ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast57g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465344.1| Oryza sativa (japonica cultivar-group), mRNA 109 3e-21
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 109 3e-21
3dbj|AP005865.3| Oryza sativa (japonica cultivar-group) genomic D... 109 3e-21
4dbj|AK067672.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 3e-21
5dbj|AK059413.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 3e-21
6ref|NM_197338.1| Oryza sativa (japonica cultivar-group) putative... 101 7e-19
7gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 gen... 101 7e-19
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 101 7e-19
9dbj|AK070291.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 7e-19
10gb|AY104979.1| Zea mays PCO112869 mRNA sequence 101 7e-19
11gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 101 7e-19
12ref|XM_517629.1| PREDICTED: Pan troglodytes chaperonin containin... 44 0.14
13ref|NM_012073.3| Homo sapiens chaperonin containing TCP1, subuni... 44 0.14
14gb|BC035499.2| Homo sapiens chaperonin containing TCP1, subunit ... 44 0.14
15dbj|D43950.2|HUMKG1DD Homo sapiens mRNA for KIAA0098 protein, pa... 44 0.14
16emb|CR626727.1| full-length cDNA clone CS0DA005YC18 of Neuroblas... 44 0.14
17emb|CR624278.1| full-length cDNA clone CS0DG004YM17 of B cells (... 44 0.14
18dbj|AK124354.1| Homo sapiens cDNA FLJ42363 fis, clone UTERU2026775 44 0.14
19emb|CR621852.1| full-length cDNA clone CS0DK006YF22 of HeLa cell... 44 0.14
20emb|CR619740.1| full-length cDNA clone CS0DA004YE17 of Neuroblas... 44 0.14
21emb|CR618337.1| full-length cDNA clone CS0DA004YN07 of Neuroblas... 44 0.14
22emb|CR617351.1| full-length cDNA clone CS0DD007YO16 of Neuroblas... 44 0.14
23emb|CR616179.1| full-length cDNA clone CS0DH002YF13 of T cells (... 44 0.14
24emb|CR611397.1| full-length cDNA clone CS0DI073YJ18 of Placenta ... 44 0.14
25emb|CR609903.1| full-length cDNA clone CS0DF037YB16 of Fetal bra... 44 0.14
26emb|CR606787.1| full-length cDNA clone CS0DG002YD05 of B cells (... 44 0.14
27emb|CR605385.1| full-length cDNA clone CS0DF030YN09 of Fetal bra... 44 0.14
28emb|CR604938.1| full-length cDNA clone CS0DE007YC17 of Placenta ... 44 0.14
29emb|CR602835.1| full-length cDNA clone CS0DH001YA09 of T cells (... 44 0.14
30emb|CR599726.1| full-length cDNA clone CL0BB007ZD11 of Neuroblas... 44 0.14
31emb|CR596856.1| full-length cDNA clone CS0DH005YD19 of T cells (... 44 0.14
32emb|CR594923.1| full-length cDNA clone CS0DM004YE20 of Fetal liv... 44 0.14
33emb|CR590360.1| full-length cDNA clone CS0DI081YJ20 of Placenta ... 44 0.14
34gb|AC034241.4| Homo sapiens chromosome 5 clone CTD-2360O20, comp... 44 0.14
35dbj|AB169078.1| Macaca fascicularis testis cDNA, clone: QtsA-170... 44 0.14
36gb|BC009454.1|BC009454 Homo sapiens, clone IMAGE:3534054, mRNA, ... 44 0.14
37gb|BC002971.1|BC002971 Homo sapiens, clone IMAGE:3543711, mRNA, ... 44 0.14
38gb|AF275798.1|AF275798 Homo sapiens PNAS-102 mRNA, complete cds 44 0.14
39gb|AC012640.12| Homo sapiens chromosome 5 clone CTD-2256P15, com... 44 0.14
40emb|AJ012489.1|HSA012489 Homo sapiens mRNA activated in tumor su... 44 0.14
41gb|BC006543.2| Homo sapiens chaperonin containing TCP1, subunit ... 44 0.14
42gb|BC040027.1| Homo sapiens chaperonin containing TCP1, subunit ... 44 0.14
43gb|AF053556.1|AF053556 Mesembryanthemum crystallinum chaperonin ... 44 0.14
44ref|NM_112702.2| Arabidopsis thaliana ATP binding / protein bind... 42 0.57
45emb|AJ309379.1|ABE309379 Atropa belladonna partial mRNA for puta... 42 0.57
46gb|AY099877.1| Arabidopsis thaliana chaperonin subunit, putative... 42 0.57
47gb|AY093777.1| Arabidopsis thaliana AT3g18190/MRC8_18 mRNA sequence 42 0.57
48gb|BT003418.1| Arabidopsis thaliana chaperonin subunit, putative... 42 0.57
49gb|AY088570.1| Arabidopsis thaliana clone 7925 mRNA, complete se... 42 0.57
50dbj|AB020749.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 0.57
51gb|U41276.1| Caenorhabditis elegans cosmid C52B11, complete sequ... 40 2.3
52gb|AC019197.7| Homo sapiens BAC clone RP11-361O8 from 2, complet... 40 2.3
53emb|AL805907.5| Mouse DNA sequence from clone RP23-262M20 on chr... 40 2.3
54emb|AL671991.5| Mouse DNA sequence from clone RP23-343L7 on chro... 40 2.3
55ref|XM_817271.1| Trypanosoma brucei TREU927 t-complex protein 1 ... 38 8.9
56gb|AC125185.3| Mus musculus BAC clone RP23-301L11 from chromosom... 38 8.9
57gb|AY308030.1| Gemmata sp. Wa1-1 kynureninase-like gene, complet... 38 8.9
58emb|AJ012318.1|GMA012318 Glycine max cctd gene 38 8.9
59emb|AL121955.20|HSDJ62D2 Human DNA sequence from clone RP1-62D2 ... 38 8.9
60gb|AY145471.1| Rachiplusia ou multiple nucleopolyhedrovirus, com... 38 8.9
61emb|AJ583803.1| Glycine max cctd gene for cytosolic chaperonin d... 38 8.9
62gb|AC008628.6| Homo sapiens chromosome 5 clone CTB-161J7, comple... 38 8.9
63emb|BX247946.6| Zebrafish DNA sequence from clone CH211-231B5 in... 38 8.9
64emb|CT824639.4| Human DNA sequence from clone XX-HCC1954_10I14, ... 38 8.9
65emb|AL590151.8| Zebrafish DNA sequence from clone RP71-46J2 in l... 38 8.9
66gb|AC128703.4| Mus musculus BAC clone RP23-356E22 from 19, compl... 38 8.9 
>ref|XM_465344.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2082

