| Clone Name | rbast58h07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP002004.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-693N9, complete sequence Length = 172081 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 155 attacacagtgatatatgacct 176 |||||||||||||||||||||| Sbjct: 148689 attacacagtgatatatgacct 148710
>emb|AL773547.6| Mouse DNA sequence from clone RP23-243E14 on chromosome X, complete sequence Length = 161816 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 caatataaattctgtaccaatt 39 |||||||||||||||||||||| Sbjct: 63636 caatataaattctgtaccaatt 63657
>gb|AC166111.4| Mus musculus BAC clone RP23-68O7 from chromosome 1, complete sequence Length = 185692 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 caatataaattctgtaccaat 38 ||||||||||||||||||||| Sbjct: 144975 caatataaattctgtaccaat 144995
>gb|AC161253.2| Mus musculus BAC clone RP24-165J6 from chromosome 12, complete sequence Length = 156976 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 caatataaattctgtaccaat 38 ||||||||||||||||||||| Sbjct: 145454 caatataaattctgtaccaat 145434
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 catttcttgggtaaaaaactg 115 ||||||||||||||||||||| Sbjct: 30276636 catttcttgggtaaaaaactg 30276656
>gb|AC019129.8| Homo sapiens BAC clone RP11-559M23 from 2, complete sequence Length = 172611 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 agcaatgaattacacagtgat 167 ||||||||||||||||||||| Sbjct: 121429 agcaatgaattacacagtgat 121409
>gb|AC108391.14| Mus musculus chromosome 1, clone RP23-16N14, complete sequence Length = 257730 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 caatataaattctgtaccaat 38 ||||||||||||||||||||| Sbjct: 99028 caatataaattctgtaccaat 99048
>emb|AL954379.17| Mouse DNA sequence from clone RP24-162K15 on chromosome 4, complete sequence Length = 72483 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 caatataaattctgtaccaat 38 ||||||||||||||||||||| Sbjct: 53767 caatataaattctgtaccaat 53787
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12, complete sequence Length = 186142 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 catttcttgggtaaaaaactg 115 ||||||||||||||||||||| Sbjct: 172949 catttcttgggtaaaaaactg 172969
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 catttcttgggtaaaaaactg 115 ||||||||||||||||||||| Sbjct: 26532 catttcttgggtaaaaaactg 26552
>gb|AC165954.3| Mus musculus BAC clone RP23-450F5 from chromosome 12, complete sequence Length = 184826 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 caatataaattctgtaccaat 38 ||||||||||||||||||||| Sbjct: 121515 caatataaattctgtaccaat 121535
>gb|AC022062.10| Mus musculus chromosome 5, clone RP23-57P23, complete sequence Length = 235363 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgaactggagaacatttctt 102 |||||||||||||||||||| Sbjct: 123197 tgaactggagaacatttctt 123178
>gb|AC118928.13| Mus musculus chromosome 16, clone RP23-416J10, complete sequence Length = 238516 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 aatataaattctgtaccaat 38 |||||||||||||||||||| Sbjct: 224216 aatataaattctgtaccaat 224197
>gb|AC154606.2| Mus musculus BAC clone RP23-252E10 from chromosome 16, complete sequence Length = 181697 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aatataaattctgtaccaat 38 |||||||||||||||||||| Sbjct: 127516 aatataaattctgtaccaat 127535
>emb|BX324117.16| Mouse DNA sequence from clone RP23-389N3 on chromosome X, complete sequence Length = 155139 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aatataaattctgtaccaat 38 |||||||||||||||||||| Sbjct: 34837 aatataaattctgtaccaat 34856
>gb|AC141209.11| Mus musculus chromosome 3, clone RP23-199M5, complete sequence Length = 192274 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 atataaattctgtaccaatt 39 |||||||||||||||||||| Sbjct: 34631 atataaattctgtaccaatt 34612
>emb|CR974485.12| Mouse DNA sequence from clone RP23-112H14 on chromosome 12, complete sequence Length = 219570 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 caatataaattctgtaccaa 37 |||||||||||||||||||| Sbjct: 184040 caatataaattctgtaccaa 184059 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,254,587 Number of Sequences: 3902068 Number of extensions: 2254587 Number of successful extensions: 39888 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 39855 Number of HSP's gapped (non-prelim): 33 length of query: 248 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 226 effective length of database: 17,147,199,772 effective search space: 3875267148472 effective search space used: 3875267148472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)