>gb|BT016329.1| Zea mays clone Contig162 mRNA sequence
          Length = 1199

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                            
Query: 358 aagcaaacctagcaggcatccagatccctgcatgggggaggttttggct 406
           ||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 909 aagcaaacctagcaggcatccagatccctgcatggaggaggtttcggct 861

>gb|AY106442.1| Zea mays PCO078493 mRNA sequence
          Length = 1289

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                            
Query: 358 aagcaaacctagcaggcatccagatccctgcatgggggaggttttggct 406
           ||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 917 aagcaaacctagcaggcatccagatccctgcatggaggaggtttcggct 869

>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0108E17, complete sequence
          Length = 139829

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                               
Query: 357   aaagcaaacctagcaggcatccagatccctgcatgggggaggttttggct 406
             ||||||||||||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 86071 aaagcaaacctagcaagcatctagatccctgcacggaggaggtttcggct 86022

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 357      aaagcaaacctagcaggcatccagatccctgcatgggggaggttttggct 406
                ||||||||||||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 25017218 aaagcaaacctagcaagcatctagatccctgcacggaggaggtttcggct 25017169

>dbj|AK100226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048E09, full
           insert sequence
          Length = 1120

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 357 aaagcaaacctagcaggcatccagatccctgcatgggggaggttttggct 406
           ||||||||||||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 885 aaagcaaacctagcaagcatctagatccctgcacggaggaggtttcggct 836

>dbj|AK099007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114B12, full
           insert sequence
          Length = 1147

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 357 aaagcaaacctagcaggcatccagatccctgcatgggggaggttttggct 406
           ||||||||||||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 887 aaagcaaacctagcaagcatctagatccctgcacggaggaggtttcggct 838

>dbj|AK061566.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E10, full
           insert sequence
          Length = 1219

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 357 aaagcaaacctagcaggcatccagatccctgcatgggggaggttttggct 406
           ||||||||||||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 890 aaagcaaacctagcaagcatctagatccctgcacggaggaggtttcggct 841

>emb|BX539307.6| Zebrafish DNA sequence from clone DKEY-253D23 in linkage group 22,
             complete sequence
          Length = 183551

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 153   gcaaaccaaggggaaaaaagaga 175
             |||||||||||||||||||||||
Sbjct: 22001 gcaaaccaaggggaaaaaagaga 21979

>ref|XM_475674.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 825

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 366 ctagcaggcatccagatccctgcatgggggaggttttggct 406
           |||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 825 ctagcaagcatctagatccctgcacggaggaggtttcggct 785

>gb|U50066.1| Caenorhabditis elegans cosmid T14A8, complete sequence
          Length = 9170

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 260  acaagaaagctttgagaaca 279
            ||||||||||||||||||||
Sbjct: 7589 acaagaaagctttgagaaca 7608

>gb|AC011899.5| Homo sapiens BAC clone RP11-452C13 from 7, complete sequence
          Length = 214229

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    ggtgtgtccagggccccaga 60
             ||||||||||||||||||||
Sbjct: 42507 ggtgtgtccagggccccaga 42488

>emb|AL604002.8| Mouse DNA sequence from clone RP23-386F6 on chromosome 11, complete
              sequence
          Length = 142134

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     cagggccccagattcttatg 68
              ||||||||||||||||||||
Sbjct: 106779 cagggccccagattcttatg 106760

>gb|AF238375.3| Homo sapiens chromosome 21 clone BAC 49B5 map 21q21, complete sequence
          Length = 166124

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 325    gccaacttatttgtgtgcttgctt 348
              |||||||| |||||||||||||||
Sbjct: 116671 gccaacttgtttgtgtgcttgctt 116648

>emb|CR389787.1| Gallus gallus finished cDNA, clone ChEST713n9
          Length = 855

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 207 caaaagaaagcttcgacaacaaca 230
           ||||||||||||| ||||||||||
Sbjct: 439 caaaagaaagctttgacaacaaca 462

>gb|BC034557.1| Homo sapiens, clone IMAGE:4475530, mRNA
          Length = 4319

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   ggtgtgtccagggccccaga 60
            ||||||||||||||||||||
Sbjct: 1303 ggtgtgtccagggccccaga 1284

>dbj|BS000057.1| Pan troglodytes chromosome 22 clone:RP43-020J03, map 22, complete
              sequences
          Length = 185342

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 325    gccaacttatttgtgtgcttgctt 348
              |||||||| |||||||||||||||
Sbjct: 111538 gccaacttgtttgtgtgcttgctt 111515

>gb|AC147627.6| Mus musculus BAC clone RP24-382F19 from Y, complete sequence
          Length = 226237

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     cagctccagaatatatagca 116
              ||||||||||||||||||||
Sbjct: 200942 cagctccagaatatatagca 200923

>dbj|AP001677.1| Homo sapiens genomic DNA, chromosome 21q, section 21/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 325    gccaacttatttgtgtgcttgctt 348
              |||||||| |||||||||||||||
Sbjct: 304239 gccaacttgtttgtgtgcttgctt 304216

>gb|AC116556.14| Mus musculus strain C57BL/6J chromosome 8 clone rp23-184i13, complete
              sequence
          Length = 239958

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 331    ttatttgtgtgcttgcttgc 350
              ||||||||||||||||||||
Sbjct: 172254 ttatttgtgtgcttgcttgc 172273

>gb|AC140919.2| Mus musculus BAC clone RP24-510L10 from 1, complete sequence
          Length = 159472

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 331    ttatttgtgtgcttgcttgc 350
              ||||||||||||||||||||
Sbjct: 146961 ttatttgtgtgcttgcttgc 146980

>gb|AC173476.2| Mus musculus BAC clone RP24-335D7 from chromosome 12, complete sequence
          Length = 182245

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     cagctccagaatatatagca 116
              ||||||||||||||||||||
Sbjct: 109755 cagctccagaatatatagca 109736

>dbj|AP001256.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B732H1,
             LL56-APP region, complete sequence
          Length = 204699

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 325   gccaacttatttgtgtgcttgctt 348
             |||||||| |||||||||||||||
Sbjct: 48660 gccaacttgtttgtgtgcttgctt 48637


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,815,051
Number of Sequences: 3902068
Number of extensions: 3815051
Number of successful extensions: 70745
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70681
Number of HSP's gapped (non-prelim): 64
length of query: 406
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 384
effective length of database: 17,147,199,772
effective search space: 6584524712448
effective search space used: 6584524712448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)