ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast58b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_452296.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C02233g ... 40 1.9
2gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 1.9
3emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 1.9
4gb|AC004805.1| Homo sapiens Chromosome 17 BAC GS1-531I17 (Genome... 40 1.9
5emb|BX936107.1| Gallus gallus finished cDNA, clone ChEST489l1 40 1.9
6emb|BX930464.1| Gallus gallus finished cDNA, clone ChEST636o24 40 1.9
7gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome... 38 7.6
8gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosom... 38 7.6
9gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome... 38 7.6
10gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genom... 38 7.6
11ref|XM_865033.1| PREDICTED: Bos taurus similar to phospholipase ... 38 7.6
12ref|XM_874846.1| PREDICTED: Bos taurus similar to phospholipase ... 38 7.6
13ref|XM_582468.2| PREDICTED: Bos taurus similar to phospholipase ... 38 7.6
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 7.6
15gb|AC125456.4| Mus musculus BAC clone RP24-193M20 from chromosom... 38 7.6
16gb|AC121914.3| Mus musculus BAC clone RP24-186A10 from chromosom... 38 7.6
17gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 38 7.6
18gb|BC006621.1| Mus musculus RIKEN cDNA 2810403A07 gene, mRNA (cD... 38 7.6
19gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome... 38 7.6
20gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno... 38 7.6
21dbj|AK170490.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 38 7.6
22dbj|AK012969.1| Mus musculus 10, 11 days embryo whole body cDNA,... 38 7.6
23gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 38 7.6
24dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.6
25dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.6
26dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.6
27dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.6
28dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.6
29dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.6
30gb|AC007760.6|AC007760 Drosophila melanogaster, chromosome 3R, r... 38 7.6
31gb|AC007647.6|AC007647 Drosophila melanogaster, chromosome 3R, r... 38 7.6
32dbj|AP005243.4| Oryza sativa (japonica cultivar-group) genomic D... 38 7.6
33dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic D... 38 7.6
34dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic D... 38 7.6
35dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.6
36dbj|AK173057.1| Mus musculus mRNA for mKIAA0907 protein 38 7.6
37dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.6
38gb|AE003712.1| Drosophila melanogaster chromosome 3R, section 50... 38 7.6
39gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 38 7.6
40dbj|AB042956.1| Nicotiana tabacum NtPT4 mRNA for phosphate trans... 38 7.6
41dbj|AB042951.1| Nicotiana tabacum NtPT3 mRNA for phosphate trans... 38 7.6
42gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 7.6
43gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 7.6
44emb|AJ429228.1|BSU429228 Bacillus subtilis plasmid pBS4 partial ... 38 7.6
45emb|AJ429227.1|BSU429227 Bacillus subtilis plasmid pBS12 partial... 38 7.6
46emb|AJ429226.1|BSU429226 Bacillus subtilis plasmid pBS8 partial ... 38 7.6
47emb|AJ429224.1|BMO429224 Bacillus mojavensis plasmid pBM18 rep gene 38 7.6
48emb|AJ429223.1|BMO429223 Bacillus mojavensis plasmid pBM17 rep gene 38 7.6
49emb|AJ429222.1|BMO429222 Bacillus mojavensis plasmid pBM16 rep gene 38 7.6
50emb|AJ429221.1|BMO429221 Bacillus mojavensis plasmid pBM15 rep gene 38 7.6
51emb|AJ429220.1|BMO429220 Bacillus mojavensis plasmid pBM14 rep gene 38 7.6
52emb|AJ429218.1|BMO429218 Bacillus mojavensis plasmid pBM11 rep gene 38 7.6
53emb|AJ429189.1|BMO429189 Bacillus mojavenis plasmid pBM5 rep gene 38 7.6
54emb|AJ429188.1|BMO429188 Bacillus mojavensis plasmid pBM3 rep gene 38 7.6
55gb|AC134246.4| Mus musculus BAC clone RP23-199B2 from 3, complet... 38 7.6
56ref|NM_028814.1| Mus musculus RIKEN cDNA 2810403A07 gene (281040... 38 7.6 
>ref|XM_452296.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C02233g predicted mRNA
          Length = 1467

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 123 aaatccacgacgccaactttaaac 146
           ||||||| ||||||||||||||||
Sbjct: 397 aaatccaggacgccaactttaaac 420
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 52      acaacatacaaggagactac 71
               ||||||||||||||||||||
Sbjct: 2262894 acaacatacaaggagactac 2262913
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>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1753957