 Score =  109 bits (55), Expect = 3e-21
 Identities = 97/111 (87%)
 Strand = Plus / Minus

                                                                        
Query: 71   ttaccttacagggactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 130
            |||||| |||| ||||||||||||||||||||  ||||||||||| |||||||| || ||
Sbjct: 1692 ttacctcacagtgactatatcatcaatcttcagtatcattctaacacactcgcaagctag 1633

                                                               
Query: 131  cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctccag 181
             | ||||||||| |||||||| ||||| |||||||| || |||||||||||
Sbjct: 1632 tgtgatggcgcttgtgctcaccagcaaaggttgcacaacgttctcctccag 1582
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  109 bits (55), Expect = 3e-21
 Identities = 97/111 (87%)
 Strand = Plus / Plus

                                                                            
Query: 71       ttaccttacagggactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 130
                |||||| |||| ||||||||||||||||||||  ||||||||||| |||||||| || ||
Sbjct: 13560241 ttacctcacagtgactatatcatcaatcttcagtatcattctaacacactcgcaagctag 13560300

                                                                   
Query: 131      cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctccag 181
                 | ||||||||| |||||||| ||||| |||||||| || |||||||||||
Sbjct: 13560301 tgtgatggcgcttgtgctcaccagcaaaggttgcacaacgttctcctccag 13560351
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>dbj|AP005865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0037J12
          Length = 118553

 Score =  109 bits (55), Expect = 3e-21
 Identities = 97/111 (87%)
 Strand = Plus / Plus

                                                                         
Query: 71    ttaccttacagggactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 130
             |||||| |||| ||||||||||||||||||||  ||||||||||| |||||||| || ||
Sbjct: 75546 ttacctcacagtgactatatcatcaatcttcagtatcattctaacacactcgcaagctag 75605

