| Clone Name | rbast59b05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engra... | 30 | 1.3 | 2 | BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein sh... | 30 | 1.7 | 3 | UREE_YERPS (P52317) Urease accessory protein ureE | 29 | 2.9 | 4 | VAC7_YEAST (P53950) Vacuolar segregation protein 7 | 29 | 3.8 | 5 | UREE_YERIN (Q6UR59) Urease accessory protein ureE | 28 | 4.9 | 6 | RCNA_SALPA (Q5PEQ4) Nickel/cobalt efflux system rcnA | 28 | 6.4 |
|---|
>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed| Length = 596 Score = 30.4 bits (67), Expect = 1.3 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +3 Query: 69 NHQEPKHSQDHNHTHAQHSTSTVITQQL*PPSSLT 173 +HQ P H Q +H H QH + Q PP+S++ Sbjct: 94 HHQHPHHHQLPHHPHHQHHPQQQPSPQTSPPASIS 128
>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)| Length = 1206 Score = 30.0 bits (66), Expect = 1.7 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = +3 Query: 60 AGINHQEPKHSQDHNHTHAQHSTSTVITQQ 149 AG +H +P H H+H H QH QQ Sbjct: 298 AGSHHHQPHHHHHHHHHHHQHHNHQQQQQQ 327
>UREE_YERPS (P52317) Urease accessory protein ureE| Length = 231 Score = 29.3 bits (64), Expect = 2.9 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = +3 Query: 51 IHLAGINHQEPKHSQDHNHTHAQH 122 IH G H H DH+H+H H Sbjct: 202 IHSHGEGHSHGDHDHDHSHSHGDH 225
>VAC7_YEAST (P53950) Vacuolar segregation protein 7| Length = 1165 Score = 28.9 bits (63), Expect = 3.8 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +1 Query: 22 GKNISNHQSSYI*QASTIKNQSTAKITTTHTHNIALAPLLHNNSDPQAHSRSKTGS 189 GKN N +S I ST STA + +T A + +N+D +++ KT S Sbjct: 321 GKNERNDDTSKICTTSTKTAPSTAPLGSTDNTQALTASVSSSNADNHNNNKKKTSS 376
>UREE_YERIN (Q6UR59) Urease accessory protein ureE| Length = 226 Score = 28.5 bits (62), Expect = 4.9 Identities = 9/26 (34%), Positives = 15/26 (57%) Frame = +3 Query: 51 IHLAGINHQEPKHSQDHNHTHAQHST 128 +H+ I+ HS DH+H+H H + Sbjct: 197 LHIHSIHSHGDGHSHDHDHSHGDHDS 222
>RCNA_SALPA (Q5PEQ4) Nickel/cobalt efflux system rcnA| Length = 274 Score = 28.1 bits (61), Expect = 6.4 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +3 Query: 57 LAGINHQEPKHSQDHNHTHAQH 122 LAG +H + H DH+H H H Sbjct: 117 LAGNHHHDHDHDHDHDHDHHGH 138 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,943,266 Number of Sequences: 219361 Number of extensions: 410397 Number of successful extensions: 1418 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1256 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1383 length of database: 80,573,946 effective HSP length: 51 effective length of database: 69,386,535 effective search space used: 1665276840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)