ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast58f02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472430.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 236 bits (119), Expect = 5e-59 Identities = 149/159 (93%) Strand = Plus / Minus Query: 259 gccgcccaccgtggcgctcatggcgaaggcgccgccgacggagccgccgctggcggagag 318 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 594 gccgcccgccgtggcgctcatggcgaaggcgccgccgacgttgccgccgctggcggcgag 535 Query: 319 cagcgcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 378 ||| || ||||| ||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 534 cagggccgggcacgtgacgaagaggtggtagccgccggagacccagctgccgaccttcca 475 Query: 379 cttgacgcggccgtccaccttgacgtgcagcagcacgta 417 ||||||||||||||||||||||||||||||||||||||| Sbjct: 474 cttgacgcggccgtccaccttgacgtgcagcagcacgta 436 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 202 tcacacgtcgacggtgcagtaggacggctgcgtgaacttgagcgagacggt 252 |||||||||||||||||||| | || ||||| |||||||||||||||||| Sbjct: 663 tcacacgtcgacggtgcagtccgccgcctgcgcgaacttgagcgagacggt 613
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 236 bits (119), Expect = 5e-59 Identities = 149/159 (93%) Strand = Plus / Plus Query: 259 gccgcccaccgtggcgctcatggcgaaggcgccgccgacggagccgccgctggcggagag 318 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 23051 gccgcccgccgtggcgctcatggcgaaggcgccgccgacgttgccgccgctggcggcgag 23110 Query: 319 cagcgcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 378 ||| || ||||| ||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 23111 cagggccgggcacgtgacgaagaggtggtagccgccggagacccagctgccgaccttcca 23170 Query: 379 cttgacgcggccgtccaccttgacgtgcagcagcacgta 417 ||||||||||||||||||||||||||||||||||||||| Sbjct: 23171 cttgacgcggccgtccaccttgacgtgcagcagcacgta 23209 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 202 tcacacgtcgacggtgcagtaggacggctgcgtgaacttgagcgagacggt 252 |||||||||||||||||||| | || ||||| |||||||||||||||||| Sbjct: 22982 tcacacgtcgacggtgcagtccgccgcctgcgcgaacttgagcgagacggt 23032 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 ttattctgcacagattcagaa 63 ||||||||||||||||||||| Sbjct: 22765 ttattctgcacagattcagaa 22785
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence Length = 116952 Score = 236 bits (119), Expect = 5e-59 Identities = 149/159 (93%) Strand = Plus / Plus Query: 259 gccgcccaccgtggcgctcatggcgaaggcgccgccgacggagccgccgctggcggagag 318 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 99345 gccgcccgccgtggcgctcatggcgaaggcgccgccgacgttgccgccgctggcggcgag 99404 Query: 319 cagcgcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 378 ||| || ||||| ||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 99405 cagggccgggcacgtgacgaagaggtggtagccgccggagacccagctgccgaccttcca 99464 Query: 379 cttgacgcggccgtccaccttgacgtgcagcagcacgta 417 ||||||||||||||||||||||||||||||||||||||| Sbjct: 99465 cttgacgcggccgtccaccttgacgtgcagcagcacgta 99503 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 202 tcacacgtcgacggtgcagtaggacggctgcgtgaacttgagcgagacggt 252 |||||||||||||||||||| | || ||||| |||||||||||||||||| Sbjct: 99276 tcacacgtcgacggtgcagtccgccgcctgcgcgaacttgagcgagacggt 99326 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 ttattctgcacagattcagaa 63 ||||||||||||||||||||| Sbjct: 99059 ttattctgcacagattcagaa 99079
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 236 bits (119), Expect = 5e-59 Identities = 149/159 (93%) Strand = Plus / Plus Query: 259 gccgcccaccgtggcgctcatggcgaaggcgccgccgacggagccgccgctggcggagag 318 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 20588717 gccgcccgccgtggcgctcatggcgaaggcgccgccgacgttgccgccgctggcggcgag 20588776 Query: 319 cagcgcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 378 ||| || ||||| ||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 20588777 cagggccgggcacgtgacgaagaggtggtagccgccggagacccagctgccgaccttcca 20588836 Query: 379 cttgacgcggccgtccaccttgacgtgcagcagcacgta 417 ||||||||||||||||||||||||||||||||||||||| Sbjct: 20588837 cttgacgcggccgtccaccttgacgtgcagcagcacgta 20588875 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 202 tcacacgtcgacggtgcagtaggacggctgcgtgaacttgagcgagacggt 252 |||||||||||||||||||| | || ||||| |||||||||||||||||| Sbjct: 20588648 tcacacgtcgacggtgcagtccgccgcctgcgcgaacttgagcgagacggt 20588698 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Plus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 378 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 35046594 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 35046649 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 ttattctgcacagattcagaa 63 ||||||||||||||||||||| Sbjct: 20588431 ttattctgcacagattcagaa 20588451