                                                                
Query: 131   cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctccag 181
              | ||||||||| |||||||| ||||| |||||||| || |||||||||||
Sbjct: 75606 tgtgatggcgcttgtgctcaccagcaaaggttgcacaacgttctcctccag 75656
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>dbj|AK067672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119K24, full
            insert sequence
          Length = 2081

 Score =  109 bits (55), Expect = 3e-21
 Identities = 97/111 (87%)
 Strand = Plus / Minus

                                                                        
Query: 71   ttaccttacagggactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 130
            |||||| |||| ||||||||||||||||||||  ||||||||||| |||||||| || ||
Sbjct: 1691 ttacctcacagtgactatatcatcaatcttcagtatcattctaacacactcgcaagctag 1632

                                                               
Query: 131  cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctccag 181
             | ||||||||| |||||||| ||||| |||||||| || |||||||||||
Sbjct: 1631 tgtgatggcgcttgtgctcaccagcaaaggttgcacaacgttctcctccag 1581
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>dbj|AK059413.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D02, full
           insert sequence
          Length = 836

 Score =  109 bits (55), Expect = 3e-21
 Identities = 97/111 (87%)
 Strand = Plus / Minus

                                                                       
Query: 71  ttaccttacagggactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 130
           |||||| |||| ||||||||||||||||||||  ||||||||||| |||||||| || ||
Sbjct: 585 ttacctcacagtgactatatcatcaatcttcagtatcattctaacacactcgcaagctag 526

                                                              
Query: 131 cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctccag 181
            | ||||||||| |||||||| ||||| |||||||| || |||||||||||
Sbjct: 525 tgtgatggcgcttgtgctcaccagcaaaggttgcacaacgttctcctccag 475
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>ref|NM_197338.1| Oryza sativa (japonica cultivar-group) putative cytosolic chaperonin,
            delta-subunit (OSJNBa0026L12.9), mRNA
          Length = 1626

 Score =  101 bits (51), Expect = 7e-19
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                        
Query: 87   atatcatcaatcttcaagatcattctaacgcactcgcacgccagcgagatggcgctcgtg 146
            ||||||||||||||||  ||||| ||||| |||||||| ||||||| || ||||||||||
Sbjct: 1610 atatcatcaatcttcagtatcatcctaacacactcgcaggccagcgtgacggcgctcgtg 1551

                                               
Query: 147  ctcacaagcaacggttgcacgacattctcctccag 181
            ||||| ||||  || ||||||||||||||||||||
Sbjct: 1550 ctcaccagcagtggctgcacgacattctcctccag 1516
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>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete
             sequence
          Length = 152172

 Score =  101 bits (51), Expect = 7e-19
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                         
Query: 87    atatcatcaatcttcaagatcattctaacgcactcgcacgccagcgagatggcgctcgtg 146
             ||||||||||||||||  ||||| ||||| |||||||| ||||||| || ||||||||||
Sbjct: 54753 atatcatcaatcttcagtatcatcctaacacactcgcaggccagcgtgacggcgctcgtg 54694

                                                
Query: 147   ctcacaagcaacggttgcacgacattctcctccag 181
             ||||| ||||  || ||||||||||||||||||||
Sbjct: 54693 ctcaccagcagtggctgcacgacattctcctccag 54659
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  101 bits (51), Expect = 7e-19
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                            
Query: 87       atatcatcaatcttcaagatcattctaacgcactcgcacgccagcgagatggcgctcgtg 146
                ||||||||||||||||  ||||| ||||| |||||||| ||||||| || ||||||||||
Sbjct: 19321628 atatcatcaatcttcagtatcatcctaacacactcgcaggccagcgtgacggcgctcgtg 19321687

                                                   
Query: 147      ctcacaagcaacggttgcacgacattctcctccag 181
                ||||| ||||  || ||||||||||||||||||||
Sbjct: 19321688 ctcaccagcagtggctgcacgacattctcctccag 19321722
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>dbj|AK070291.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052I10, full
            insert sequence
          Length = 1849

 Score =  101 bits (51), Expect = 7e-19
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                        
Query: 87   atatcatcaatcttcaagatcattctaacgcactcgcacgccagcgagatggcgctcgtg 146
            ||||||||||||||||  ||||| ||||| |||||||| ||||||| || ||||||||||
Sbjct: 1664 atatcatcaatcttcagtatcatcctaacacactcgcaggccagcgtgacggcgctcgtg 1605

