>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  131 bits (66), Expect = 2e-27
 Identities = 156/186 (83%)
 Strand = Plus / Minus

                                                                            
Query: 223      tcagtacagggtgttgtaagtgccgaacgtcgcggcgatggaggctacgcagatgaccag 282
                ||||||||||| ||| || ||||  || |||||| ||||||| ||||||||||| || | 
Sbjct: 27720319 tcagtacagggagttataggtgcaaaatgtcgcgacgatggaagctacgcagatcacgaa 27720260

                                                                            
Query: 283      ggacgggagcagggtggcgttcaggagctggctctgccccaggtaccccgcggcggtgat 342
                |||||| ||||||||  | ||||||||   | |||| || ||||| ||||| || |||||
Sbjct: 27720259 ggacggaagcagggttacattcaggaggctgttctggccaaggtaacccgccgccgtgat 27720200

                                                                            
Query: 343      cgtcatgtccgcggcgacgcgggccagcgtcccggcctccgtcgagaggagcccgccgtt 402
                |||||||||||| |||||||| ||||  || ||||| |||||||||||||||||||||||
Sbjct: 27720199 cgtcatgtccgccgcgacgcgagccaaagtgccggcttccgtcgagaggagcccgccgtt 27720140

                      
Query: 403      gtaggt 408
                ||||||
Sbjct: 27720139 gtaggt 27720134

>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0663F07
          Length = 159046

 Score =  131 bits (66), Expect = 2e-27
 Identities = 156/186 (83%)
 Strand = Plus / Minus

                                                                        
Query: 223  tcagtacagggtgttgtaagtgccgaacgtcgcggcgatggaggctacgcagatgaccag 282
            ||||||||||| ||| || ||||  || |||||| ||||||| ||||||||||| || | 
Sbjct: 5652 tcagtacagggagttataggtgcaaaatgtcgcgacgatggaagctacgcagatcacgaa 5593

                                                                        
Query: 283  ggacgggagcagggtggcgttcaggagctggctctgccccaggtaccccgcggcggtgat 342
            |||||| ||||||||  | ||||||||   | |||| || ||||| ||||| || |||||
Sbjct: 5592 ggacggaagcagggttacattcaggaggctgttctggccaaggtaacccgccgccgtgat 5533

                                                                        
Query: 343  cgtcatgtccgcggcgacgcgggccagcgtcccggcctccgtcgagaggagcccgccgtt 402
            |||||||||||| |||||||| ||||  || ||||| |||||||||||||||||||||||
Sbjct: 5532 cgtcatgtccgccgcgacgcgagccaaagtgccggcttccgtcgagaggagcccgccgtt 5473

                  
Query: 403  gtaggt 408
            ||||||
Sbjct: 5472 gtaggt 5467

>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0005A04
          Length = 140723

 Score =  131 bits (66), Expect = 2e-27
 Identities = 156/186 (83%)
 Strand = Plus / Minus

                                                                          
Query: 223    tcagtacagggtgttgtaagtgccgaacgtcgcggcgatggaggctacgcagatgaccag 282
              ||||||||||| ||| || ||||  || |||||| ||||||| ||||||||||| || | 
Sbjct: 106185 tcagtacagggagttataggtgcaaaatgtcgcgacgatggaagctacgcagatcacgaa 106126

                                                                          
Query: 283    ggacgggagcagggtggcgttcaggagctggctctgccccaggtaccccgcggcggtgat 342
              |||||| ||||||||  | ||||||||   | |||| || ||||| ||||| || |||||
Sbjct: 106125 ggacggaagcagggttacattcaggaggctgttctggccaaggtaacccgccgccgtgat 106066

                                                                          
Query: 343    cgtcatgtccgcggcgacgcgggccagcgtcccggcctccgtcgagaggagcccgccgtt 402
              |||||||||||| |||||||| ||||  || ||||| |||||||||||||||||||||||
Sbjct: 106065 cgtcatgtccgccgcgacgcgagccaaagtgccggcttccgtcgagaggagcccgccgtt 106006

                    
Query: 403    gtaggt 408
              ||||||
Sbjct: 106005 gtaggt 106000

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                         
Query: 362     cgggccagcgtcccggcctccgtcgagaggagcccgccgttgtaggtgccccgggaga 419
               |||||||  ||||| ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 1559586 cgggccaaggtcccagcctccgtcgagaggagcccgccattgtaggtgccacgggaga 1559529

>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0538C01
          Length = 155643

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                       
Query: 362   cgggccagcgtcccggcctccgtcgagaggagcccgccgttgtaggtgccccgggaga 419
             |||||||  ||||| ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 88310 cgggccaaggtcccagcctccgtcgagaggagcccgccattgtaggtgccacgggaga 88253

>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence
          Length = 103866