>dbj|AK068271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013139L19, full insert sequence Length = 1055 Score = 236 bits (119), Expect = 5e-59 Identities = 149/159 (93%) Strand = Plus / Minus Query: 259 gccgcccaccgtggcgctcatggcgaaggcgccgccgacggagccgccgctggcggagag 318 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 722 gccgcccgccgtggcgctcatggcgaaggcgccgccgacgttgccgccgctggcggcgag 663 Query: 319 cagcgcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 378 ||| || ||||| ||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 662 cagggccgggcacgtgacgaagaggtggtagccgccggagacccagctgccgaccttcca 603 Query: 379 cttgacgcggccgtccaccttgacgtgcagcagcacgta 417 ||||||||||||||||||||||||||||||||||||||| Sbjct: 602 cttgacgcggccgtccaccttgacgtgcagcagcacgta 564 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 202 tcacacgtcgacggtgcagtaggacggctgcgtgaacttgagcgagacggt 252 |||||||||||||||||||| | || ||||| |||||||||||||||||| Sbjct: 791 tcacacgtcgacggtgcagtccgccgcctgcgcgaacttgagcgagacggt 741 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 ttattctgcacagattcagaa 63 ||||||||||||||||||||| Sbjct: 1001 ttattctgcacagattcagaa 981
>gb|AY108115.1| Zea mays PCO094434 mRNA sequence Length = 1184 Score = 170 bits (86), Expect = 2e-39 Identities = 107/114 (93%) Strand = Plus / Minus Query: 304 gccgctggcggagagcagcgcggggcagttgacgaagatgtggtagccgccagagaccca 363 |||||||| || |||||||||||||||||||||||||| |||||||| ||| |||||||| Sbjct: 760 gccgctggtggcgagcagcgcggggcagttgacgaagaggtggtagctgcccgagaccca 701 Query: 364 gctgccgaccttccacttgacgcggccgtccaccttgacgtgcagcagcacgta 417 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 700 gctgccgaccttccacttgacgcggccgtccaccctgacgtggagcagcacgta 647 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 201 ctcacacgtcgacggtgcagtaggacggctgcgtgaacttgagcgagacggt 252 ||||||||||||||||||||| || ||| |||||||||||||| |||||||| Sbjct: 890 ctcacacgtcgacggtgcagtcggccgggtgcgtgaacttgagggagacggt 839
>gb|AY107482.1| Zea mays PCO119066 mRNA sequence Length = 1052 Score = 141 bits (71), Expect = 2e-30 Identities = 92/99 (92%) Strand = Plus / Minus Query: 311 gcggagagcagcgcggggcagttgacgaagatgtggtagccgccagagacccagctgccg 370 |||||||||| ||||||||| ||||||||| |||||||| ||| ||||||||||||||| Sbjct: 729 gcggagagcacggcggggcagctgacgaagaggtggtagctgccggagacccagctgccg 670 Query: 371 accttccacttgacgcggccgtccaccttgacgtgcagc 409 |||||||||||||||||||||||||||||||| |||||| Sbjct: 669 accttccacttgacgcggccgtccaccttgacctgcagc 631
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 109 bits (55), Expect = 7e-21 Identities = 79/87 (90%) Strand = Plus / Plus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 382 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 19974372 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 19974431 Query: 383 acgcggccgtccaccttgacgtgcagc 409 ||||||||||| ||||| || |||||| Sbjct: 19974432 acgcggccgtcgaccttcacctgcagc 19974458 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 cgaaggcgccgccgacggagccgc 305 ||||||||| |||||||||||||| Sbjct: 27377743 cgaaggcgcggccgacggagccgc 27377766
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 109 bits (55), Expect = 7e-21 Identities = 79/87 (90%) Strand = Plus / Plus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 382 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 151973 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 152032 Query: 383 acgcggccgtccaccttgacgtgcagc 409 ||||||||||| ||||| || |||||| Sbjct: 152033 acgcggccgtcgaccttcacctgcagc 152059
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 109 bits (55), Expect = 7e-21 Identities = 79/87 (90%) Strand = Plus / Plus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 382 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 78493 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 78552 Query: 383 acgcggccgtccaccttgacgtgcagc 409 ||||||||||| ||||| || |||||| Sbjct: 78553 acgcggccgtcgaccttcacctgcagc 78579
>dbj|AK109402.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G02, full insert sequence Length = 1071 Score = 109 bits (55), Expect = 7e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 382 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 673 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 614 Query: 383 acgcggccgtccaccttgacgtgcagc 409 ||||||||||| ||||| || |||||| Sbjct: 613 acgcggccgtcgaccttcacctgcagc 587
>dbj|AK109400.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D03, full insert sequence Length = 1051 Score = 109 bits (55), Expect = 7e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 382 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 652 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 593 Query: 383 acgcggccgtccaccttgacgtgcagc 409 ||||||||||| ||||| || |||||| Sbjct: 592 acgcggccgtcgaccttcacctgcagc 566