                                               
Query: 147  ctcacaagcaacggttgcacgacattctcctccag 181
            ||||| ||||  || ||||||||||||||||||||
Sbjct: 1604 ctcaccagcagtggctgcacgacattctcctccag 1570
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>gb|AY104979.1| Zea mays PCO112869 mRNA sequence
          Length = 1979

 Score =  101 bits (51), Expect = 7e-19
 Identities = 96/111 (86%)
 Strand = Plus / Minus

                                                                        
Query: 71   ttaccttacagggactatatcatcaatcttcaagatcattctaacgcactcgcacgccag 130
            |||||| |||| ||| || ||||||||||||||||||||||| || |||||||| || | 
Sbjct: 1762 ttacctaacagtgacaatgtcatcaatcttcaagatcattctgacacactcgcaggctaa 1703

                                                               
Query: 131  cgagatggcgctcgtgctcacaagcaacggttgcacgacattctcctccag 181
            ||  ||||| || |||||||| |||||||| ||||||||||||||||||||
Sbjct: 1702 cgtaatggcacttgtgctcaccagcaacggctgcacgacattctcctccag 1652
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  101 bits (51), Expect = 7e-19
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                            
Query: 87       atatcatcaatcttcaagatcattctaacgcactcgcacgccagcgagatggcgctcgtg 146
                ||||||||||||||||  ||||| ||||| |||||||| ||||||| || ||||||||||
Sbjct: 19332904 atatcatcaatcttcagtatcatcctaacacactcgcaggccagcgtgacggcgctcgtg 19332963

                                                   
Query: 147      ctcacaagcaacggttgcacgacattctcctccag 181
                ||||| ||||  || ||||||||||||||||||||
Sbjct: 19332964 ctcaccagcagtggctgcacgacattctcctccag 19332998
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>ref|XM_517629.1| PREDICTED: Pan troglodytes chaperonin containing TCP1, subunit 5
            (epsilon) (LOC461721), mRNA
          Length = 2130

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 2099 tcatcaatcttcaaaatcattctaac 2074
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>ref|NM_012073.3| Homo sapiens chaperonin containing TCP1, subunit 5 (epsilon) (CCT5),
            mRNA
          Length = 3403

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1766 tcatcaatcttcaaaatcattctaac 1741
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>gb|BC035499.2| Homo sapiens chaperonin containing TCP1, subunit 5 (epsilon), mRNA
            (cDNA clone MGC:20797 IMAGE:4329194), complete cds
          Length = 1952

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1677 tcatcaatcttcaaaatcattctaac 1652
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>dbj|D43950.2|HUMKG1DD Homo sapiens mRNA for KIAA0098 protein, partial cds
          Length = 1891

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1632 tcatcaatcttcaaaatcattctaac 1607
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>emb|CR626727.1| full-length cDNA clone CS0DA005YC18 of Neuroblastoma of Homo sapiens
            (human)
          Length = 1839

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1613 tcatcaatcttcaaaatcattctaac 1588
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>emb|CR624278.1| full-length cDNA clone CS0DG004YM17 of B cells (Ramos cell line) of
            Homo sapiens (human)
          Length = 1572

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1440 tcatcaatcttcaaaatcattctaac 1415
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>dbj|AK124354.1| Homo sapiens cDNA FLJ42363 fis, clone UTERU2026775
          Length = 2551

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 2396 tcatcaatcttcaaaatcattctaac 2421
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>emb|CR621852.1| full-length cDNA clone CS0DK006YF22 of HeLa cells Cot 25-normalized
            of Homo sapiens (human)
          Length = 1858

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1610 tcatcaatcttcaaaatcattctaac 1585
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>emb|CR619740.1| full-length cDNA clone CS0DA004YE17 of Neuroblastoma of Homo
           sapiens (human)
          Length = 660

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 90  tcatcaatcttcaagatcattctaac 115
           |||||||||||||| |||||||||||
Sbjct: 332 tcatcaatcttcaaaatcattctaac 307
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>emb|CR618337.1| full-length cDNA clone CS0DA004YN07 of Neuroblastoma of Homo sapiens
            (human)
          Length = 1826

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1596 tcatcaatcttcaaaatcattctaac 1571
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>emb|CR617351.1| full-length cDNA clone CS0DD007YO16 of Neuroblastoma Cot
            50-normalized of Homo sapiens (human)
          Length = 1786

