor (ADRA2C) gene, complete cds Length = 1389 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gcaacacgccccggcgccgccgcc 204 ||||| |||||||||||||||||| Sbjct: 904 gcaacgcgccccggcgccgccgcc 881
>gb|AE004759.1| Pseudomonas aeruginosa PAO1, section 320 of 529 of the complete genome Length = 14309 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 cgctcgcccgcggcgaagaagtcatcca 316 |||||||| |||||||||||| |||||| Sbjct: 9563 cgctcgccggcggcgaagaaggcatcca 9590
>ref|XM_214563.3| PREDICTED: Rattus norvegicus titin immunoglobulin domain protein (myotilin) (predicted) (Ttid_predicted), mRNA Length = 2211 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctactgaagagaaggaagaa 29 |||||||||||||||||||| Sbjct: 47 ctactgaagagaaggaagaa 28
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 ccggcgccgccgccctcaccacgc 214 |||||||||||||| ||||||||| Sbjct: 18873 ccggcgccgccgccatcaccacgc 18896
>dbj|AP003254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0454A11 Length = 152240 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ggagtgagaagagaagagag 97 |||||||||||||||||||| Sbjct: 13339 ggagtgagaagagaagagag 13358
>dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0013B04 Length = 141319 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 ccggcgccgccgccctcaccacgc 214 |||||||||||||| ||||||||| Sbjct: 56585 ccggcgccgccgccatcaccacgc 56608
>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1147_D11 Length = 138444 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 ccggcgccgccgccctcaccacgc 214 |||||||||||||| ||||||||| Sbjct: 93900 ccggcgccgccgccatcaccacgc 93877
>emb|BX005106.5| Zebrafish DNA sequence from clone DKEY-188I13, complete sequence Length = 216863 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tctcgctcgctcgcccgcgg 301 |||||||||||||||||||| Sbjct: 159106 tctcgctcgctcgcccgcgg 159125
>dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0551A03 Length = 173027 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 ccggcgccgccgccctcacc 210 |||||||||||||||||||| Sbjct: 66885 ccggcgccgccgccctcacc 66866
>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016O19 Length = 169120 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 ccggcgccgccgccctcaccacgc 214 |||||||||||||| ||||||||| Sbjct: 1584 ccggcgccgccgccatcaccacgc 1561
>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1299_A11 Length = 160099 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 ggagtgagaagagaagagag 97 |||||||||||||||||||| Sbjct: 125563 ggagtgagaagagaagagag 125544
>gb|AC107641.11| Mus musculus chromosome 7, clone RP23-54G8, complete sequence Length = 164725 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 aagagaagagagctacatcc 105 |||||||||||||||||||| Sbjct: 140488 aagagaagagagctacatcc 140469
>dbj|AK109530.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-B05, full insert sequence Length = 804 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ccggcgccgccgccctcacc 210 |||||||||||||||||||| Sbjct: 403 ccggcgccgccgccctcacc 422
>emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035O13, complete sequence Length = 143298 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 ccggcgccgccgccctcaccacgc 214 |||||||||||||| ||||||||| Sbjct: 79277 ccggcgccgccgccatcaccacgc 79254
>gb|AC000114.1|HSAC000114 Human PAC clone DJ527C21 from Xq23, complete sequence Length = 172151 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gagtgagaagagaagagagc 98 |||||||||||||||||||| Sbjct: 151475 gagtgagaagagaagagagc 151456
>emb|AL772326.5| Mouse DNA sequence from clone RP23-267E14 on chromosome 4, complete sequence Length = 165398 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctgaagagaaggaagaaaca 32 |||||||||||||||||||| Sbjct: 143304 ctgaagagaaggaagaaaca 143323
>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035N21, complete sequence Length = 128331 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tactgaggagtgagaagaga 91 |||||||||||||||||||| Sbjct: 72951 tactgaggagtgagaagaga 72932
>dbj|D13538.1|HUMA2CIIA Human alpha2CII-adrenergic receptor gene, complete cds Length = 1382 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gcaacacgccccggcgccgccgcc 204 ||||| |||||||||||||||||| Sbjct: 906 gcaacgcgccccggcgccgccgcc 883 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,095,952 Number of Sequences: 3902068 Number of extensions: 4095952 Number of successful extensions: 201497 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 200364 Number of HSP's gapped (non-prelim): 1129 length of query: 422 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 400 effective length of database: 17,147,199,772 effective search space: 6858879908800 effective search space used: 6858879908800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