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 121/149 (81%)
 Strand = Plus / Minus

                                                                          
Query: 254    gcggcgatggaggctacgcagatgaccagggacgggagcagggtggcgttcaggagctgg 313
              ||||||||||| ||  ||||||||| ||| ||||| ||||| ||||||||||| |||   
Sbjct: 101470 gcggcgatggacgcggcgcagatgagcagcgacggcagcagcgtggcgttcagcagcgcc 101411

                                                                          
Query: 314    ctctgccccaggtaccccgcggcggtgatcgtcatgtccgcggcgacgcgggccagcgtc 373
              | ||||||||||||||| ||    ||||| |||  ||| ||||| || || |||||||| 
Sbjct: 101410 ccctgccccaggtacccggccagcgtgatggtcccgtcggcggccacccgcgccagcgtg 101351

                                           
Query: 374    ccggcctccgtcgagaggagcccgccgtt 402
              |||||||| ||||| || |||||||||||
Sbjct: 101350 ccggcctcggtcgacagcagcccgccgtt 101322

>ref|XM_473572.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2178

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 362  cgggccagcgtcccggcctccgtcgagaggagcccgccgttgtaggt 408
            |||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 2039 cgggccagcgtcccggcctctgtcgacaggaggccgccgttgtaggt 1993



 Score = 46.1 bits (23), Expect = 0.091
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 225  agtacagggtgttgtaagtgccgaacgtcgcggcgatggaggctacgcagatgac 279
            |||||||||||||||| |||| ||| || ||  ||| |||||||| |||||||||
Sbjct: 2176 agtacagggtgttgtatgtgcagaatgttgcaacgagggaggctatgcagatgac 2122

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                               
Query: 362      cgggccagcgtcccggcctccgtcgagaggagcccgccgttgtaggt 408
                |||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 28841974 cgggccagcgtcccggcctctgtcgacaggaggccgccgttgtaggt 28841928



 Score = 46.1 bits (23), Expect = 0.091
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                       
Query: 225      agtacagggtgttgtaagtgccgaacgtcgcggcgatggaggctacgcagatgac 279
                |||||||||||||||| |||| ||| || ||  ||| |||||||| |||||||||
Sbjct: 28842111 agtacagggtgttgtatgtgcagaatgttgcaacgagggaggctatgcagatgac 28842057

>dbj|AK066068.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056J05, full
            insert sequence
          Length = 2706

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 362  cgggccagcgtcccggcctccgtcgagaggagcccgccgttgtaggt 408
            |||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 2420 cgggccagcgtcccggcctctgtcgacaggaggccgccgttgtaggt 2374



 Score = 46.1 bits (23), Expect = 0.091
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 225  agtacagggtgttgtaagtgccgaacgtcgcggcgatggaggctacgcagatgac 279
            |||||||||||||||| |||| ||| || ||  ||| |||||||| |||||||||
Sbjct: 2557 agtacagggtgttgtatgtgcagaatgttgcaacgagggaggctatgcagatgac 2503

>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04,
             complete sequence
          Length = 154865

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                            
Query: 362   cgggccagcgtcccggcctccgtcgagaggagcccgccgttgtaggt 408
             |||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 54036 cgggccagcgtcccggcctctgtcgacaggaggccgccgttgtaggt 53990



 Score = 46.1 bits (23), Expect = 0.091
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 225   agtacagggtgttgtaagtgccgaacgtcgcggcgatggaggctacgcagatgac 279
             |||||||||||||||| |||| ||| || ||  ||| |||||||| |||||||||
Sbjct: 54173 agtacagggtgttgtatgtgcagaatgttgcaacgagggaggctatgcagatgac 54119

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 365      gccagcgtcccggcctccgtcgagaggagcccgccgttgta 405
                |||| |||||| ||||||||||| || ||||||||||||||
Sbjct: 20076484 gccaccgtccccgcctccgtcgacagcagcccgccgttgta 20076524



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 254      gcggcgatggaggctacgcagatgaccagggacgggagcagggtggcgtt 303
                |||||||||||||| ||||||| || ||| | ||| ||||| ||||||||
Sbjct: 20076370 gcggcgatggaggcgacgcagacgagcagcgccggcagcagcgtggcgtt 20076419

>dbj|AP006859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
             fosmid clone:OSJNOa273B05
          Length = 41326

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 365   gccagcgtcccggcctccgtcgagaggagcccgccgttgta 405
             |||| |||||| ||||||||||| || ||||||||||||||
Sbjct: 11410 gccaccgtccccgcctccgtcgacagcagcccgccgttgta 11450



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 254   gcggcgatggaggctacgcagatgaccagggacgggagcagggtggcgtt 303
             |||||||||||||| ||||||| || ||| | ||| ||||| ||||||||
Sbjct: 11296 gcggcgatggaggcgacgcagacgagcagcgccggcagcagcgtggcgtt 11345