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1583 tcatcaatcttcaaaatcattctaac 1558
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>emb|CR616179.1| full-length cDNA clone CS0DH002YF13 of T cells (Jurkat cell line) of
            Homo sapiens (human)
          Length = 1816

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1586 tcatcaatcttcaaaatcattctaac 1561
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>emb|CR611397.1| full-length cDNA clone CS0DI073YJ18 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1903

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1612 tcatcaatcttcaaaatcattctaac 1587
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>emb|CR609903.1| full-length cDNA clone CS0DF037YB16 of Fetal brain of Homo sapiens
            (human)
          Length = 1742

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1595 tcatcaatcttcaaaatcattctaac 1570
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>emb|CR606787.1| full-length cDNA clone CS0DG002YD05 of B cells (Ramos cell line) of
            Homo sapiens (human)
          Length = 1871

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1631 tcatcaatcttcaaaatcattctaac 1606
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>emb|CR605385.1| full-length cDNA clone CS0DF030YN09 of Fetal brain of Homo sapiens
            (human)
          Length = 1584

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1374 tcatcaatcttcaaaatcattctaac 1349
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>emb|CR604938.1| full-length cDNA clone CS0DE007YC17 of Placenta of Homo sapiens
            (human)
          Length = 1861

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1549 tcatcaatcttcaaaatcattctaac 1524
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>emb|CR602835.1| full-length cDNA clone CS0DH001YA09 of T cells (Jurkat cell line) of
            Homo sapiens (human)
          Length = 1752

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1610 tcatcaatcttcaaaatcattctaac 1585
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>emb|CR599726.1| full-length cDNA clone CL0BB007ZD11 of Neuroblastoma of Homo sapiens
            (human)
          Length = 1526

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1265 tcatcaatcttcaaaatcattctaac 1240
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>emb|CR596856.1| full-length cDNA clone CS0DH005YD19 of T cells (Jurkat cell line) of
            Homo sapiens (human)
          Length = 1857

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1630 tcatcaatcttcaaaatcattctaac 1605
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>emb|CR594923.1| full-length cDNA clone CS0DM004YE20 of Fetal liver of Homo sapiens
            (human)
          Length = 1742

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1612 tcatcaatcttcaaaatcattctaac 1587
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>emb|CR590360.1| full-length cDNA clone CS0DI081YJ20 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1844

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1612 tcatcaatcttcaaaatcattctaac 1587
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>gb|AC034241.4| Homo sapiens chromosome 5 clone CTD-2360O20, complete sequence
          Length = 77702

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 90    tcatcaatcttcaagatcattctaac 115
             |||||||||||||| |||||||||||
Sbjct: 70533 tcatcaatcttcaaaatcattctaac 70558
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>dbj|AB169078.1| Macaca fascicularis testis cDNA, clone: QtsA-17059, similar to human
            chaperonin containing TCP1, subunit 5 (epsilon)
            (CCT5),mRNA, RefSeq: NM_012073.2
          Length = 1957

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1617 tcatcaatcttcaaaatcattctaac 1592
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>gb|BC009454.1|BC009454 Homo sapiens, clone IMAGE:3534054, mRNA, partial cds
          Length = 1414

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1134 tcatcaatcttcaaaatcattctaac 1109
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>gb|BC002971.1|BC002971 Homo sapiens, clone IMAGE:3543711, mRNA, partial cds
          Length = 1934

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1590 tcatcaatcttcaaaatcattctaac 1565
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>gb|AF275798.1|AF275798 Homo sapiens PNAS-102 mRNA, complete cds
          Length = 907

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 90  tcatcaatcttcaagatcattctaac 115
           |||||||||||||| |||||||||||
Sbjct: 623 tcatcaatcttcaaaatcattctaac 598
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>gb|AC012640.12| Homo sapiens chromosome 5 clone CTD-2256P15, complete sequence
          Length = 145122

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 90     tcatcaatcttcaagatcattctaac 115
              |||||||||||||| |||||||||||
Sbjct: 115014 tcatcaatcttcaaaatcattctaac 115039
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>emb|AJ012489.1|HSA012489 Homo sapiens mRNA activated in tumor suppression, clone TSAP9
          Length = 303