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 123    aaatccacgacgccaactttaaac 146
              ||||||| ||||||||||||||||
Sbjct: 185978 aaatccaggacgccaactttaaac 185955
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>gb|AC004805.1| Homo sapiens Chromosome 17 BAC GS1-531I17 (Genome Systems Human BAC
             Library) complete sequence
          Length = 184263

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   gacgccaactttaaacacat 150
             ||||||||||||||||||||
Sbjct: 99045 gacgccaactttaaacacat 99026
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>emb|BX936107.1| Gallus gallus finished cDNA, clone ChEST489l1
          Length = 905

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 19  attcttcagttatctctaaa 38
           ||||||||||||||||||||
Sbjct: 484 attcttcagttatctctaaa 465
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>emb|BX930464.1| Gallus gallus finished cDNA, clone ChEST636o24
          Length = 597

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 19  attcttcagttatctctaaa 38
           ||||||||||||||||||||
Sbjct: 513 attcttcagttatctctaaa 494
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>gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0032M21 map C83B, complete sequence
          Length = 48636

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 135   ccaactttaaacacatcag 153
             |||||||||||||||||||
Sbjct: 30284 ccaactttaaacacatcag 30302
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>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10
              map R2918, complete sequence
          Length = 149132

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 135    ccaactttaaacacatcag 153
              |||||||||||||||||||
Sbjct: 147984 ccaactttaaacacatcag 148002
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>gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0012A20,
              complete sequence
          Length = 131599

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 135    ccaactttaaacacatcag 153
              |||||||||||||||||||
Sbjct: 124907 ccaactttaaacacatcag 124925
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>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete
             sequence
          Length = 145590

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    aattacttacaacatacaa 62
             |||||||||||||||||||
Sbjct: 93514 aattacttacaacatacaa 93532
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>ref|XM_865033.1| PREDICTED: Bos taurus similar to phospholipase A2-activating protein
            isoform 1, transcript variant 3 (LOC506073), mRNA
          Length = 2959

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 17   tcattcttcagttatctctaaagctct 43
            |||||||| | ||||||||||||||||
Sbjct: 2859 tcattcttaatttatctctaaagctct 2833
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>ref|XM_874846.1| PREDICTED: Bos taurus similar to phospholipase A2-activating protein
            isoform 1, transcript variant 4 (LOC506073), mRNA
          Length = 2675

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 17   tcattcttcagttatctctaaagctct 43
            |||||||| | ||||||||||||||||
Sbjct: 2575 tcattcttaatttatctctaaagctct 2549
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>ref|XM_582468.2| PREDICTED: Bos taurus similar to phospholipase A2-activating protein
            isoform 1, transcript variant 2 (LOC506073), mRNA
          Length = 2651

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 17   tcattcttcagttatctctaaagctct 43
            |||||||| | ||||||||||||||||
Sbjct: 2551 tcattcttaatttatctctaaagctct 2525
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 135      ccaactttaaacacatcag 153
                |||||||||||||||||||
Sbjct: 32063319 ccaactttaaacacatcag 32063301



 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 44       aattacttacaacatacaa 62
                |||||||||||||||||||
Sbjct: 22498267 aattacttacaacatacaa 22498285
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>gb|AC125456.4| Mus musculus BAC clone RP24-193M20 from chromosome 18, complete
             sequence
          Length = 142347

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    tacttacaacatacaagga 65
             |||||||||||||||||||
Sbjct: 69312 tacttacaacatacaagga 69330
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>gb|AC121914.3| Mus musculus BAC clone RP24-186A10 from chromosome 3, complete sequence
          Length = 172937

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 83     aagcacaagtgacccatct 101
              |||||||||||||||||||
Sbjct: 126553 aagcacaagtgacccatct 126571
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 135    ccaactttaaacacatcag 153
              |||||||||||||||||||
Sbjct: 844050 ccaactttaaacacatcag 844068
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>gb|BC006621.1| Mus musculus RIKEN cDNA 2810403A07 gene, mRNA (cDNA clone MGC:7130
            IMAGE:3158104), complete cds
          Length = 2980

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 41   tctaattacttacaacatacaag 63
            |||||||| ||||||||||||||
Sbjct: 2860 tctaattatttacaacatacaag 2838
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>gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1014H12,
             complete sequence
          Length = 129420

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 135   ccaactttaaacacatcag 153
             |||||||||||||||||||
Sbjct: 92132 ccaactttaaacacatcag 92114
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>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete
             sequence
          Length = 178158