>dbj|AK104564.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D10, full insert sequence Length = 906 Score = 109 bits (55), Expect = 7e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 382 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 620 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 561 Query: 383 acgcggccgtccaccttgacgtgcagc 409 ||||||||||| ||||| || |||||| Sbjct: 560 acgcggccgtcgaccttcacctgcagc 534
>dbj|AK065946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049G21, full insert sequence Length = 1007 Score = 109 bits (55), Expect = 7e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 382 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 621 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 562 Query: 383 acgcggccgtccaccttgacgtgcagc 409 ||||||||||| ||||| || |||||| Sbjct: 561 acgcggccgtcgaccttcacctgcagc 535
>dbj|AK061396.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-E05, full insert sequence Length = 1051 Score = 109 bits (55), Expect = 7e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 382 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 652 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 593 Query: 383 acgcggccgtccaccttgacgtgcagc 409 ||||||||||| ||||| || |||||| Sbjct: 592 acgcggccgtcgaccttcacctgcagc 566
>dbj|AK060001.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G10, full insert sequence Length = 940 Score = 109 bits (55), Expect = 7e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 382 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 649 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 590 Query: 383 acgcggccgtccaccttgacgtgcagc 409 ||||||||||| ||||| || |||||| Sbjct: 589 acgcggccgtcgaccttcacctgcagc 563
>dbj|AK104600.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G02, full insert sequence Length = 988 Score = 101 bits (51), Expect = 2e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 382 ||||||||| |||| |||| |||||||| ||| |||||||||||||||||||||||| || Sbjct: 652 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacctg 593 Query: 383 acgcggccgtccaccttgacgtgcagc 409 ||||||||||| ||||| || |||||| Sbjct: 592 acgcggccgtcgaccttcacctgcagc 566
>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0076K20, complete sequence Length = 127338 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 5239 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 5180 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 5179 cggccgtcgatcttgac 5163
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 1366 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 1425 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 1426 cggccgtcgatcttgac 1442
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 2979160 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 2979219 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 2979220 cggccgtcgatcttgac 2979236
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 2721559 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 2721618 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 2721619 cggccgtcgatcttgac 2721635
>dbj|AK119781.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F02, full insert sequence Length = 990 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 711 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 652 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 651 cggccgtcgatcttgac 635
>dbj|AK106091.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B08, full insert sequence Length = 1020 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 715 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 656 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 655 cggccgtcgatcttgac 639
>dbj|AK104479.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-F10, full insert sequence Length = 994 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 715 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 656 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 655 cggccgtcgatcttgac 639
>dbj|AK104466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C09, full insert sequence Length = 1020 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 715 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 656 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 655 cggccgtcgatcttgac 639
>dbj|AK104372.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E09, full insert sequence Length = 994 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 715 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 656 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 655 cggccgtcgatcttgac 639