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 90  tcatcaatcttcaagatcattctaac 115
           |||||||||||||| |||||||||||
Sbjct: 124 tcatcaatcttcaaaatcattctaac 99
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>gb|BC006543.2| Homo sapiens chaperonin containing TCP1, subunit 5 (epsilon), mRNA
            (cDNA clone MGC:2389 IMAGE:2824199), complete cds
          Length = 1911

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1630 tcatcaatcttcaaaatcattctaac 1605
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>gb|BC040027.1| Homo sapiens chaperonin containing TCP1, subunit 5 (epsilon), mRNA
            (cDNA clone IMAGE:5394937)
          Length = 1989

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   tcatcaatcttcaagatcattctaac 115
            |||||||||||||| |||||||||||
Sbjct: 1647 tcatcaatcttcaaaatcattctaac 1622
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>gb|AF053556.1|AF053556 Mesembryanthemum crystallinum chaperonin homolog mRNA, partial cds
          Length = 331

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 72  taccttacagggactatatcatcaatcttcaagatcattctaacgcactc 121
           ||||| |||| ||| || |||||||||||||| |||||||| || |||||
Sbjct: 118 tacctcacagtgacaatgtcatcaatcttcaaaatcattctgacacactc 69
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>ref|NM_112702.2| Arabidopsis thaliana ATP binding / protein binding AT3G18190 mRNA,
            complete cds
          Length = 1935

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 90   tcatcaatcttcaagatcattctaacgca 118
            |||||||||||||| ||||| ||||||||
Sbjct: 1692 tcatcaatcttcaaaatcatcctaacgca 1664
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>emb|AJ309379.1|ABE309379 Atropa belladonna partial mRNA for putative cytosolic chaperonine
           delta-subunit
          Length = 402

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 144 gtgctcacaagcaacggttgcacgacattctcctcca 180
           |||||||| ||||| || ||||| |||||||||||||
Sbjct: 105 gtgctcaccagcaatggctgcactacattctcctcca 69
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>gb|AY099877.1| Arabidopsis thaliana chaperonin subunit, putative (At3g18190) mRNA,
            complete cds
          Length = 1908

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 90   tcatcaatcttcaagatcattctaacgca 118
            |||||||||||||| ||||| ||||||||
Sbjct: 1666 tcatcaatcttcaaaatcatcctaacgca 1638
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>gb|AY093777.1| Arabidopsis thaliana AT3g18190/MRC8_18 mRNA sequence
          Length = 1821

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 90   tcatcaatcttcaagatcattctaacgca 118
            |||||||||||||| ||||| ||||||||
Sbjct: 1578 tcatcaatcttcaaaatcatcctaacgca 1550
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>gb|BT003418.1| Arabidopsis thaliana chaperonin subunit, putative (At3g18190) mRNA,
            complete cds
          Length = 1783

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 90   tcatcaatcttcaagatcattctaacgca 118
            |||||||||||||| ||||| ||||||||
Sbjct: 1592 tcatcaatcttcaaaatcatcctaacgca 1564
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>gb|AY088570.1| Arabidopsis thaliana clone 7925 mRNA, complete sequence
          Length = 1873

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 90   tcatcaatcttcaagatcattctaacgca 118
            |||||||||||||| ||||| ||||||||
Sbjct: 1692 tcatcaatcttcaaaatcatcctaacgca 1664
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>dbj|AB020749.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRC8
          Length = 76816

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 90    tcatcaatcttcaagatcattctaacgca 118
             |||||||||||||| ||||| ||||||||
Sbjct: 62815 tcatcaatcttcaaaatcatcctaacgca 62787
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>gb|U41276.1| Caenorhabditis elegans cosmid C52B11, complete sequence
          Length = 41039

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ataacaatacagccctaaaa 48
             ||||||||||||||||||||
Sbjct: 30563 ataacaatacagccctaaaa 30544
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>gb|AC019197.7| Homo sapiens BAC clone RP11-361O8 from 2, complete sequence
          Length = 178255

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     atatcatcaatcttcaagat 106
              ||||||||||||||||||||
Sbjct: 148313 atatcatcaatcttcaagat 148294
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>emb|AL805907.5| Mouse DNA sequence from clone RP23-262M20 on chromosome X, complete
             sequence
          Length = 221439

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    tcaatcttcaagatcattct 112
             ||||||||||||||||||||
Sbjct: 21770 tcaatcttcaagatcattct 21751
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>emb|AL671991.5| Mouse DNA sequence from clone RP23-343L7 on chromosome X, complete
              sequence
          Length = 211866

