| Clone Name | rbast58d11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PTK2_YEAST (P47116) Serine/threonine-protein kinase PTK2/STK2 (E... | 29 | 2.7 | 2 | MODB_RHOCA (Q08382) Molybdenum transport system permease protein... | 28 | 7.8 | 3 | NCOA2_MOUSE (Q61026) Nuclear receptor coactivator 2 (NCoA-2) (Tr... | 28 | 7.8 |
|---|
>PTK2_YEAST (P47116) Serine/threonine-protein kinase PTK2/STK2 (EC 2.7.11.1)| Length = 818 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -3 Query: 285 DLTAKASRGIASSQPATPTGRGPTASPA 202 D T K + + +S P TPT GPT PA Sbjct: 714 DSTMKELKSMLNSTPTTPTHNGPTPLPA 741
>MODB_RHOCA (Q08382) Molybdenum transport system permease protein modB| Length = 228 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +2 Query: 212 AVGPRPVGVAGWLDAIPRDAF 274 A+GPRP+ VA L A P DAF Sbjct: 117 AMGPRPMEVAATLRASPLDAF 137
>NCOA2_MOUSE (Q61026) Nuclear receptor coactivator 2 (NCoA-2) (Transcriptional| intermediary factor 2) (Glucocorticoid receptor-interacting protein 1) (GRIP-1) Length = 1462 Score = 27.7 bits (60), Expect = 7.8 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -3 Query: 261 GIASSQPATPTGRGPTASPATRCSCPKST 175 G ++S+P+ P+G SPA R +C +T Sbjct: 941 GSSTSRPSMPSGEWAPQSPAVRVTCAATT 969 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,783,880 Number of Sequences: 219361 Number of extensions: 827013 Number of successful extensions: 2475 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2389 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2475 length of database: 80,573,946 effective HSP length: 71 effective length of database: 64,999,315 effective search space used: 1559983560 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)