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 135   ccaactttaaacacatcag 153
             |||||||||||||||||||
Sbjct: 64444 ccaactttaaacacatcag 64426
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>dbj|AK170490.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630105K05
            product:BLOM7 alpha homolog [Homo sapiens], full insert
            sequence
          Length = 2915

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 41   tctaattacttacaacatacaag 63
            |||||||| ||||||||||||||
Sbjct: 2880 tctaattatttacaacatacaag 2858
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>dbj|AK012969.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2810403A07 product:hypothetical
            Proline-rich region containing protein, full insert
            sequence
          Length = 2965

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 41   tctaattacttacaacatacaag 63
            |||||||| ||||||||||||||
Sbjct: 2862 tctaattatttacaacatacaag 2840
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
              sequence
          Length = 4332241

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 114    aaaccaggtaaatccacga 132
              |||||||||||||||||||
Sbjct: 155561 aaaccaggtaaatccacga 155579
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 135     ccaactttaaacacatcag 153
               |||||||||||||||||||
Sbjct: 2495887 ccaactttaaacacatcag 2495905
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10,
              complete sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 135    ccaactttaaacacatcag 153
              |||||||||||||||||||
Sbjct: 844050 ccaactttaaacacatcag 844068
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 135      ccaactttaaacacatcag 153
                |||||||||||||||||||
Sbjct: 22637502 ccaactttaaacacatcag 22637484
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 135      ccaactttaaacacatcag 153
                |||||||||||||||||||
Sbjct: 28774298 ccaactttaaacacatcag 28774280
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 135     ccaactttaaacacatcag 153
               |||||||||||||||||||
Sbjct: 7574696 ccaactttaaacacatcag 7574714
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 135      ccaactttaaacacatcag 153
                |||||||||||||||||||
Sbjct: 32153831 ccaactttaaacacatcag 32153813



 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 44       aattacttacaacatacaa 62
                |||||||||||||||||||
Sbjct: 22491296 aattacttacaacatacaa 22491314
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>gb|AC007760.6|AC007760 Drosophila melanogaster, chromosome 3R, region 89B-89B, BAC clone
              BACR37I18, complete sequence
          Length = 195037

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 82     aaagcacaagtgacccatc 100
              |||||||||||||||||||
Sbjct: 162176 aaagcacaagtgacccatc 162194
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>gb|AC007647.6|AC007647 Drosophila melanogaster, chromosome 3R, region 89B-89C, BAC clone
             BACR05P04, complete sequence
          Length = 194335

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    aaagcacaagtgacccatc 100
             |||||||||||||||||||
Sbjct: 72139 aaagcacaagtgacccatc 72157
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>dbj|AP005243.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1205_F02
          Length = 112862

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 135   ccaactttaaacacatcag 153
             |||||||||||||||||||
Sbjct: 81859 ccaactttaaacacatcag 81841
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>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0690E03
          Length = 139924

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 135    ccaactttaaacacatcag 153
              |||||||||||||||||||
Sbjct: 111003 ccaactttaaacacatcag 110985
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>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0008J01
          Length = 159900

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 135   ccaactttaaacacatcag 153
             |||||||||||||||||||
Sbjct: 31984 ccaactttaaacacatcag 31966
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>dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0412C04
          Length = 146849

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 135    ccaactttaaacacatcag 153
              |||||||||||||||||||
Sbjct: 134627 ccaactttaaacacatcag 134645
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>dbj|AK173057.1| Mus musculus mRNA for mKIAA0907 protein
          Length = 3632

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 41   tctaattacttacaacatacaag 63
            |||||||| ||||||||||||||
Sbjct: 3597 tctaattatttacaacatacaag 3575
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>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:B1111C03
          Length = 144879

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 135  ccaactttaaacacatcag 153
            |||||||||||||||||||
Sbjct: 6296 ccaactttaaacacatcag 6278
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>gb|AE003712.1| Drosophila melanogaster chromosome 3R, section 50 of 118 of the complete
              sequence
          Length = 226200

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 82     aaagcacaagtgacccatc 100
              |||||||||||||||||||
Sbjct: 161588 aaagcacaagtgacccatc 161606
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130,
              chromosome I, complete sequence
          Length = 4277185

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 114    aaaccaggtaaatccacga 132
              |||||||||||||||||||
Sbjct: 154784 aaaccaggtaaatccacga 154802
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>dbj|AB042956.1| Nicotiana tabacum NtPT4 mRNA for phosphate transporter, complete cds
          Length = 1866