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     aatacagccctaaaaaggat 53
              ||||||||||||||||||||
Sbjct: 140708 aatacagccctaaaaaggat 140689
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>ref|XM_817271.1| Trypanosoma brucei TREU927 t-complex protein 1 subunit delta
            (Tb10.70.7050) partial mRNA
          Length = 1611

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 162  tgcacgacattctcctcca 180
            |||||||||||||||||||
Sbjct: 1517 tgcacgacattctcctcca 1499
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>gb|AC125185.3| Mus musculus BAC clone RP23-301L11 from chromosome 19, complete sequence
          Length = 168526

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 30     taacaatacagccctaaaa 48
              |||||||||||||||||||
Sbjct: 117976 taacaatacagccctaaaa 117994
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>gb|AY308030.1| Gemmata sp. Wa1-1 kynureninase-like gene, complete sequence
          Length = 1218

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 122 gcacgccagcgagatggcgctcgtgct 148
           ||||||||||||  |||||||||||||
Sbjct: 537 gcacgccagcgaactggcgctcgtgct 563
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>emb|AJ012318.1|GMA012318 Glycine max cctd gene
          Length = 1602

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 87   atatcatcaatcttcaagatcat 109
            ||||||||||||||||| |||||
Sbjct: 1586 atatcatcaatcttcaaaatcat 1564
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>emb|AL121955.20|HSDJ62D2 Human DNA sequence from clone RP1-62D2 on chromosome 6 Contains the 3'
             end of the gene for a novel protein similar to
             synaptonemal complex protein 2 (SYCP2), the ELOVL2 gene
             for elongation of very long chain fatty acids (FEN1/Elo2,
             SUR4/Elo3, yeast)-like 2 (SSC2), a novel gene and a CpG
             island, complete sequence
          Length = 125585

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 87    atatcatcaatcttcaaga 105
             |||||||||||||||||||
Sbjct: 99406 atatcatcaatcttcaaga 99424
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>gb|AY145471.1| Rachiplusia ou multiple nucleopolyhedrovirus, complete genome
          Length = 131526

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 149   cacaagcaacggttgcacg 167
             |||||||||||||||||||
Sbjct: 24478 cacaagcaacggttgcacg 24496
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>emb|AJ583803.1| Glycine max cctd gene for cytosolic chaperonin delta-subunit,
            cultivar Cuc Vang
          Length = 1602

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 87   atatcatcaatcttcaagatcat 109
            ||||||||||||||||| |||||
Sbjct: 1586 atatcatcaatcttcaaaatcat 1564
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>gb|AC008628.6| Homo sapiens chromosome 5 clone CTB-161J7, complete sequence
          Length = 95908

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 93    tcaatcttcaagatcattctaac 115
             ||||||||||| |||||||||||
Sbjct: 81240 tcaatcttcaaaatcattctaac 81218
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>emb|BX247946.6| Zebrafish DNA sequence from clone CH211-231B5 in linkage group 14,
              complete sequence
          Length = 156559

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 23     tcacgcataacaatacagc 41
              |||||||||||||||||||
Sbjct: 118164 tcacgcataacaatacagc 118182
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>emb|CT824639.4| Human DNA sequence from clone XX-HCC1954_10I14, complete sequence
          Length = 114515

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 93   tcaatcttcaagatcattctaac 115
            ||||||||||| |||||||||||
Sbjct: 3692 tcaatcttcaaaatcattctaac 3670
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>emb|AL590151.8| Zebrafish DNA sequence from clone RP71-46J2 in linkage group 14,
             complete sequence
          Length = 137129

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    tcacgcataacaatacagc 41
             |||||||||||||||||||
Sbjct: 24231 tcacgcataacaatacagc 24249
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>gb|AC128703.4| Mus musculus BAC clone RP23-356E22 from 19, complete sequence
          Length = 221568

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 30     taacaatacagccctaaaa 48
              |||||||||||||||||||
Sbjct: 208505 taacaatacagccctaaaa 208487


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 961,952
Number of Sequences: 3902068
Number of extensions: 961952
Number of successful extensions: 62398
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62253
Number of HSP's gapped (non-prelim): 145
length of query: 181
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 159
effective length of database: 17,147,199,772
effective search space: 2726404763748
effective search space used: 2726404763748
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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