>dbj|AK104217.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C11, full insert sequence Length = 1020 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 715 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 656 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 655 cggccgtcgatcttgac 639
>dbj|AK104185.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D07, full insert sequence Length = 1021 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 618 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 559 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 558 cggccgtcgatcttgac 542
>dbj|AK070481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048L05, full insert sequence Length = 1056 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 742 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 683 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 682 cggccgtcgatcttgac 666
>dbj|AK070326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052I16, full insert sequence Length = 1026 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 716 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 657 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 656 cggccgtcgatcttgac 640
>dbj|AK061582.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-H12, full insert sequence Length = 1034 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 631 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 572 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 571 cggccgtcgatcttgac 555
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 2730590 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 2730649 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 2730650 cggccgtcgatcttgac 2730666
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 2979104 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 2979163 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 2979164 cggccgtcgatcttgac 2979180
>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145661 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 326 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 385 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 36942 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 36883 Query: 386 cggccgtccaccttgac 402 |||||||| | |||||| Sbjct: 36882 cggccgtcgatcttgac 36866
>ref|XM_474420.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Minus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 378 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 557 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 502
>dbj|AK103610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133J15, full insert sequence Length = 1420 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Minus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 378 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 970 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 915
>dbj|AK069353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014D16, full insert sequence Length = 1024 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Minus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 378 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 593 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 538
>dbj|AK061257.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B04, full insert sequence Length = 1027 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Minus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 378 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 596 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 541
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Plus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 378 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 1262 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 1317
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Plus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 378 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 78262 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 78317
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Plus Query: 323 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 378 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 105641 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 105696
>emb|BX649534.9| Zebrafish DNA sequence from clone DKEY-31F5 in linkage group 4, complete sequence Length = 205347 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Minus Query: 81 gtgataattatacactatcatatcatg 107 ||||||||||||||||| ||||||||| Sbjct: 46568 gtgataattatacactaacatatcatg 46542
>ref|NM_190382.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1419 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 286 ggcgccgccgacggagccgccgctggcggagagc 319 ||||||| ||||| ||||||| |||||||||||| Sbjct: 1179 ggcgccgacgacgaagccgcccctggcggagagc 1212