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 13   ctgttcattcttcagttat 31
            |||||||||||||||||||
Sbjct: 1648 ctgttcattcttcagttat 1630
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>dbj|AB042951.1| Nicotiana tabacum NtPT3 mRNA for phosphate transporter, complete cds
          Length = 1918

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 13   ctgttcattcttcagttat 31
            |||||||||||||||||||
Sbjct: 1648 ctgttcattcttcagttat 1630
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 135    ccaactttaaacacatcag 153
              |||||||||||||||||||
Sbjct: 844047 ccaactttaaacacatcag 844065
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 135     ccaactttaaacacatcag 153
               |||||||||||||||||||
Sbjct: 2504918 ccaactttaaacacatcag 2504936
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>emb|AJ429228.1|BSU429228 Bacillus subtilis plasmid pBS4 partial rep gene
          Length = 320

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 27  gttatctctaaagctctaa 45
           |||||||||||||||||||
Sbjct: 148 gttatctctaaagctctaa 130
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>emb|AJ429227.1|BSU429227 Bacillus subtilis plasmid pBS12 partial rep gene
          Length = 406

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 27  gttatctctaaagctctaa 45
           |||||||||||||||||||
Sbjct: 179 gttatctctaaagctctaa 161
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>emb|AJ429226.1|BSU429226 Bacillus subtilis plasmid pBS8 partial rep gene
          Length = 390

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 27  gttatctctaaagctctaa 45
           |||||||||||||||||||
Sbjct: 154 gttatctctaaagctctaa 136
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>emb|AJ429224.1|BMO429224 Bacillus mojavensis plasmid pBM18 rep gene
          Length = 375

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 27  gttatctctaaagctctaa 45
           |||||||||||||||||||
Sbjct: 178 gttatctctaaagctctaa 160
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>emb|AJ429223.1|BMO429223 Bacillus mojavensis plasmid pBM17 rep gene
          Length = 411

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 27  gttatctctaaagctctaa 45
           |||||||||||||||||||
Sbjct: 179 gttatctctaaagctctaa 161
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>emb|AJ429222.1|BMO429222 Bacillus mojavensis plasmid pBM16 rep gene
          Length = 450

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 27  gttatctctaaagctctaa 45
           |||||||||||||||||||
Sbjct: 213 gttatctctaaagctctaa 195
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>emb|AJ429221.1|BMO429221 Bacillus mojavensis plasmid pBM15 rep gene
          Length = 386

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 27  gttatctctaaagctctaa 45
           |||||||||||||||||||
Sbjct: 175 gttatctctaaagctctaa 157
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>emb|AJ429220.1|BMO429220 Bacillus mojavensis plasmid pBM14 rep gene
          Length = 386

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 27  gttatctctaaagctctaa 45
           |||||||||||||||||||
Sbjct: 179 gttatctctaaagctctaa 161
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>emb|AJ429218.1|BMO429218 Bacillus mojavensis plasmid pBM11 rep gene
          Length = 373

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 27  gttatctctaaagctctaa 45
           |||||||||||||||||||
Sbjct: 175 gttatctctaaagctctaa 157
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>emb|AJ429189.1|BMO429189 Bacillus mojavenis plasmid pBM5 rep gene
          Length = 426

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 27  gttatctctaaagctctaa 45
           |||||||||||||||||||
Sbjct: 169 gttatctctaaagctctaa 151
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>emb|AJ429188.1|BMO429188 Bacillus mojavensis plasmid pBM3 rep gene
          Length = 445

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 27  gttatctctaaagctctaa 45
           |||||||||||||||||||
Sbjct: 213 gttatctctaaagctctaa 195
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>gb|AC134246.4| Mus musculus BAC clone RP23-199B2 from 3, complete sequence
          Length = 206439

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 41     tctaattacttacaacatacaag 63
              |||||||| ||||||||||||||
Sbjct: 117909 tctaattatttacaacatacaag 117887
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>ref|NM_028814.1| Mus musculus RIKEN cDNA 2810403A07 gene (2810403A07Rik), mRNA
          Length = 2965

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 41   tctaattacttacaacatacaag 63
            |||||||| ||||||||||||||
Sbjct: 2862 tctaattatttacaacatacaag 2840


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,076,861
Number of Sequences: 3902068
Number of extensions: 1076861
Number of successful extensions: 70772
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70431
Number of HSP's gapped (non-prelim): 341
length of query: 158
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 136
effective length of database: 17,147,199,772
effective search space: 2332019168992
effective search space used: 2332019168992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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