>gb|AY112132.1| Zea mays CL35113_1 mRNA sequence
          Length = 1069

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 362 cgggccagcgtcccggcctccgtcgagaggagcccgccgttgtaggtgccccggga 417
           ||||||| |||||||||||| ||||| ||||| || || |||||||| || |||||
Sbjct: 324 cgggccaacgtcccggcctctgtcgaaaggagtccaccattgtaggtccctcggga 379

>gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome
          Length = 235645

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 370   cgtcccggcctccgtcgagag 390
             |||||||||||||||||||||
Sbjct: 51602 cgtcccggcctccgtcgagag 51582

>gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete sequence
          Length = 233739

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 370    cgtcccggcctccgtcgagag 390
              |||||||||||||||||||||
Sbjct: 170602 cgtcccggcctccgtcgagag 170622

>gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequence
          Length = 234881

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 370   cgtcccggcctccgtcgagag 390
             |||||||||||||||||||||
Sbjct: 87308 cgtcccggcctccgtcgagag 87288

>gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete sequence
          Length = 226889

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 370    cgtcccggcctccgtcgagag 390
              |||||||||||||||||||||
Sbjct: 172000 cgtcccggcctccgtcgagag 172020

>gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequence
          Length = 229700

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 370    cgtcccggcctccgtcgagag 390
              |||||||||||||||||||||
Sbjct: 176665 cgtcccggcctccgtcgagag 176685

>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence
          Length = 229483

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 370   cgtcccggcctccgtcgagag 390
             |||||||||||||||||||||
Sbjct: 83460 cgtcccggcctccgtcgagag 83440

>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome
          Length = 231236

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 370   cgtcccggcctccgtcgagag 390
             |||||||||||||||||||||
Sbjct: 50156 cgtcccggcctccgtcgagag 50136

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 149    ttcgactagcagcttggcctcgccg 173
              |||||| ||||||||||||||||||
Sbjct: 887521 ttcgacgagcagcttggcctcgccg 887545

>emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complete genome
          Length = 229354

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 370   cgtcccggcctccgtcgagag 390
             |||||||||||||||||||||
Sbjct: 51248 cgtcccggcctccgtcgagag 51228

>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 356     gcgacgcgggccagcgtcccg 376
               |||||||||||||||||||||
Sbjct: 2378035 gcgacgcgggccagcgtcccg 2378055

>gb|AC004224.1| Homo sapiens chromosome 16, cosmid clone 306E5 (LANL), complete
             sequence
          Length = 41495

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   ggagctggctctgccccagg 325
             ||||||||||||||||||||
Sbjct: 32350 ggagctggctctgccccagg 32331

>ref|XM_449022.1| Candida glabrata CBS138, CAGL0L05676g partial mRNA
          Length = 6636

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 144  aaagcttcgactagcagctt 163
            ||||||||||||||||||||
Sbjct: 4445 aaagcttcgactagcagctt 4426

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 378     cctccgtcgagaggagcccgccgt 401
               ||||||||| ||||||||||||||
Sbjct: 4120519 cctccgtcgcgaggagcccgccgt 4120496

>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence
          Length = 1440588

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    aaagcttcgactagcagctt 163
              ||||||||||||||||||||
Sbjct: 624178 aaagcttcgactagcagctt 624159

>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete
             sequence
          Length = 162339

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   ccgtcgagaggagcccgccg 400
             ||||||||||||||||||||
Sbjct: 21042 ccgtcgagaggagcccgccg 21061

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 328     ccccgcggcggtgatcgtcatgtccgcg 355
               |||||||||||||||||| ||| |||||
Sbjct: 1102374 ccccgcggcggtgatcgtgatgcccgcg 1102401

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 381      ccgtcgagaggagcccgccg 400
                ||||||||||||||||||||
Sbjct: 16676525 ccgtcgagaggagcccgccg 16676544

>gb|CP000004.1| Gluconobacter oxydans 621H plasmid pGOX1, complete sequence
          Length = 163186

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    gcggcggtgatcgtcatgtc 351
              ||||||||||||||||||||
Sbjct: 147686 gcggcggtgatcgtcatgtc 147667

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 352    cgcggcgacgcgggccagcg 371
              ||||||||||||||||||||
Sbjct: 364145 cgcggcgacgcgggccagcg 364164

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 381      ccgtcgagaggagcccgccg 400
                ||||||||||||||||||||
Sbjct: 16685565 ccgtcgagaggagcccgccg 16685584


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,193,336
Number of Sequences: 3902068
Number of extensions: 2193336
Number of successful extensions: 39846
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39432
Number of HSP's gapped (non-prelim): 413
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)