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 286 ggcgccgccgacggagccgccgctggcggagagc 319 ||||||| ||||| ||||||| |||||||||||| Sbjct: 35161469 ggcgccgacgacgaagccgcccctggcggagagc 35161436
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 286 ggcgccgccgacggagccgccgctggcggagagc 319 ||||||| ||||| ||||||| |||||||||||| Sbjct: 40553 ggcgccgacgacgaagccgcccctggcggagagc 40520
>dbj|AK064237.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A08, full insert sequence Length = 1529 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 286 ggcgccgccgacggagccgccgctggcggagagc 319 ||||||| ||||| ||||||| |||||||||||| Sbjct: 920 ggcgccgacgacgaagccgcccctggcggagagc 953
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 277 catggcgaaggcgccgccgacggag 301 ||||||||||||||||||| ||||| Sbjct: 5249 catggcgaaggcgccgccgtcggag 5273
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 taatacgatgtataaaaagta 36 ||||||||||||||||||||| Sbjct: 14816715 taatacgatgtataaaaagta 14816735
>emb|AJ862840.1| Streptomyces griseus subsp. griseus streptomycin gene cluster, strain DSM 40236 Length = 90600 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 280 ggcgaaggcgccgccgacggagccg 304 |||||||||||||||| |||||||| Sbjct: 87687 ggcgaaggcgccgccggcggagccg 87663
>gb|AC010040.6| Drosophila melanogaster 3L BAC RP98-13E21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 159672 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 ctcctgcaaataattaagagc 149 ||||||||||||||||||||| Sbjct: 68733 ctcctgcaaataattaagagc 68753
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 taatacgatgtataaaaagta 36 ||||||||||||||||||||| Sbjct: 116053 taatacgatgtataaaaagta 116033
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 277 catggcgaaggcgccgccgacggag 301 ||||||||||||||||||| ||||| Sbjct: 21548623 catggcgaaggcgccgccgtcggag 21548647 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 277 catggcgaaggcgccgccgacggag 301 ||||||||||||||||||| ||||| Sbjct: 21540115 catggcgaaggcgccgccgtcggag 21540091 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 277 catggcgaaggcgccgccgacggag 301 ||||||||||||||||||| ||||| Sbjct: 21463809 catggcgaaggcgccgccgtcggag 21463833
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 taatacgatgtataaaaagta 36 ||||||||||||||||||||| Sbjct: 14811249 taatacgatgtataaaaagta 14811269
>gb|AC164651.3| Ornithorhynchus anatinus BAC clone OABb-375A1 from chromosome unknown, complete sequence Length = 183178 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 ttctgcacagattcagaaaca 66 ||||||||||||||||||||| Sbjct: 38860 ttctgcacagattcagaaaca 38880
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0489D11 Length = 150757 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 277 catggcgaaggcgccgccgacggag 301 ||||||||||||||||||| ||||| Sbjct: 110233 catggcgaaggcgccgccgtcggag 110257 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 277 catggcgaaggcgccgccgacggag 301 ||||||||||||||||||| ||||| Sbjct: 101725 catggcgaaggcgccgccgtcggag 101701 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 277 catggcgaaggcgccgccgacggag 301 ||||||||||||||||||| ||||| Sbjct: 25419 catggcgaaggcgccgccgtcggag 25443
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 277 catggcgaaggcgccgccgacggag 301 ||||||||||||||||||| ||||| Sbjct: 80914 catggcgaaggcgccgccgtcggag 80938
>gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29 of 83 of the complete sequence Length = 281917 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 ctcctgcaaataattaagagc 149 ||||||||||||||||||||| Sbjct: 255847 ctcctgcaaataattaagagc 255867
>gb|AC133465.12| Mus musculus chromosome 1, clone RP24-469B15, complete sequence Length = 166435 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 aaaagtagtagcattattct 49 |||||||||||||||||||| Sbjct: 148644 aaaagtagtagcattattct 148663
>gb|AC157562.8| Mus musculus chromosome 1, clone RP24-304A3, complete sequence Length = 120189 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 aaaagtagtagcattattct 49 |||||||||||||||||||| Sbjct: 2411 aaaagtagtagcattattct 2430
>gb|BT018714.1| Zea mays clone EL01N0517A06.d mRNA sequence Length = 1863 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ggcgctcatggcgaaggcgc 290 |||||||||||||||||||| Sbjct: 333 ggcgctcatggcgaaggcgc 314
>gb|CP000119.1| Anabaena variabilis ATCC 29413 plasmid A, complete sequence Length = 366354 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gtagcattattctgcacagattca 60 |||||||| ||||||||||||||| Sbjct: 216615 gtagcattgttctgcacagattca 216638
>ref|XM_843467.1| PREDICTED: Canis familiaris similar to Tumor necrosis factor receptor superfamily member 18 precursor (Glucocorticoid-induced TNFR-related protein) (Activation-inducible TNFR family receptor) (LOC606971), mRNA Length = 684 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gccgccagagacccagctgc 368 |||||||||||||||||||| Sbjct: 552 gccgccagagacccagctgc 571
>gb|AE005850.1| Caulobacter crescentus CB15 section 176 of 359 of the complete genome Length = 11211 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 ctgccgaccttccacttgac 384 |||||||||||||||||||| Sbjct: 8940 ctgccgaccttccacttgac 8959
>gb|AE012165.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 73 of 460 of the complete genome Length = 11416 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 aggcgccgccgacggagccgccgc 308 ||||||||||||||| |||||||| Sbjct: 8732 aggcgccgccgacggtgccgccgc 8755
>gb|AC093416.2| Homo sapiens chromosome 3 clone RP11-659P16, complete sequence Length = 189308 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 gatgtataaaaagtagtagcatta 45 |||||||||||| ||||||||||| Sbjct: 141663 gatgtataaaaaatagtagcatta 141640
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctgcttgccgcccaccgtgg 272 |||||||||||||||||||| Sbjct: 1415469 ctgcttgccgcccaccgtgg 1415488
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 aggcgccgccgacggagccgccgc 308 ||||||||||||||| |||||||| Sbjct: 4232795 aggcgccgccgacggtgccgccgc 4232772
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 ccgtccaccttgacgtgcag 408 |||||||||||||||||||| Sbjct: 1599654 ccgtccaccttgacgtgcag 1599635
>gb|AC127279.3| Mus musculus BAC clone RP24-247K4 from chromosome 10, complete sequence Length = 185573 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 aattatacactatcatatca 105 |||||||||||||||||||| Sbjct: 42350 aattatacactatcatatca 42331
>gb|AC155880.3| Medicago truncatula chromosome 2 BAC clone mte1-55i22, complete sequence Length = 118734 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tagcattattctgcacagat 57 |||||||||||||||||||| Sbjct: 96427 tagcattattctgcacagat 96446
>gb|M81648.1|XANXPSDMN Xanthomonas campestris campestris XpsM (xpsM), XpsN (xpsN), and XpsD precursor (xpsD) genes, complete cds Length = 4832 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 aggcgccgccgacggagccgccgc 308 ||||||||||||||| |||||||| Sbjct: 1951 aggcgccgccgacggtgccgccgc 1974
>dbj|AP004160.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1197_E09 Length = 67368 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 cgaaggcgccgccgacggagccgc 305 ||||||||| |||||||||||||| Sbjct: 23681 cgaaggcgcggccgacggagccgc 23704
>dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1493_H11 Length = 106693 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 cgaaggcgccgccgacggagccgc 305 ||||||||| |||||||||||||| Sbjct: 92676 cgaaggcgcggccgacggagccgc 92699
>dbj|AK110845.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-B11, full insert sequence Length = 2070 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 cgaaggcgccgccgacggagccgc 305 ||||||||| |||||||||||||| Sbjct: 411 cgaaggcgcggccgacggagccgc 388
>dbj|AK109266.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-185-B07, full insert sequence Length = 842 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 cgaaggcgccgccgacggagccgc 305 ||||||||| |||||||||||||| Sbjct: 408 cgaaggcgcggccgacggagccgc 385
>gb|AC130216.4| Mus musculus BAC clone RP23-218G9 from 10, complete sequence Length = 182204 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aattatacactatcatatca 105 |||||||||||||||||||| Sbjct: 20105 aattatacactatcatatca 20124
>emb|BX548062.37| Zebrafish DNA sequence from clone CH211-223K23 in linkage group 20, complete sequence Length = 89039 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ataattatacactatcatatcatg 107 ||||||||||| |||||||||||| Sbjct: 22065 ataattatacattatcatatcatg 22088
>emb|BX537358.5| Zebrafish DNA sequence from clone DKEY-98L9 in linkage group 4, complete sequence Length = 230105 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ataattatacactatcatatcatg 107 |||||||||||||| ||||||||| Sbjct: 23419 ataattatacactaacatatcatg 23396
>emb|CT030245.8| M.truncatula DNA sequence from clone MTH2-59B18 on chromosome 3, complete sequence Length = 128436 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tagcattattctgcacagat 57 |||||||||||||||||||| Sbjct: 40197 tagcattattctgcacagat 40216 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,867,340 Number of Sequences: 3902068 Number of extensions: 2867340 Number of successful extensions: 85107 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84513 Number of HSP's gapped (non-prelim): 594 length of query: 419 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 397 effective length of database: 17,147,199,772 effective search space: 6807438309484 effective search space used: 6807438309484 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
